##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547750_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1796854 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.83943993223712 31.0 31.0 33.0 30.0 34.0 2 32.30490011987619 33.0 31.0 34.0 31.0 34.0 3 32.458652177639365 34.0 31.0 34.0 31.0 34.0 4 36.02529921740999 37.0 35.0 37.0 35.0 37.0 5 35.98983278552403 37.0 35.0 37.0 35.0 37.0 6 36.042955075927146 37.0 35.0 37.0 35.0 37.0 7 36.28385277824464 37.0 35.0 37.0 35.0 37.0 8 36.24845312974788 37.0 37.0 37.0 35.0 37.0 9 38.150010518383795 39.0 39.0 39.0 37.0 39.0 10-11 37.59349201437624 39.0 37.5 39.0 35.0 39.0 12-13 36.77980709618032 39.0 35.0 39.0 33.0 39.0 14-15 37.85415064329099 40.0 35.0 41.0 33.0 41.0 16-17 38.03373228987998 40.0 35.0 41.0 34.0 41.0 18-19 37.92802141965903 40.0 36.0 41.0 34.0 41.0 20-21 37.74874975930153 40.0 35.0 41.0 33.5 41.0 22-23 37.563772571394225 39.0 35.0 41.0 33.0 41.0 24-25 37.504860161148315 39.0 35.0 41.0 33.0 41.0 26-27 37.48294547024967 39.0 35.0 41.0 33.0 41.0 28-29 37.48564991924775 39.0 35.0 41.0 33.0 41.0 30-31 37.332993943859655 39.0 35.0 41.0 33.0 41.0 32-33 37.04104785363752 39.0 35.0 41.0 32.5 41.0 34-35 36.782231611472056 39.0 35.0 41.0 31.5 41.0 36-37 36.57959522587812 39.0 35.0 41.0 31.0 41.0 38-39 36.50349972785769 39.0 35.0 41.0 31.0 41.0 40-41 36.371582499190254 39.0 35.0 41.0 30.5 41.0 42-43 36.338665523186634 39.0 35.0 41.0 31.0 41.0 44-45 36.224191002719195 38.0 35.0 41.0 30.0 41.0 46-47 36.159065232901504 38.0 35.0 41.0 30.0 41.0 48-49 36.06001099699809 38.0 35.0 40.5 30.0 41.0 50-51 35.8848273148514 38.0 35.0 40.0 30.0 41.0 52-53 35.71561796339603 37.5 35.0 40.0 29.0 41.0 54-55 35.543756754861555 37.0 35.0 40.0 29.0 41.0 56-57 35.26074878649017 37.0 34.5 40.0 28.5 41.0 58-59 34.97437437877535 36.0 34.0 40.0 28.0 41.0 60-61 34.69590907218951 36.0 34.0 39.5 27.5 41.0 62-63 34.336825084286204 35.5 33.5 39.0 26.5 41.0 64-65 34.0761286114509 35.0 34.0 39.0 26.0 40.0 66-67 33.814281516472676 35.0 34.0 38.0 26.0 40.0 68-69 33.455687273423436 35.0 33.5 37.5 25.5 40.0 70-71 33.220618926189886 35.0 33.0 37.0 25.0 39.0 72-73 32.95286317085306 35.0 33.0 36.5 25.0 39.0 74-75 32.675562677880336 35.0 33.0 36.0 25.0 38.5 76-77 30.61436905836534 33.0 30.0 34.5 21.0 36.0 78-79 31.717141459461928 34.5 31.5 35.0 23.0 37.0 80-81 31.97914966936657 35.0 32.5 35.0 24.0 37.0 82-83 31.859652481503783 35.0 32.5 35.0 23.5 36.0 84-85 31.679121119467695 35.0 32.0 35.0 23.0 36.0 86 31.236778280260946 34.0 31.0 35.0 20.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 13.0 11 9.0 12 26.0 13 70.0 14 188.0 15 643.0 16 1541.0 17 3399.0 18 7113.0 19 11333.0 20 13470.0 21 14088.0 22 12483.0 23 11298.0 24 11590.0 25 13001.0 26 15267.0 27 18604.0 28 23165.0 29 28819.0 30 36555.0 31 45603.0 32 59310.0 33 81729.0 34 205148.0 35 187033.0 36 151585.0 37 269468.0 38 378447.0 39 195076.0 40 769.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.650681691445158 23.233273265384945 31.97789024595209 14.138154797217803 2 29.698628825714273 25.90143662200713 31.097239953830417 13.302694598448175 3 28.934849464675484 24.81731960415259 32.42417024421572 13.823660686956202 4 26.17335632165997 27.19725698359466 32.038329213169234 14.591057481576133 5 24.41250096001122 32.10817350769734 29.393039167344703 14.086286364946735 6 22.840086061527536 40.532452831448744 26.372092557325193 10.25536854969853 7 89.87836518715488 3.098804911250441 5.60891424678911 1.4139156548055658 8 91.008618396375 2.5236329718496884 5.237375991594197 1.2303726401811166 9 87.02203963148925 5.0201630182530135 6.316094685489195 1.6417026647685344 10-11 40.2095829711262 28.817505484585837 19.745928161108246 11.226983383179713 12-13 29.750608563633996 25.81670519697204 27.803594504617514 16.62909173477645 14-15 15.921271288596625 32.78135007073474 34.80285543511047 16.49452320555816 16-17 21.37847593627529 25.91365241694651 33.00947099764366 19.69840064913454 18-19 23.360523448204475 27.997015895559684 30.964007092395935 17.67845356383991 20-21 25.998829064576196 27.882398903861972 30.1499732309915 15.96879880057033 22-23 21.2662241896114 23.97974459805861 32.42361371597247 22.330417496357523 24-25 18.92549422490642 27.13261622814096 35.21952813083311 18.722361416119508 26-27 17.91300239195839 33.916862471853584 29.608832993665597 18.561302142522432 28-29 16.460686288368446 28.650908754968405 36.33122112314078 18.557183833522366 30-31 21.925710157864803 27.994901088235324 31.821644941659144 18.25774381224073 32-33 24.58661082091255 28.30744734964555 29.442458875345466 17.663482954096438 34-35 19.652487069066268 28.52518902481782 30.5288854854095 21.293438420706412 36-37 22.380143294892072 28.522851606196163 30.973328940470402 18.123676158441366 38-39 19.603679542133083 30.326503989750975 28.979009980777516 21.090806487338426 40-41 21.062813116702863 26.45587788434675 29.62188358096985 22.859425417980535 42-43 21.393975247849852 26.460664027238717 29.224633720936705 22.920727003974726 44-45 19.091172682922487 31.439504823430287 29.245058307464046 20.224264186183184 46-47 21.26797725357764 30.072281888233547 28.50287224226342 20.15686861592539 48-49 21.568307720048484 27.311901801704536 31.178520903757345 19.941269574489638 50-51 19.505647092084278 31.19338020785217 28.937019924824163 20.36395277523939 52-53 21.590179280008282 27.21103105761514 30.80495132047456 20.39383834190201 54-55 22.004709341994396 27.54255493212025 31.03816448080924 19.414571245076118 56-57 22.864016775987363 25.284330279477352 30.31581864748054 21.53583429705474 58-59 23.095504698767957 27.166675756627974 29.034022797622956 20.703796746981112 60-61 23.682753301047274 29.06735883939374 27.910197489612397 19.339690369946585 62-63 22.644494210436687 26.71641658142509 30.88781837589476 19.751270832243463 64-65 20.065876248153717 30.19800161838413 30.971687182152806 18.764434951309344 66-67 18.542018438893756 29.35077084726973 27.03310897824754 25.07410173558898 68-69 18.655744985402265 31.2873778281374 26.0186136436238 24.038263542836535 70-71 19.0951796862739 29.903319913582294 29.333796735850548 21.66770366429326 72-73 22.15797722018595 29.689028713518184 27.860972566496777 20.29202149979909 74-75 21.501051281851502 31.468889514673982 25.77137597155918 21.258683231915338 76-77 25.388623672262746 28.093573545763874 26.90652662931991 19.61127615265347 78-79 19.266228641837344 28.996373661966974 30.51074266467949 21.226655031516195 80-81 16.97516882284259 28.64164255971826 31.350376825273507 23.032811792165642 82-83 18.859935197851353 27.305557379731464 31.89176750030887 21.942739922108306 84-85 17.656275913346324 26.928676453401334 30.687802125270053 24.727245507982285 86 18.42331096460814 27.041707339605775 31.089726822546517 23.445254873239563 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 786.0 1 946.0 2 3722.0 3 4031.0 4 1851.0 5 2255.0 6 2898.5 7 3265.0 8 3379.5 9 3511.0 10 3569.5 11 3552.0 12 3492.5 13 3562.5 14 3633.0 15 3647.5 16 3717.5 17 3929.5 18 4142.5 19 4643.5 20 5205.5 21 5323.0 22 5630.0 23 6498.5 24 8329.5 25 11214.0 26 13753.0 27 16706.0 28 20438.5 29 22142.0 30 23333.0 31 28117.0 32 34317.0 33 39072.0 34 45322.5 35 50290.5 36 51156.0 37 53427.5 38 58916.0 39 64121.0 40 71956.5 41 81744.5 42 91233.5 43 96782.0 44 96656.0 45 97172.5 46 100772.0 47 103972.0 48 102218.0 49 88124.0 50 76027.0 51 69686.0 52 56869.5 53 49638.0 54 45342.0 55 40722.5 56 37799.5 57 35956.0 58 31380.5 59 23098.0 60 17118.5 61 13431.0 62 11065.5 63 8058.5 64 6002.0 65 5144.5 66 3723.0 67 2796.5 68 1920.5 69 1155.5 70 713.0 71 522.0 72 467.0 73 398.0 74 272.0 75 105.0 76 45.5 77 34.0 78 19.0 79 11.0 80 14.5 81 17.5 82 12.5 83 8.0 84 4.5 85 0.5 86 0.0 87 1.5 88 2.5 89 1.5 90 0.5 91 0.5 92 0.5 93 0.0 94 1.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1796854.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.773093188403756 #Duplication Level Percentage of deduplicated Percentage of total 1 80.439474770566 12.6877933158239 2 7.78230932403247 2.4550218037789517 3 2.3974997705877614 1.1344796190197217 4 1.151989903802052 0.7268177641908017 5 0.6911572016565815 0.5450843474782813 6 0.4767385276555145 0.45117847339276984 7 0.38249363186173335 0.42231753895282836 8 0.28964554351666516 0.3654884919595372 9 0.2202342636327601 0.3126398007203105 >10 2.9244055275577265 11.391019268688119 >50 1.3043753592032339 15.069176182451322 >100 1.93398797599823 53.24889693606667 >500 0.004621662442642826 0.4646400785304995 >1k 7.110249911758194E-4 0.17332880554402294 >5k 3.555124955879097E-4 0.5521175734022807 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9846 0.5479577083057389 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1971 0.10969171674493308 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022038518432771943 0.0 2 0.0 0.0 0.0 0.07067908689298073 0.0 3 0.0 0.0 0.0 0.1054064492718941 0.0 4 0.0 0.0 0.0 0.17536204944864747 0.0 5 0.0 0.0 0.0 0.3313012632078065 0.0 6 0.0 0.0 0.0 0.4532366013042796 0.0 7 0.0 0.0 0.0 0.5408341467921155 0.0 8 0.0 0.0 0.0 0.7294972212544815 0.0 9 0.0 0.0 0.0 0.788489215039174 0.0 10 0.0 0.0 0.0 0.8974017922435545 0.0 11 0.0 0.0 0.0 1.1048198685035067 0.0 12 0.0 0.0 0.0 1.2672148098843867 0.0 13 0.0 0.0 0.0 1.3181927969662532 0.0 14 0.0 0.0 0.0 1.3367251874665387 0.0 15 0.0 0.0 0.0 1.3666107541291612 0.0 16 0.0 0.0 0.0 1.4396829124681247 0.0 17 0.0 0.0 0.0 1.5459798069292219 0.0 18 0.0 0.0 0.0 1.6567289273363335 0.0 19 0.0 0.0 0.0 1.740597733594382 0.0 20 0.0 0.0 0.0 1.8327031578525579 0.0 21 0.0 0.0 0.0 1.944843598867799 0.0 22 0.0 0.0 0.0 2.0744033738968217 0.0 23 0.0 0.0 0.0 2.206244914723177 0.0 24 0.0 0.0 0.0 2.300799063251661 0.0 25 0.0 0.0 0.0 2.3876731220232696 0.0 26 0.0 0.0 0.0 2.4700949548488635 0.0 27 0.0 0.0 0.0 2.5649830203232984 0.0 28 0.0 0.0 0.0 2.658591070838254 0.0 29 0.0 0.0 0.0 2.7719002211643238 0.0 30 0.0 0.0 0.0 2.9044095958825813 0.0 31 0.0 0.0 0.0 3.022783153222243 0.0 32 0.0 0.0 0.0 3.135257511183435 0.0 33 0.0 0.0 0.0 3.2416100584688574 0.0 34 0.0 0.0 0.0 3.3602618799301447 0.0 35 0.0 0.0 0.0 3.506907072026998 0.0 36 0.0 0.0 0.0 3.629732855312674 0.0 37 0.0 0.0 0.0 3.778158937787934 0.0 38 0.0 0.0 0.0 3.927976340871323 0.0 39 0.0 0.0 0.0 4.13533876430695 0.0 40 0.0 0.0 0.0 4.283430929836258 0.0 41 0.0 0.0 0.0 4.4362535854332075 0.0 42 0.0 0.0 0.0 4.594752829111324 0.0 43 5.565282432518168E-5 0.0 0.0 4.745571983032567 0.0 44 5.565282432518168E-5 0.0 0.0 4.89661374825111 0.0 45 5.565282432518168E-5 0.0 0.0 5.050048584915636 0.0 46 5.565282432518168E-5 0.0 0.0 5.2192888236885135 0.0 47 5.565282432518168E-5 0.0 0.0 5.395485665502038 0.0 48 5.565282432518168E-5 0.0 0.0 5.559995414207275 0.0 49 5.565282432518168E-5 0.0 0.0 5.737694882277581 0.0 50 5.565282432518168E-5 0.0 0.0 5.920403104537153 0.0 51 5.565282432518168E-5 0.0 0.0 6.1100679298373715 0.0 52 5.565282432518168E-5 0.0 0.0 6.321047786854135 0.0 53 5.565282432518168E-5 0.0 0.0 6.5068169144515915 0.0 54 5.565282432518168E-5 0.0 0.0 6.700433090278898 0.0 55 5.565282432518168E-5 0.0 0.0 6.896664948849489 0.0 56 5.565282432518168E-5 0.0 0.0 7.098629048325574 0.0 57 5.565282432518168E-5 0.0 0.0 7.295417435139416 0.0 58 1.1130564865036335E-4 0.0 0.0 7.496157172480347 0.0 59 1.1130564865036335E-4 0.0 0.0 7.699902162334836 0.0 60 1.1130564865036335E-4 0.0 0.0 7.909435045919145 0.0 61 1.1130564865036335E-4 0.0 0.0 8.125813226895453 0.0 62 1.1130564865036335E-4 0.0 0.0 8.373301336669535 0.0 63 1.1130564865036335E-4 0.0 0.0 8.635593097714116 0.0 64 1.1130564865036335E-4 0.0 0.0 8.884082958326053 0.0 65 1.6695847297554502E-4 0.0 0.0 9.107584700815982 0.0 66 1.6695847297554502E-4 0.0 0.0 9.319955878440876 0.0 67 1.6695847297554502E-4 0.0 0.0 9.546017650849763 0.0 68 1.6695847297554502E-4 0.0 0.0 9.809700732502474 0.0 69 1.6695847297554502E-4 0.0 0.0 10.144619429291417 0.0 70 2.226112973007267E-4 0.0 0.0 10.385540505795129 0.0 71 2.226112973007267E-4 0.0 0.0 10.633473838163813 0.0 72 3.3391694595109005E-4 0.0 0.0 10.871000092383689 0.0 73 3.3391694595109005E-4 0.0 0.0 11.12266216398216 0.0 74 3.8956977027627173E-4 0.0 0.0 11.399423659351289 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGG 75 0.0 74.666664 2 CGTTTTT 5670 0.0 71.53439 1 CGAGGGA 1275 0.0 69.333336 4 GGCGCGA 135 0.0 68.14815 8 AGGGATT 4420 0.0 67.9638 6 CGTTAGG 220 0.0 67.27273 2 ACGGGAC 760 0.0 66.31579 5 ACGGGAT 1115 0.0 66.008965 5 GCGCGAC 140 0.0 65.71429 9 CGGGACC 570 0.0 65.26316 6 CTACGGG 380 0.0 65.26315 3 CGTAAGG 295 0.0 65.08475 2 GTTAGCG 80 0.0 65.0 1 AGTACGG 305 0.0 64.26229 2 TAGGGAC 2080 0.0 64.23077 5 ATAGCGG 425 0.0 63.058823 2 TGTAGGG 2715 0.0 63.05709 3 GTAGGGA 2715 0.0 62.6151 4 CGGGATT 1165 0.0 62.489265 6 TAAGGGA 2330 0.0 62.317593 4 >>END_MODULE