##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547762_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2150559 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86822356419889 31.0 31.0 33.0 30.0 34.0 2 32.33828413914708 33.0 31.0 34.0 31.0 34.0 3 32.47214654422408 34.0 31.0 34.0 31.0 34.0 4 36.039471597849676 37.0 35.0 37.0 35.0 37.0 5 35.98741211006069 37.0 35.0 37.0 35.0 37.0 6 36.04180447967249 37.0 35.0 37.0 35.0 37.0 7 36.304676598038 37.0 36.0 37.0 35.0 37.0 8 36.277612471920094 37.0 37.0 37.0 35.0 37.0 9 38.19373056028688 39.0 39.0 39.0 37.0 39.0 10-11 37.60431543612614 39.0 37.5 39.0 35.0 39.0 12-13 36.87306160863292 39.0 35.0 39.0 33.0 39.0 14-15 37.96888088166844 40.0 36.0 41.0 33.0 41.0 16-17 38.14060135062559 40.0 35.0 41.0 34.0 41.0 18-19 38.032286721731424 40.0 36.0 41.0 34.0 41.0 20-21 37.83435516068148 40.0 35.0 41.0 34.0 41.0 22-23 37.663897386679466 39.5 35.0 41.0 33.0 41.0 24-25 37.6067110923253 39.0 35.0 41.0 33.0 41.0 26-27 37.584442928559504 39.5 35.0 41.0 33.0 41.0 28-29 37.57523648502552 40.0 35.0 41.0 33.0 41.0 30-31 37.403904287210906 39.0 35.0 41.0 33.0 41.0 32-33 37.079194758200074 39.0 35.0 41.0 32.5 41.0 34-35 36.79864095800208 39.0 35.0 41.0 31.5 41.0 36-37 36.61558994661388 39.0 35.0 41.0 31.0 41.0 38-39 36.52665818515093 39.0 35.0 41.0 31.0 41.0 40-41 36.37745744246031 39.0 35.0 41.0 31.0 41.0 42-43 36.32801587866224 39.0 35.0 41.0 31.0 41.0 44-45 36.237431756115505 39.0 35.0 41.0 30.0 41.0 46-47 36.13198219625688 38.0 35.0 41.0 30.0 41.0 48-49 36.016433866729535 38.0 35.0 40.5 30.0 41.0 50-51 35.84037359588832 38.0 35.0 40.0 30.0 41.0 52-53 35.659344384413544 38.0 35.0 40.0 29.0 41.0 54-55 35.456647783204275 37.0 35.0 40.0 29.0 41.0 56-57 35.16066566878658 37.0 34.5 40.0 28.0 41.0 58-59 34.8746388729628 36.0 34.0 40.0 27.0 41.0 60-61 34.56704094144824 36.0 34.0 39.0 26.5 41.0 62-63 34.18749776220973 35.5 33.5 39.0 26.0 41.0 64-65 33.868840380570816 35.0 33.5 39.0 26.0 40.0 66-67 33.57550432236456 35.0 33.0 38.0 25.0 40.0 68-69 33.147682997769415 35.0 33.0 37.0 24.0 40.0 70-71 32.88335428137522 35.0 33.0 37.0 24.0 39.0 72-73 32.61721975542173 35.0 33.0 36.0 23.5 39.0 74-75 32.30055046153117 35.0 33.0 36.0 22.5 38.5 76-77 30.251593887914723 33.0 29.5 34.5 19.0 36.0 78-79 31.344875448662417 34.0 31.5 35.0 20.0 37.0 80-81 31.56152539874516 35.0 32.0 35.0 20.0 36.5 82-83 31.4067563363758 35.0 32.0 35.0 19.5 36.0 84-85 31.20807264529827 35.0 32.0 35.0 19.0 36.0 86 30.779974880949556 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 9.0 10 5.0 11 9.0 12 29.0 13 69.0 14 261.0 15 798.0 16 1990.0 17 4723.0 18 10239.0 19 15319.0 20 17547.0 21 17315.0 22 15043.0 23 14030.0 24 14534.0 25 16282.0 26 19338.0 27 23705.0 28 29204.0 29 36285.0 30 46029.0 31 57171.0 32 71662.0 33 96047.0 34 232030.0 35 220459.0 36 183365.0 37 321724.0 38 456738.0 39 227757.0 40 842.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.363323210383907 26.24717573430908 31.0546234723158 14.334877582991211 2 30.440597072668083 25.46496050561738 30.712665869664583 13.381776552049956 3 27.999464325321927 24.685907245511515 33.520726471582506 13.793901957584051 4 26.310229107873813 26.847391771162755 32.60022161679824 14.242157504165196 5 24.211983953939416 30.935863652194616 30.991802596441204 13.860349797424762 6 22.94487154270122 39.01501888578737 26.922814021842694 11.117295549668714 7 89.20778272067868 2.9794113995477454 6.404706869237255 1.4080990105363302 8 90.38770849811607 2.3869607855445953 5.940920476955061 1.2844102393842716 9 86.9772463810572 4.795776353961923 6.469015730328718 1.7579615346521533 10-11 40.279666821510126 29.031777319292335 19.93235247207819 10.75620338711935 12-13 28.630928051729803 25.92370169802363 28.576081846626856 16.86928840361971 14-15 15.313088364467099 32.19555938711749 36.013938701519 16.47741354689641 16-17 21.0599430194661 27.06017365717472 33.04057224191478 18.839311081444407 18-19 22.946661774915267 28.222104113395634 31.58211423169511 17.249119879993994 20-21 25.247714663954813 28.738946478566735 30.574027497036816 15.439311360441636 22-23 20.5530515554328 25.503531872410846 32.66432122996858 21.279095342187777 24-25 18.386173083370416 28.26293070778342 35.720433617492006 17.630462591354153 26-27 17.452439110017444 35.441180641870325 29.694511985023432 17.411868263088806 28-29 15.807982947689414 30.17324797878133 35.8627222038549 18.15604686967435 30-31 21.796100455741975 29.55354863549431 31.347035817199153 17.303315091564563 32-33 24.09773458900686 29.31584299709982 29.147537919210777 17.438884494682547 34-35 19.28698538380021 29.725085431276238 30.304120928558575 20.683808256364973 36-37 21.556930081899637 29.931985125727778 31.0762457574984 17.434839034874187 38-39 19.51332188514707 31.27696101339233 29.047935908756745 20.161781192703852 40-41 20.025328298363355 27.700309547424645 29.600420169825615 22.673941984386385 42-43 20.195656106156584 26.93590364179732 30.18089715278679 22.687543099259308 44-45 18.94691101243909 32.19246716783869 28.65815353124467 20.202468288477554 46-47 20.721612380780996 31.03118770515015 28.634485266388875 19.612714647679972 48-49 20.55537653233415 28.02510882054387 31.72082235362992 19.698692293492066 50-51 18.839032084216242 31.431618476870433 29.509281075292513 20.220068363620808 52-53 21.218808691135653 27.730069251761986 31.01605210552233 20.03506995158003 54-55 21.447214421924716 28.614164968271037 30.71919905475739 19.21942155504685 56-57 21.969194986047814 26.62554247523551 30.372544998765438 21.03271753995124 58-59 22.612609093728654 28.205852524855164 29.37557165369562 19.805966727720563 60-61 22.89774426091077 29.288617517584964 28.24777185838659 19.56586636311768 62-63 22.15040368573938 27.349842529314472 31.209745931174176 19.290007853771975 64-65 19.520227066544095 30.96071765527009 30.660911883840434 18.85814339434538 66-67 18.762889090696884 30.135815850669523 27.3327306993205 23.76856435931309 68-69 17.74396796367828 32.53282053642797 27.118530577398715 22.604680922495035 70-71 19.193079566754502 30.514810335359314 29.729944633000073 20.562165464886107 72-73 21.64293097748074 30.08371311831017 28.49196418233585 19.78139172187324 74-75 20.689667198156386 32.24887110746555 26.35779813527553 20.70366355910254 76-77 24.125146066673828 29.383871821233456 27.22908322905812 19.261898883034597 78-79 19.11079863421557 29.700812672426096 30.594952289149006 20.593436404209324 80-81 17.265394718303472 29.326677389460137 31.27768175623175 22.13024613600464 82-83 18.45236517575198 27.841668143027 32.07331210164427 21.63265457957675 84-85 17.428003602784205 27.569785344182606 31.09863528505844 23.903575767974743 86 18.300916180397746 28.159422736135113 30.808826914304603 22.730834169162527 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1493.0 1 1818.0 2 5933.5 3 6076.0 4 2680.5 5 3487.5 6 4611.0 7 5180.0 8 5941.0 9 6742.0 10 6611.5 11 6358.0 12 5939.5 13 5835.5 14 6067.0 15 5913.5 16 5720.5 17 5970.0 18 6619.5 19 6923.5 20 7209.0 21 7551.0 22 8916.5 23 10879.0 24 12988.5 25 14863.0 26 18131.5 27 22054.0 28 26928.0 29 30786.0 30 33052.5 31 38896.5 32 44782.5 33 47275.0 34 51262.5 35 59580.0 36 64094.0 37 65564.5 38 69836.5 39 74476.0 40 85069.0 41 101718.5 42 111538.0 43 113463.0 44 116681.0 45 119200.5 46 120458.5 47 119858.5 48 115485.5 49 102161.5 50 90654.0 51 81023.0 52 66772.0 53 58630.0 54 51090.5 55 44877.0 56 39285.0 57 35889.0 58 32395.5 59 25098.5 60 17898.0 61 12780.0 62 9912.0 63 6942.0 64 5119.0 65 4109.0 66 2675.0 67 1572.5 68 760.0 69 583.5 70 421.0 71 301.0 72 285.5 73 194.5 74 173.5 75 136.5 76 46.5 77 33.0 78 15.0 79 12.0 80 12.0 81 11.0 82 7.5 83 7.0 84 6.5 85 2.5 86 1.0 87 2.0 88 3.5 89 3.0 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2150559.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.056072917104316 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94094085174419 12.674815024604236 2 8.750775702535588 2.810061855222723 3 2.6844714035740513 1.2930620579899899 4 1.3938598117820726 0.8951965909677704 5 0.8475946864896942 0.680452104521435 6 0.6083716058769112 0.586083531879332 7 0.46558433290440476 0.5232819198722146 8 0.37318272338203323 0.47934792144203964 9 0.3212120337867375 0.464166345269811 >10 2.780656745397767 10.168168661720665 >50 1.0386426981012415 12.150845270799874 >100 1.7868256380103031 55.49226983650898 >500 0.005838345492583246 0.6326573404721622 >1k 0.0017515036477749736 0.4470034861522456 >5k 0.0 0.0 >10k+ 2.919172746291623E-4 0.7025880525765085 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14990 0.6970280750260747 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2367 0.11006440651012132 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.64995380270897E-5 0.0 0.0 0.024272758850140824 0.0 2 4.64995380270897E-5 0.0 0.0 0.11624884506772425 0.0 3 4.64995380270897E-5 0.0 0.0 0.18520765996189828 0.0 4 4.64995380270897E-5 0.0 0.0 0.3028514911704352 0.0 5 4.64995380270897E-5 0.0 0.0 0.5765477719978852 0.0 6 4.64995380270897E-5 0.0 0.0 0.7707298427990118 0.0 7 4.64995380270897E-5 0.0 0.0 0.9073919850606285 0.0 8 4.64995380270897E-5 0.0 0.0 1.1550020250548811 0.0 9 4.64995380270897E-5 0.0 0.0 1.2556270253455033 0.0 10 4.64995380270897E-5 0.0 0.0 1.4273033197415184 0.0 11 4.64995380270897E-5 0.0 0.0 1.811296504769225 0.0 12 4.64995380270897E-5 0.0 0.0 2.0695084394336543 0.0 13 4.64995380270897E-5 0.0 0.0 2.1607870325808314 0.0 14 4.64995380270897E-5 0.0 0.0 2.1973356694701236 0.0 15 4.64995380270897E-5 0.0 0.0 2.2548090984716067 0.0 16 4.64995380270897E-5 0.0 0.0 2.3699419546266807 0.0 17 4.64995380270897E-5 0.0 0.0 2.5203214606062887 0.0 18 4.64995380270897E-5 0.0 0.0 2.6884172905742183 0.0 19 4.64995380270897E-5 0.0 0.0 2.823591447618968 0.0 20 9.29990760541794E-5 0.0 0.0 2.95537113838774 0.0 21 9.29990760541794E-5 0.0 0.0 3.1105400967841383 0.0 22 9.29990760541794E-5 0.0 0.0 3.2924462895461133 0.0 23 9.29990760541794E-5 0.0 0.0 3.4743524823080882 0.0 24 9.29990760541794E-5 0.0 0.0 3.6101776328852173 0.0 25 9.29990760541794E-5 0.0 0.0 3.727030971947294 0.0 26 9.29990760541794E-5 0.0 0.0 3.8404433451953657 0.0 27 9.29990760541794E-5 0.0 0.0 3.9755710027020883 0.0 28 9.29990760541794E-5 0.0 0.0 4.101538251217474 0.0 29 9.29990760541794E-5 0.0 0.0 4.257032706380062 0.0 30 9.29990760541794E-5 0.0 0.0 4.421687570533987 0.0 31 9.29990760541794E-5 0.0 0.0 4.575787039555762 0.0 32 9.29990760541794E-5 0.0 0.0 4.715471651789139 0.0 33 9.29990760541794E-5 0.0 0.0 4.854877266794355 0.0 34 9.29990760541794E-5 0.0 0.0 5.012929196548432 0.0 35 9.29990760541794E-5 0.0 0.0 5.195951378223057 0.0 36 9.29990760541794E-5 0.0 0.0 5.360513243300928 0.0 37 9.29990760541794E-5 0.0 0.0 5.5406059540798465 0.0 38 9.29990760541794E-5 0.0 0.0 5.724883623281203 0.0 39 9.29990760541794E-5 0.0 0.0 5.987001519139907 0.0 40 9.29990760541794E-5 0.0 0.0 6.175836143067919 0.0 41 9.29990760541794E-5 0.0 0.0 6.379736617316707 0.0 42 9.29990760541794E-5 0.0 0.0 6.585357574472497 0.0 43 9.29990760541794E-5 0.0 0.0 6.771727722885073 0.0 44 9.29990760541794E-5 0.0 0.0 6.958795364368055 0.0 45 1.394986140812691E-4 0.0 0.0 7.149768967045312 0.0 46 1.394986140812691E-4 0.0 0.0 7.357389404336268 0.0 47 1.394986140812691E-4 0.0 0.0 7.586678626347847 0.0 48 1.394986140812691E-4 0.0 0.0 7.798484022061241 0.0 49 1.394986140812691E-4 0.0 0.0 8.027215249616495 0.0 50 1.394986140812691E-4 0.0 0.0 8.24604207557198 0.0 51 1.394986140812691E-4 0.0 0.0 8.479423256929943 0.0 52 1.394986140812691E-4 0.0 0.0 8.720151365296186 0.0 53 1.394986140812691E-4 0.0 0.0 8.959344988907535 0.0 54 1.394986140812691E-4 0.0 0.0 9.195934638389367 0.0 55 1.394986140812691E-4 0.0 0.0 9.432105792028956 0.0 56 1.394986140812691E-4 0.0 0.0 9.670322925341736 0.0 57 1.394986140812691E-4 0.0 0.0 9.91951394962891 0.0 58 1.394986140812691E-4 0.0 0.0 10.168379477149895 0.0 59 1.394986140812691E-4 0.0 0.0 10.422499452467939 0.0 60 1.394986140812691E-4 0.0 0.0 10.68071138713237 0.0 61 1.859981521083588E-4 0.0 0.0 10.964079571869453 0.0 62 1.859981521083588E-4 0.0 0.0 11.270558027006002 0.0 63 1.859981521083588E-4 0.0 0.0 11.590846844936596 0.0 64 1.859981521083588E-4 0.0 0.0 11.877191000107414 0.0 65 1.859981521083588E-4 0.0 0.0 12.14856230403351 0.0 66 1.859981521083588E-4 0.0 0.0 12.415795149075194 0.0 67 1.859981521083588E-4 0.0 0.0 12.695582869384193 0.0 68 1.859981521083588E-4 0.0 0.0 13.019870647585115 0.0 69 1.859981521083588E-4 0.0 0.0 13.458686787946762 0.0 70 2.324976901354485E-4 0.0 0.0 13.756097833168027 0.0 71 2.324976901354485E-4 0.0 0.0 14.065087263358038 0.0 72 2.324976901354485E-4 0.0 0.0 14.36338179980182 0.0 73 2.789972281625382E-4 0.0 0.0 14.667860774803202 0.0 74 2.789972281625382E-4 0.0 0.0 15.002331951832058 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 35 1.2914825E-9 80.0 2 TTTCGCG 160 0.0 72.50001 1 CGAGGGA 1455 0.0 72.30241 4 CGTTTTT 7535 0.0 71.29395 1 TAGGGAC 2275 0.0 68.74725 5 TACGGGA 780 0.0 68.20513 4 TTACCGG 155 0.0 67.09677 2 TTCGCGG 275 0.0 66.90909 2 TTAGGGA 3405 0.0 65.55066 4 TAACGGG 500 0.0 64.8 3 ATAGCGG 625 0.0 64.63999 2 TGCGCGG 385 0.0 64.41558 2 TATAGCG 355 0.0 64.22535 1 ACGGGAC 530 0.0 64.15094 5 TAGGTCG 50 3.0013325E-10 64.0 1 ACGGGGT 1025 0.0 63.609756 5 CCGATCC 1175 0.0 63.31915 80 TAAGGGA 3315 0.0 62.98643 4 GACGGGT 235 0.0 62.978725 4 TAGCGGG 1625 0.0 62.76923 3 >>END_MODULE