##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547760_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1716363 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.767081322540744 31.0 31.0 33.0 30.0 34.0 2 32.21247370165868 33.0 31.0 34.0 31.0 34.0 3 32.384887113040776 34.0 31.0 34.0 31.0 34.0 4 35.986746393391144 37.0 35.0 37.0 35.0 37.0 5 35.93276888397151 37.0 35.0 37.0 35.0 37.0 6 35.993631300604825 37.0 35.0 37.0 35.0 37.0 7 36.19535378005702 37.0 35.0 37.0 35.0 37.0 8 36.13148442374952 37.0 35.0 37.0 35.0 37.0 9 37.99229941451779 39.0 39.0 39.0 35.0 39.0 10-11 37.53095178584017 39.0 37.0 39.0 35.0 39.0 12-13 36.7454777922852 39.0 35.0 39.0 33.0 39.0 14-15 37.80151459801918 40.0 35.0 41.0 33.0 41.0 16-17 37.97681084945317 40.0 35.0 41.0 33.5 41.0 18-19 37.87028618072051 40.0 36.0 41.0 33.5 41.0 20-21 37.69186588151807 40.0 35.0 41.0 33.5 41.0 22-23 37.499561281617005 39.0 35.0 41.0 33.0 41.0 24-25 37.40160239995852 39.0 35.0 41.0 33.0 41.0 26-27 37.38941995370443 39.0 35.0 41.0 33.0 41.0 28-29 37.382389389657085 39.0 35.0 41.0 33.0 41.0 30-31 37.23591046882274 39.0 35.0 41.0 33.0 41.0 32-33 36.94745750170564 39.0 35.0 41.0 32.0 41.0 34-35 36.665316427818595 39.0 35.0 41.0 31.0 41.0 36-37 36.480015591107474 39.0 35.0 41.0 31.0 41.0 38-39 36.40099297176646 39.0 35.0 41.0 31.0 41.0 40-41 36.24099214443565 38.5 35.0 41.0 30.0 41.0 42-43 36.202745864365525 38.0 35.0 41.0 30.0 41.0 44-45 36.08807723074897 38.0 35.0 41.0 30.0 41.0 46-47 35.984845571711816 38.0 35.0 40.5 30.0 41.0 48-49 35.89713568749734 38.0 35.0 40.0 30.0 41.0 50-51 35.718320658275665 38.0 35.0 40.0 29.0 41.0 52-53 35.528051758281904 37.0 35.0 40.0 29.0 41.0 54-55 35.32723409908044 37.0 34.5 40.0 28.5 41.0 56-57 35.02307553821657 36.5 34.0 40.0 27.5 41.0 58-59 34.74361658926462 36.0 34.0 40.0 27.0 41.0 60-61 34.44410011168966 35.5 34.0 39.0 26.5 41.0 62-63 34.07668803161103 35.0 33.5 39.0 26.0 41.0 64-65 33.83730539518738 35.0 33.0 38.5 26.0 40.0 66-67 33.580009881359594 35.0 33.0 38.0 25.5 40.0 68-69 33.209250607243334 35.0 33.0 37.0 25.0 40.0 70-71 32.992643164645244 35.0 33.0 37.0 25.0 39.0 72-73 32.76621145993009 35.0 33.0 36.0 25.0 39.0 74-75 32.483182170671355 35.0 33.0 36.0 24.0 38.5 76-77 30.44191001553867 33.0 29.5 34.5 19.5 36.0 78-79 31.56689144429238 34.0 31.5 35.0 22.5 37.0 80-81 31.839379839812437 35.0 32.0 35.0 23.0 36.5 82-83 31.705367396057827 35.0 32.0 35.0 23.0 36.0 84-85 31.542908172688414 35.0 32.0 35.0 22.5 36.0 86 31.1357772219513 34.0 31.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 9.0 10 21.0 11 34.0 12 41.0 13 84.0 14 249.0 15 809.0 16 1816.0 17 3724.0 18 6979.0 19 11033.0 20 13274.0 21 13822.0 22 12803.0 23 12116.0 24 12291.0 25 13764.0 26 16165.0 27 19691.0 28 23977.0 29 29628.0 30 36232.0 31 45613.0 32 57346.0 33 79131.0 34 193171.0 35 175751.0 36 151625.0 37 262436.0 38 350518.0 39 171551.0 40 654.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.545467945883246 24.65917757490694 27.94933239646858 13.84602208274124 2 30.659423443642165 24.100146647300132 31.335387677315346 13.905042231742353 3 29.715508898758596 24.894442492642874 31.44958263490882 13.940465973689713 4 27.368161630144673 27.083839490830318 30.47018608534442 15.077812793680593 5 24.32416685747712 31.31715144174047 29.353464273000522 15.005217427781886 6 22.61980711539459 40.742546885478184 25.527292303551175 11.110353695576054 7 87.09189140059533 4.120981400787596 6.347841336593715 2.4392858620233597 8 87.29866584166636 3.8818711426429022 6.5840384580651055 2.2354245576256306 9 82.44252527000407 6.414493903678883 7.852185114687278 3.290795711629766 10-11 40.051055633336304 28.434952279908153 19.489321314896674 12.024670771858867 12-13 30.075106489711096 26.027040899856267 27.640102938597487 16.257749671835153 14-15 16.488207914060137 31.412090565923407 34.46083375136845 17.638867768648005 16-17 21.93877402390986 25.521232979270703 32.19339382170322 20.34659917511622 18-19 24.004304450748474 27.44498104421967 30.215694465564685 18.335020039467175 20-21 27.08547084736737 26.448309594182582 29.30143565201534 17.16478390643471 22-23 22.46136161173365 24.490769143823304 30.841144909322793 22.20672433512025 24-25 19.32446691055447 26.63375987480504 34.58641907335453 19.455354141285962 26-27 18.419384477526023 33.5143847775791 28.960190822104646 19.106039922790224 28-29 17.40645772485191 27.936893302873578 35.35708938027678 19.29955959199773 30-31 22.785651986205714 28.493098487907275 30.18073682548505 18.540512700401955 32-33 25.96577763561671 27.600280360273437 28.033988148194762 18.399953855915093 34-35 20.516668094103636 28.173090424344966 30.005103815451626 21.30513766609977 36-37 22.880387190821523 29.161896405364136 29.7086338962096 18.249082507604744 38-39 19.769011566900474 30.820549033042543 28.51803493783075 20.89240446222623 40-41 21.418808259092046 27.005534377051944 28.475765324701126 23.099892039154888 42-43 21.044528459306104 26.23844722823785 28.544049248323343 24.172975064132704 44-45 19.31881542540826 31.23150522354537 28.345664640871426 21.104014710174944 46-47 21.001355773807756 30.24194182699114 27.789342930370793 20.967359468830313 48-49 20.895638043933598 26.880881258801313 31.439211868351858 20.78426882891323 50-51 19.398227531122494 30.840504019254666 28.805561527485736 20.9557069221371 52-53 22.154637451401598 26.55018198364798 29.667675194582966 21.62750537036746 54-55 21.83276498036837 26.775804418995282 30.725784697060003 20.66564590357634 56-57 23.038832694482462 26.008921189748325 28.445235652364914 22.507010463404303 58-59 23.606107798874714 27.225650984086702 28.441419443322886 20.726821773715702 60-61 24.248075727570452 28.853599151228497 26.521138011015154 20.377187110185897 62-63 23.356626774173062 25.731881892117226 30.448774530795642 20.46271680291407 64-65 20.193397317467227 29.981507408397874 29.814031181049693 20.011064093085203 66-67 19.864008953816878 28.628967182350117 25.731270133415833 25.77575373041717 68-69 18.702308311237193 31.59529773130742 26.103598131630662 23.598795825824723 70-71 19.599962245748713 29.580718064884877 28.807455066323385 22.011864623043028 72-73 22.293448413884477 29.917156219284614 27.454681789341766 20.334713577489143 74-75 21.38326799167775 31.639053044140432 25.33109254860423 21.64658641557759 76-77 25.042837674780916 28.44943056917447 26.461826548346707 20.045905207697906 78-79 19.697843637971687 29.271226424713188 29.55866562026797 21.472264317047152 80-81 17.38239521593043 28.754261190668874 30.389870907261457 23.47347268613924 82-83 19.789432654980327 27.714184004199577 29.844823035686506 22.65156030513359 84-85 18.44032993020707 27.61912835454971 28.72498416710218 25.21555754814104 86 18.55895285554396 27.43335762889319 30.866605723847464 23.14108379171539 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 680.0 1 1045.5 2 3461.5 3 3601.5 4 1768.5 5 2074.0 6 2502.5 7 2703.0 8 2820.5 9 2874.0 10 2870.5 11 2997.5 12 3110.5 13 3191.5 14 3226.0 15 3190.5 16 3199.5 17 3715.0 18 3783.5 19 3546.5 20 4038.0 21 4364.0 22 4773.0 23 5653.0 24 7051.0 25 8522.0 26 11449.0 27 15090.0 28 17242.5 29 18137.0 30 21423.5 31 28024.5 32 32525.5 33 35750.0 34 37910.5 35 42057.5 36 46082.0 37 49604.5 38 53252.0 39 56192.0 40 66840.5 41 75355.0 42 79897.0 43 83758.0 44 83196.5 45 87343.5 46 92699.5 47 94958.5 48 97018.0 49 88995.5 50 80525.0 51 72706.5 52 59156.5 53 51542.0 54 47081.5 55 45339.0 56 42156.0 57 38138.0 58 34878.0 59 27139.5 60 19770.5 61 16878.0 62 15066.5 63 11412.5 64 9568.0 65 7951.0 66 5721.0 67 4228.0 68 3041.0 69 2112.5 70 1151.0 71 811.0 72 704.0 73 541.0 74 313.5 75 130.5 76 135.5 77 104.5 78 41.5 79 26.0 80 25.0 81 21.0 82 17.0 83 13.0 84 10.0 85 9.0 86 8.0 87 5.0 88 2.5 89 2.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1716363.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.63347515423413 #Duplication Level Percentage of deduplicated Percentage of total 1 81.52691617656963 12.745490184477298 2 7.702488500551382 2.4083332519828824 3 2.2589453822861634 1.0594549952622794 4 1.0429251354338724 0.6521817677012683 5 0.6232473933211125 0.4871761319213399 6 0.41476155919667257 0.38904987183795536 7 0.31470131188997885 0.34439125983058094 8 0.24072657191563013 0.30107143048055673 9 0.20254058856116045 0.2849771933095373 >10 2.4983132615348547 9.632031194052287 >50 1.2070576632520922 13.778870513231642 >100 1.9602496389661277 56.49605477310495 >500 0.005626434095769598 0.5905682582561076 >1k 0.0011252868191539195 0.3280934768089487 >5k 3.750956063846398E-4 0.5022556977423852 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8565 0.4990203121367683 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 2265 0.13196509130061648 No Hit ACCATACGGAAAGAGTTCCGAACCCGCATGGTTATGAACAATGGACTCAA 2077 0.12101169740899798 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1652546693211168E-4 0.0 0.0 0.022897254252159945 0.0 2 1.1652546693211168E-4 0.0 0.0 0.068866550956878 0.0 3 1.1652546693211168E-4 0.0 0.0 0.09479346734927285 0.0 4 1.1652546693211168E-4 0.0 0.0 0.1515996324786773 0.0 5 1.1652546693211168E-4 0.0 0.0 0.28001069703786435 0.0 6 1.1652546693211168E-4 0.0 0.0 0.37474590165367117 0.0 7 1.1652546693211168E-4 0.0 0.0 0.4387766457328665 0.0 8 1.1652546693211168E-4 0.0 0.0 0.5716156780354739 0.0 9 1.1652546693211168E-4 0.0 0.0 0.6109430231250615 0.0 10 1.1652546693211168E-4 0.0 0.0 0.7025903028671674 0.0 11 1.1652546693211168E-4 0.0 0.0 0.8625215062314907 0.0 12 1.1652546693211168E-4 0.0 0.0 0.9852228229110043 0.0 13 1.1652546693211168E-4 0.0 0.0 1.0285120338762836 0.0 14 1.1652546693211168E-4 0.0 0.0 1.0462821675834308 0.0 15 1.1652546693211168E-4 0.0 0.0 1.0805989175949378 0.0 16 1.1652546693211168E-4 0.0 0.0 1.1489411039506212 0.0 17 1.1652546693211168E-4 0.0 0.0 1.2347038476126553 0.0 18 1.1652546693211168E-4 0.0 0.0 1.3254189236193044 0.0 19 1.1652546693211168E-4 0.0 0.0 1.389915769566228 0.0 20 1.1652546693211168E-4 0.0 0.0 1.4749793604266697 0.0 21 1.1652546693211168E-4 0.0 0.0 1.568141471238893 0.0 22 1.1652546693211168E-4 0.0 0.0 1.674704010748309 0.0 23 1.1652546693211168E-4 0.0 0.0 1.7791690918529472 0.0 24 1.1652546693211168E-4 0.0 0.0 1.8568915782966657 0.0 25 1.1652546693211168E-4 0.0 0.0 1.9329827082033346 0.0 26 1.1652546693211168E-4 0.0 0.0 2.0056945995689723 0.0 27 1.1652546693211168E-4 0.0 0.0 2.0820187804095056 0.0 28 1.1652546693211168E-4 0.0 0.0 2.1600908432540202 0.0 29 1.1652546693211168E-4 0.0 0.0 2.257680921809664 0.0 30 1.1652546693211168E-4 0.0 0.0 2.371526303002337 0.0 31 1.1652546693211168E-4 0.0 0.0 2.469524220692243 0.0 32 1.1652546693211168E-4 0.0 0.0 2.5649585781096422 0.0 33 1.1652546693211168E-4 0.0 0.0 2.6579459007214674 0.0 34 1.1652546693211168E-4 0.0 0.0 2.7690529334412357 0.0 35 1.1652546693211168E-4 0.0 0.0 2.8907637836518267 0.0 36 1.1652546693211168E-4 0.0 0.0 2.9972680604277766 0.0 37 1.1652546693211168E-4 0.0 0.0 3.111637806221644 0.0 38 1.1652546693211168E-4 0.0 0.0 3.2412141254501523 0.0 39 1.1652546693211168E-4 0.0 0.0 3.448571193855845 0.0 40 1.1652546693211168E-4 0.0 0.0 3.5970246387273557 0.0 41 1.1652546693211168E-4 0.0 0.0 3.733184646837528 0.0 42 1.1652546693211168E-4 0.0 0.0 3.866664569208262 0.0 43 1.1652546693211168E-4 0.0 0.0 3.9956582611021094 0.0 44 1.1652546693211168E-4 0.0 0.0 4.130478226342563 0.0 45 1.1652546693211168E-4 0.0 0.0 4.258423189034021 0.0 46 1.1652546693211168E-4 0.0 0.0 4.405827904703143 0.0 47 1.1652546693211168E-4 0.0 0.0 4.577062078359881 0.0 48 1.1652546693211168E-4 0.0 0.0 4.715028231207501 0.0 49 1.1652546693211168E-4 0.0 0.0 4.8644721425479345 0.0 50 1.1652546693211168E-4 0.0 0.0 5.015372622225019 0.0 51 1.1652546693211168E-4 0.0 0.0 5.175828190190536 0.0 52 1.1652546693211168E-4 0.0 0.0 5.364366395686694 0.0 53 1.1652546693211168E-4 0.0 0.0 5.5237732344498225 0.0 54 1.1652546693211168E-4 0.0 0.0 5.687491515489439 0.0 55 1.1652546693211168E-4 0.0 0.0 5.865542428961706 0.0 56 1.1652546693211168E-4 0.0 0.0 6.04703084370847 0.0 57 1.1652546693211168E-4 0.0 0.0 6.216284084427362 0.0 58 1.1652546693211168E-4 0.0 0.0 6.38396423134267 0.0 59 1.1652546693211168E-4 0.0 0.0 6.565044806955172 0.0 60 1.1652546693211168E-4 0.0 0.0 6.763604202607491 5.826273346605584E-5 61 1.1652546693211168E-4 0.0 0.0 6.965659362267772 5.826273346605584E-5 62 1.1652546693211168E-4 0.0 0.0 7.19317533645272 5.826273346605584E-5 63 1.1652546693211168E-4 0.0 0.0 7.432227331863947 5.826273346605584E-5 64 1.1652546693211168E-4 0.0 0.0 7.639700925736572 5.826273346605584E-5 65 1.1652546693211168E-4 0.0 0.0 7.842047399064184 5.826273346605584E-5 66 1.747882003981675E-4 0.0 0.0 8.03856759904519 5.826273346605584E-5 67 1.747882003981675E-4 0.0 0.0 8.227513643675609 5.826273346605584E-5 68 2.3305093386422336E-4 0.0 0.0 8.469420513026673 5.826273346605584E-5 69 2.3305093386422336E-4 0.0 0.0 8.790040335290378 5.826273346605584E-5 70 3.49576400796335E-4 0.0 0.0 9.01557537653748 5.826273346605584E-5 71 4.078391342623909E-4 0.0 0.0 9.232545795965073 5.826273346605584E-5 72 4.078391342623909E-4 0.0 0.0 9.442932526511001 5.826273346605584E-5 73 4.078391342623909E-4 0.0 0.0 9.66363176088042 5.826273346605584E-5 74 4.078391342623909E-4 0.0 0.0 9.903790748227502 5.826273346605584E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGCG 130 0.0 73.84615 1 ACGGGTA 50 3.6379788E-12 72.0 5 ATCGTAG 45 1.1823431E-10 71.11111 1 TAACGGG 485 0.0 69.27835 3 TACGGGA 775 0.0 69.16129 4 CGTTTTT 4485 0.0 68.94091 1 ATAGCGG 385 0.0 68.571434 2 TAGCGGG 1230 0.0 67.64227 3 ACGGGAT 1065 0.0 66.10329 5 TAGCACG 80 0.0 65.0 1 CGGGTAG 105 0.0 64.76191 6 ACGGGAC 540 0.0 64.44444 5 ATAGGGA 2190 0.0 63.744293 4 CGGGATC 685 0.0 63.649635 6 CGTTAGG 235 0.0 62.978725 2 AGGGATT 3940 0.0 62.33503 6 GCGAGGG 1680 0.0 61.904766 3 CGAGGGA 1620 0.0 61.7284 4 TGCACGG 365 0.0 61.369865 2 CGGGATA 555 0.0 61.261265 6 >>END_MODULE