##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547755_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1423499 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76332403464983 31.0 31.0 33.0 30.0 34.0 2 32.2143570174619 33.0 31.0 34.0 31.0 34.0 3 32.36322399945487 34.0 31.0 34.0 30.0 34.0 4 35.968145393849944 37.0 35.0 37.0 35.0 37.0 5 35.90752013173174 37.0 35.0 37.0 35.0 37.0 6 35.970357548547625 37.0 35.0 37.0 35.0 37.0 7 36.222548804038496 37.0 35.0 37.0 35.0 37.0 8 36.187931287622966 37.0 35.0 37.0 35.0 37.0 9 38.07263510546899 39.0 39.0 39.0 37.0 39.0 10-11 37.50343695359112 39.0 37.5 39.0 35.0 39.0 12-13 36.54947632558927 39.0 35.0 39.0 33.0 39.0 14-15 37.505836674279365 40.0 35.0 41.0 33.0 41.0 16-17 37.75005567267697 40.0 35.0 41.0 33.0 41.0 18-19 37.65095058022521 39.0 35.5 41.0 33.0 41.0 20-21 37.447571441918825 39.0 35.0 41.0 33.0 41.0 22-23 37.258867761761685 39.0 35.0 41.0 33.0 41.0 24-25 37.18959444298872 39.0 35.0 41.0 33.0 41.0 26-27 37.1820155827296 39.0 35.0 41.0 33.0 41.0 28-29 37.19150733509472 39.0 35.0 41.0 33.0 41.0 30-31 37.03074923129556 39.0 35.0 41.0 32.5 41.0 32-33 36.7197058094175 39.0 35.0 41.0 31.5 41.0 34-35 36.43818330746983 38.5 35.0 41.0 31.0 41.0 36-37 36.22572794220439 38.0 35.0 41.0 30.0 41.0 38-39 36.14777671076692 38.0 35.0 41.0 30.0 41.0 40-41 36.00591851487075 38.0 35.0 41.0 30.0 41.0 42-43 35.9539704629227 38.0 35.0 41.0 30.0 41.0 44-45 35.8342085242069 38.0 35.0 40.0 30.0 41.0 46-47 35.76905603727154 38.0 35.0 40.0 30.0 41.0 48-49 35.684680143786544 37.5 35.0 40.0 29.0 41.0 50-51 35.50835617025372 37.0 35.0 40.0 29.0 41.0 52-53 35.340959143631295 37.0 34.5 40.0 29.0 41.0 54-55 35.1206116056281 36.0 34.0 40.0 28.0 41.0 56-57 34.80402163963585 36.0 34.0 40.0 27.5 41.0 58-59 34.54052584511827 36.0 34.0 39.0 26.5 41.0 60-61 34.238373542938916 35.0 34.0 39.0 26.0 41.0 62-63 33.859157610929124 35.0 33.5 39.0 26.0 40.0 64-65 33.56929404235619 35.0 33.0 38.0 25.0 40.0 66-67 33.3398010817008 35.0 33.0 37.5 25.0 40.0 68-69 32.99731050039375 35.0 33.0 37.0 24.5 39.5 70-71 32.794085910843634 35.0 33.0 36.0 24.0 39.0 72-73 32.56791504595367 35.0 33.0 36.0 24.0 39.0 74-75 32.26419091267363 35.0 32.5 35.5 23.5 38.0 76-77 30.176480629772133 33.0 29.5 34.5 19.5 36.0 78-79 31.30080175679786 34.0 31.0 35.0 20.5 36.5 80-81 31.627542766099587 34.5 32.0 35.0 22.0 36.0 82-83 31.519163694530167 35.0 32.0 35.0 20.0 36.0 84-85 31.358373627238237 34.0 32.0 35.0 20.0 36.0 86 30.946880187481693 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 10.0 10 14.0 11 17.0 12 35.0 13 86.0 14 238.0 15 656.0 16 1500.0 17 3080.0 18 6030.0 19 8786.0 20 11153.0 21 11697.0 22 10760.0 23 10332.0 24 11055.0 25 12541.0 26 14664.0 27 17759.0 28 21633.0 29 26561.0 30 32558.0 31 40173.0 32 50688.0 33 69095.0 34 180217.0 35 155824.0 36 120707.0 37 202865.0 38 274656.0 39 127583.0 40 522.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.93483030195314 23.78399984826122 30.618778095383277 14.662391754402357 2 29.95681767250978 25.874342026232544 31.469779746947484 12.69906055431019 3 28.425450246189143 24.57908294982996 33.68973213188067 13.305734672100225 4 27.38063040437682 26.8469454492065 31.499495257811912 14.272928888604769 5 23.60015707773592 32.52583949830664 30.141924932859105 13.732078491098342 6 24.030364615640757 39.404453392661324 26.13082271220422 10.434359279493698 7 89.11913531375856 3.3578527276801737 6.09575419441812 1.427257764143143 8 90.17168259338433 2.508115565939983 5.651145522406408 1.6690563182692786 9 85.66616485153837 5.391714360178686 6.683109717674547 2.2590110706084094 10-11 42.62198287459282 27.29907081072765 19.060884482532124 11.018061832147406 12-13 31.686148005723926 24.673217192284643 27.183264617677988 16.45737018431344 14-15 15.324598050297189 32.27244978746033 35.39949799753986 17.003454164702607 16-17 21.51030664580727 25.224640129708558 33.09696740215483 20.168085822329346 18-19 24.586705013491404 27.01951318546764 30.219972054774892 18.173809746266066 20-21 27.3397101086829 26.582280704096036 29.1843197641867 16.89368942303437 22-23 21.61174682946739 23.595028869005176 31.889063497761498 22.904160803765933 24-25 19.18505035830724 26.62608122661133 35.97213626423341 18.216732150848017 26-27 17.645885244738494 34.06489923772338 29.9349349736108 18.354280543927324 28-29 16.465624492886892 27.496893218751822 37.185344000944156 18.852138287417134 30-31 22.70121018701102 28.07307908189609 30.75594011657191 18.469770614520982 32-33 26.964824000578858 27.462787118220668 27.598087529390607 17.97430135180987 34-35 20.22175639041545 27.418284101358694 30.37360756839309 21.986351939832762 36-37 24.047119105808996 27.4487021065698 30.382142874705213 18.12203591291599 38-39 20.060990559178475 30.48930838729075 28.30676382631811 21.142937227212663 40-41 21.464925511011952 26.350984440452713 28.92713658386834 23.256953464666992 42-43 21.68937245477517 24.594221703000844 28.91407018902015 24.80233565320383 44-45 19.78585864830253 30.264053575028854 29.150600035546216 20.7994877411224 46-47 21.396748434666975 29.932967989440108 27.616492881273537 21.053790694619384 48-49 21.168191898975692 26.239006841592445 32.40602908748092 20.186772171950945 50-51 19.60675771461729 30.813685151868743 29.15467450275694 20.42488263075703 52-53 23.306303692521034 25.363101765438543 30.196403369443885 21.134191172596537 54-55 23.6199674183122 26.26095978992609 30.173150806568884 19.945921985192825 56-57 23.04996350541869 24.183227385477615 29.548738706525256 23.218070402578437 58-59 24.509571134226295 25.907394385243688 28.52762804891328 21.055406431616742 60-61 25.289901854514824 28.13820030783302 27.125905954271833 19.445991883380316 62-63 23.89088436310809 25.049894660972715 30.524643852928595 20.5345771229906 64-65 20.456916372965487 29.004586585589454 30.780141046814926 19.758355994630133 66-67 19.33826437531744 27.352390131640412 27.348069791408353 25.96127570163379 68-69 18.988211442368417 29.97620651647806 26.098156725083754 24.93742531606977 70-71 19.66250064102609 28.89471646976921 29.80514914306227 21.63763374614243 72-73 23.786247830170588 28.91705578999353 27.10858946862625 20.188106911209633 74-75 23.01097506917813 30.748669300083808 24.502967687367537 21.737387943370525 76-77 26.820039915728778 26.766088349904006 26.679154674502758 19.734717059864458 78-79 20.04859153395963 28.286250991395146 30.894752999475237 20.770404475169986 80-81 17.662358737168063 27.6069038334414 31.534022854951075 23.19671457443946 82-83 19.74177712804856 26.59042963851748 31.283583620360815 22.38420961307314 84-85 17.490914991861604 26.166825547471404 30.135356610717672 26.206902849949316 86 18.930255658767585 26.137988154540327 31.45790759248865 23.47384859420344 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 716.0 1 927.5 2 3265.0 3 3480.0 4 1620.5 5 1823.5 6 2187.0 7 2399.0 8 2453.0 9 2574.0 10 2677.0 11 2706.0 12 2741.5 13 2867.5 14 2951.0 15 2898.5 16 2884.0 17 2960.5 18 3385.5 19 3689.0 20 3858.5 21 4111.0 22 4319.5 23 4814.5 24 5981.5 25 7871.5 26 9820.5 27 11481.5 28 14592.0 29 16981.0 30 18315.5 31 21559.5 32 23315.0 33 24865.5 34 27313.5 35 31150.0 36 34243.0 37 37278.0 38 39863.5 39 42081.0 40 49703.5 41 58606.0 42 67598.0 43 72643.0 44 73905.0 45 74480.5 46 75955.5 47 83586.5 48 89304.5 49 80761.0 50 71969.0 51 62821.0 52 47675.0 53 41627.0 54 39384.0 55 37090.5 56 36201.5 57 35413.0 58 32084.0 59 24367.5 60 17357.5 61 14428.5 62 11546.5 63 7843.5 64 6716.0 65 6006.0 66 4322.5 67 3212.0 68 2899.5 69 2359.5 70 1670.5 71 1346.0 72 1090.5 73 646.0 74 362.0 75 206.5 76 131.5 77 88.0 78 50.5 79 42.0 80 34.5 81 29.5 82 22.5 83 17.0 84 14.0 85 9.0 86 11.0 87 10.5 88 7.0 89 3.0 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1423499.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.60666590600946 #Duplication Level Percentage of deduplicated Percentage of total 1 81.09297821324694 13.466839965106958 2 7.5640174709190395 2.5122622209354217 3 2.2816672125601145 1.1367265532304507 4 1.0833600629875249 0.7196399448778875 5 0.6410934868265395 0.5323212675123509 6 0.4756017366091788 0.47388954865119254 7 0.3186551150362416 0.3704259324253513 8 0.28672544082436335 0.380924288201879 9 0.22756395866538057 0.34011707704244293 >10 2.8398834323914026 11.558406047861144 >50 1.3626525542851131 16.522785856873284 >100 1.8185712615214438 50.51300308331088 >500 0.005954162222006599 0.6410876508662778 >1k 8.505946031437998E-4 0.23766221716040817 >5k 4.252973015718999E-4 0.5939083459440928 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8409 0.590727496120475 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2100 0.14752381280211646 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029645261429758644 0.0 2 0.0 0.0 0.0 0.09863020627341501 0.0 3 0.0 0.0 0.0 0.14443283767673878 0.0 4 0.0 0.0 0.0 0.22205846298451914 0.0 5 0.0 0.0 0.0 0.38988436240559354 0.0 6 0.0 0.0 0.0 0.5057256801725888 0.0 7 0.0 0.0 0.0 0.5942399678538587 0.0 8 0.0 0.0 0.0 0.766421332224329 0.0 9 0.0 0.0 0.0 0.8222696327851302 0.0 10 0.0 0.0 0.0 0.9438714041948747 0.0 11 0.0 0.0 0.0 1.1789962620275813 0.0 12 0.0 0.0 0.0 1.3658597582435956 0.0 13 0.0 0.0 0.0 1.427468512447146 0.0 14 0.0 0.0 0.0 1.4516343179728262 0.0 15 0.0 0.0 0.0 1.4925194889494127 0.0 16 0.0 0.0 0.0 1.5792775407639907 0.0 17 0.0 0.0 0.0 1.697507339309687 0.0 18 0.0 0.0 0.0 1.8338614919996432 0.0 19 0.0 0.0 0.0 1.9304544646676955 0.0 20 0.0 0.0 0.0 2.041518820877289 0.0 21 0.0 0.0 0.0 2.1685297987564445 0.0 22 0.0 0.0 0.0 2.3097311624384704 0.0 23 0.0 0.0 0.0 2.4493167891231393 0.0 24 0.0 0.0 0.0 2.5563066781220076 0.0 25 0.0 0.0 0.0 2.6472094465819787 0.0 26 0.0 0.0 0.0 2.732632759137871 0.0 27 0.0 0.0 0.0 2.834915936014005 0.0 28 0.0 0.0 0.0 2.933054396244746 0.0 29 0.0 0.0 0.0 3.058238888822542 0.0 30 0.0 0.0 0.0 3.2179158538221664 0.0 31 0.0 0.0 0.0 3.3410631127946 0.0 32 0.0 0.0 0.0 3.445453772710764 0.0 33 0.0 0.0 0.0 3.5526544100136355 0.0 34 0.0 0.0 0.0 3.680719129412806 0.0 35 0.0 0.0 0.0 3.8281024433455872 0.0 36 0.0 0.0 0.0 3.954832423486072 0.0 37 0.0 0.0 0.0 4.085496371967946 0.0 38 0.0 0.0 0.0 4.233863177986075 0.0 39 0.0 0.0 0.0 4.519567628779507 0.0 40 0.0 0.0 0.0 4.668988176317651 0.0 41 0.0 0.0 0.0 4.811454029823695 0.0 42 0.0 0.0 0.0 4.965511040049905 0.0 43 0.0 0.0 0.0 5.117882063844092 0.0 44 0.0 0.0 0.0 5.268286103467583 0.0 45 0.0 0.0 0.0 5.407239485240242 0.0 46 0.0 0.0 0.0 5.554341801434353 0.0 47 0.0 0.0 0.0 5.7211842087700795 0.0 48 0.0 0.0 0.0 5.883460402852408 0.0 49 0.0 0.0 0.0 6.048125077713437 0.0 50 0.0 0.0 0.0 6.223467666643953 0.0 51 0.0 0.0 0.0 6.398669756705133 0.0 52 0.0 0.0 0.0 6.622484455556344 0.0 53 0.0 0.0 0.0 6.801901511697585 0.0 54 0.0 0.0 0.0 6.986095529396227 0.0 55 0.0 0.0 0.0 7.170289547094869 0.0 56 0.0 0.0 0.0 7.368182204553709 0.0 57 0.0 0.0 0.0 7.5490744988229705 0.0 58 0.0 0.0 0.0 7.720764117150767 0.0 59 0.0 0.0 0.0 7.902639903505377 0.0 60 0.0 0.0 0.0 8.14176897911414 0.0 61 0.0 0.0 0.0 8.373802861821469 0.0 62 0.0 0.0 0.0 8.626349579451759 0.0 63 0.0 0.0 0.0 8.889012215674194 0.0 64 0.0 0.0 0.0 9.123434579160223 0.0 65 0.0 0.0 0.0 9.342542565888701 0.0 66 7.024943466767452E-5 0.0 0.0 9.553361119326393 0.0 67 1.4049886933534904E-4 0.0 0.0 9.765022665980096 0.0 68 1.4049886933534904E-4 0.0 0.0 10.02677205955185 0.0 69 1.4049886933534904E-4 0.0 0.0 10.44876041360057 0.0 70 2.1074830400302354E-4 0.0 0.0 10.6738396022758 0.0 71 2.809977386706981E-4 0.0 0.0 10.904187498551105 0.0 72 2.809977386706981E-4 0.0 0.0 11.139523104687814 0.0 73 3.512471733383726E-4 0.0 0.0 11.365796533752395 0.0 74 3.512471733383726E-4 0.0 0.0 11.61454978191063 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 45 1.8189894E-12 80.0 1 GCGTAAG 150 0.0 74.666664 1 ACGGGAT 745 0.0 74.09396 5 ACGGGTA 65 0.0 73.84615 5 ATATACG 40 3.7143764E-9 70.0 1 CGTTTTT 4170 0.0 68.48921 1 TATAGCG 100 0.0 68.0 1 ATAGGGA 2530 0.0 66.71937 4 CGTAGCA 30 3.796049E-6 66.66667 80 CGTAAGG 240 0.0 66.66667 2 TAGGGAC 1670 0.0 66.34731 5 CCGGGAT 280 0.0 65.71428 5 CGTAGGG 670 0.0 65.671646 3 TACGGGA 740 0.0 65.4054 4 TAGGGAT 3015 0.0 64.47761 5 CGGGATC 695 0.0 64.460434 6 CGGGATT 960 0.0 64.16667 6 TAGGGAG 1930 0.0 64.04145 5 GTAGGGA 2755 0.0 63.448273 4 GCGGGAT 1420 0.0 63.09859 5 >>END_MODULE