##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547746_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2442113 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.848667936332184 31.0 31.0 33.0 30.0 34.0 2 32.281114346469636 33.0 31.0 34.0 31.0 34.0 3 32.40472820053781 34.0 31.0 34.0 31.0 34.0 4 35.99877810731936 37.0 35.0 37.0 35.0 37.0 5 35.958441317007036 37.0 35.0 37.0 35.0 37.0 6 36.02465569775027 37.0 35.0 37.0 35.0 37.0 7 36.261252448187285 37.0 35.0 37.0 35.0 37.0 8 36.20444917987005 37.0 36.0 37.0 35.0 37.0 9 38.053911100755776 39.0 39.0 39.0 35.0 39.0 10-11 37.6013839244949 39.0 37.5 39.0 35.0 39.0 12-13 36.77116558488489 39.0 35.0 39.0 33.0 39.0 14-15 37.81183159829214 40.0 35.0 41.0 33.0 41.0 16-17 37.9702566998333 40.0 35.0 41.0 33.5 41.0 18-19 37.8320714479633 40.0 36.0 41.0 33.5 41.0 20-21 37.60933666869633 39.5 35.0 41.0 33.5 41.0 22-23 37.437563495219095 39.0 35.0 41.0 33.0 41.0 24-25 37.34644035718249 39.0 35.0 41.0 33.0 41.0 26-27 37.292091725485264 39.0 35.0 41.0 33.0 41.0 28-29 37.27889270480113 39.0 35.0 41.0 33.0 41.0 30-31 37.073012591964414 39.0 35.0 41.0 32.5 41.0 32-33 36.72670674944198 39.0 35.0 41.0 31.5 41.0 34-35 36.39808763967925 39.0 35.0 41.0 31.0 41.0 36-37 36.223761554031285 39.0 35.0 41.0 30.0 41.0 38-39 36.12075833509752 38.0 35.0 41.0 30.0 41.0 40-41 35.96687294977751 38.0 35.0 41.0 30.0 41.0 42-43 35.90161347980212 38.0 35.0 41.0 30.0 41.0 44-45 35.785911012307785 38.0 35.0 41.0 29.5 41.0 46-47 35.707623480158375 38.0 35.0 40.5 29.0 41.0 48-49 35.62776742927129 38.0 35.0 40.0 29.0 41.0 50-51 35.460281117212844 37.0 35.0 40.0 29.0 41.0 52-53 35.27771913093292 37.0 35.0 40.0 28.0 41.0 54-55 35.09090672708429 36.5 34.0 40.0 28.0 41.0 56-57 34.797423378852656 36.0 34.0 40.0 26.5 41.0 58-59 34.475413914098155 36.0 34.0 39.5 26.0 41.0 60-61 34.17166629881582 35.0 34.0 39.0 26.0 41.0 62-63 33.77717329214496 35.0 33.5 39.0 25.0 40.5 64-65 33.48871714781421 35.0 33.0 38.5 25.0 40.0 66-67 33.239612786140526 35.0 33.0 37.5 23.5 40.0 68-69 32.83357485914861 35.0 33.0 37.0 22.5 39.5 70-71 32.57815383645229 35.0 33.0 36.5 22.0 39.0 72-73 32.32034103254026 35.0 33.0 36.0 21.5 39.0 74-75 32.05304381902066 35.0 32.5 36.0 20.0 38.5 76-77 30.005555230245285 33.0 29.5 34.5 18.0 36.0 78-79 31.092843779137166 34.0 31.0 35.0 19.0 37.0 80-81 31.314548712528865 35.0 32.0 35.0 19.0 36.0 82-83 31.14513476649115 35.0 32.0 35.0 18.5 36.0 84-85 30.954313129654523 34.0 31.0 35.0 18.0 36.0 86 30.54220750636846 34.0 31.0 35.0 17.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 11.0 10 33.0 11 53.0 12 83.0 13 184.0 14 388.0 15 1241.0 16 3087.0 17 7003.0 18 13799.0 19 19773.0 20 22722.0 21 23010.0 22 20146.0 23 18313.0 24 18195.0 25 19838.0 26 23289.0 27 28162.0 28 34788.0 29 43381.0 30 54833.0 31 68127.0 32 85510.0 33 116192.0 34 281640.0 35 261438.0 36 214739.0 37 348207.0 38 481071.0 39 231956.0 40 890.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.63873293332455 23.050571369957083 28.01012893342773 14.300566763290643 2 32.316686410497795 24.689316178244002 29.23136644373131 13.762630967526892 3 29.99877565043059 24.393097289109882 32.236878473682424 13.371248586777106 4 27.19284488473711 26.204561377790466 30.98705915737724 15.615534580095188 5 23.27992193645421 31.04979171725469 29.811601674451595 15.85868467183951 6 21.49609784641415 40.38347119891667 27.27801702869605 10.842413925973123 7 85.0996657402831 4.390050747037504 8.094220046328733 2.416063466350656 8 85.35002270574704 3.8978949786516845 8.230208839640099 2.521873475961186 9 80.78876775972283 6.148282245743748 9.70319555237616 3.359754442157263 10-11 39.97497249308283 25.61775396961566 21.303109233684108 13.104164303617399 12-13 29.560384797918854 25.995029714022245 28.271337157617193 16.173248330441712 14-15 16.750555768713404 31.423975876628152 35.70604636231002 16.11942199234843 16-17 21.767195047895 24.45110033810884 34.1082497001572 19.67345491383896 18-19 24.389923807784488 27.840951667674673 30.082453187055634 17.6866713374852 20-21 25.93070017644556 27.72854900653655 29.701451161350846 16.63929965566704 22-23 21.000625278191468 24.729875316989837 32.5785498050254 21.690949599793292 24-25 21.343156520603266 26.59745883994721 33.27917258537995 18.78021205406957 26-27 18.302429084976822 32.99362068831377 29.706590153690676 18.997360073018736 28-29 16.276110073530585 28.312899525943315 36.73011854897788 18.68087185154823 30-31 23.144956846796198 27.650071884470538 31.33759576235825 17.867375506375012 32-33 25.74860377058719 28.281082816397113 28.318509421963682 17.651803991052013 34-35 19.409585060150782 28.068828100910974 31.486319429117327 21.03526740982092 36-37 22.17151704282316 29.46563078776453 29.97828110329047 18.38457106612184 38-39 20.124662536090675 31.324021451914795 27.90982644947224 20.641489562522292 40-41 21.03897321704606 26.585747670152855 29.643202423475078 22.732076689326007 42-43 20.76625856379291 27.058575913563377 28.5420862998559 23.633079222787806 44-45 19.621102709006504 30.287869562137377 29.481068238857087 20.60995948999903 46-47 20.907222556859573 30.200301951629594 28.092967033057032 20.799508458453804 48-49 20.068010775914136 27.821173713091902 31.426207550592462 20.684607960401504 50-51 18.732507463823335 30.482496100712787 30.073792654148274 20.711203781315607 52-53 21.748666011769316 26.731175011148135 30.30564105755958 21.214517919522972 54-55 20.698980759694578 27.48396572967754 31.26163695127949 20.555416559348398 56-57 22.258757068161874 25.4114776834651 30.00284999097093 22.326915257402096 58-59 23.17022185296094 27.535928927121716 28.683234559580168 20.610614660337177 60-61 23.88394804007841 29.152275099473286 27.73800802829353 19.225768832154777 62-63 23.6767708947129 26.210335066395373 30.194528263024683 19.91836577586705 64-65 20.34739997698714 30.2979223320133 30.28590405112294 19.068773639876614 66-67 18.83397696994365 30.09299733468517 26.94912151894691 24.12390417642427 68-69 18.332341705727785 32.00539860358632 26.528420265565106 23.133839425120787 70-71 19.28903371793197 30.15329347986764 29.549779228070115 21.00789357413027 72-73 22.12338249704252 30.52854229104059 27.44434839829279 19.903726813624104 74-75 20.878354113835027 31.680597908450594 25.75284190371207 21.68820607400231 76-77 24.098434429528854 28.96972826400744 26.707158923440478 20.224678383023225 78-79 19.04829956680956 29.937394379375565 29.41196824225578 21.60233781155909 80-81 17.516081360690517 29.3755448662695 29.11200259775039 23.996371175289596 82-83 19.413106600718315 28.977344619188383 29.855539035253486 21.754009744839816 84-85 17.614623074362243 27.96484028380341 28.890002223484334 25.53053441835001 86 18.260539131481632 28.199309368567306 30.729372473755312 22.810779026195757 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1658.0 1 2435.0 2 8529.5 3 8811.5 4 3958.0 5 4568.5 6 5497.5 7 5998.0 8 6022.5 9 6172.5 10 6287.0 11 6318.5 12 6445.5 13 6589.0 14 6648.0 15 6704.0 16 7161.0 17 7515.0 18 7591.5 19 8278.5 20 10500.0 21 12158.0 22 11486.0 23 12033.5 24 13932.5 25 16015.0 26 19942.5 27 24179.5 28 27515.0 29 29138.0 30 31892.0 31 37530.0 32 43107.5 33 46596.0 34 49648.5 35 54137.5 36 56369.0 37 63216.5 38 67818.0 39 71542.5 40 83593.5 41 100174.5 42 115152.0 43 119629.0 44 125731.5 45 131465.0 46 132817.5 47 134215.0 48 129254.0 49 120890.5 50 117164.0 51 103038.5 52 83846.0 53 71692.0 54 65794.0 55 63187.5 56 58458.5 57 57525.0 58 49984.5 59 37163.0 60 28373.5 61 23717.0 62 19521.0 63 14727.5 64 12982.0 65 11115.5 66 7417.5 67 5112.0 68 4243.5 69 3175.0 70 2233.5 71 1966.0 72 1570.0 73 1159.5 74 946.0 75 513.0 76 272.0 77 219.5 78 180.5 79 187.0 80 143.5 81 70.0 82 42.5 83 33.0 84 16.0 85 12.0 86 13.0 87 9.5 88 8.0 89 8.5 90 6.0 91 2.5 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2442113.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.110132249682273 #Duplication Level Percentage of deduplicated Percentage of total 1 79.05728995176294 11.945661064726156 2 9.7473286037295 2.945668485669272 3 3.0956458244584275 1.4032685341723066 4 1.4795190216095089 0.8942291232976083 5 0.8070582219857313 0.6097378233698918 6 0.5232791341672747 0.47440901524600526 7 0.3900648001268083 0.4125751501103369 8 0.2929857586119487 0.3541642847920025 9 0.23596513467943908 0.32089179521883726 >10 2.083285835413517 6.840249990012705 >50 0.5921247680369597 6.581307999252875 >100 1.6131679830562695 58.16118246601037 >500 0.07654415103415765 6.671347990137083 >1k 0.00546743935958269 1.5844487620083232 >5k 0.0 0.0 >10k+ 2.7337196797913446E-4 0.8008575159762598 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19388 0.7939026572480471 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAAT 4285 0.17546280618464422 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3475 0.14229480781601833 No Hit ATTGAAGGGATATTAAACTGACAGCATTAATGAATTACTTTTTGCTTATT 3323 0.13607068960363422 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAAT 3010 0.12325391986365906 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAAT 2780 0.11383584625281468 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0948146134106E-5 0.0 0.0 0.05605801205759111 0.0 2 4.0948146134106E-5 0.0 0.0 0.16993480645653988 0.0 3 4.0948146134106E-5 0.0 0.0 0.23463287734842736 0.0 4 4.0948146134106E-5 0.0 0.0 0.34863251618577845 0.0 5 4.0948146134106E-5 0.0 0.0 0.6020196444636263 0.0 6 4.0948146134106E-5 0.0 0.0 0.7922237832565487 0.0 7 4.0948146134106E-5 0.0 0.0 0.9170746808194379 0.0 8 4.0948146134106E-5 0.0 0.0 1.1560480616580806 0.0 9 4.0948146134106E-5 0.0 0.0 1.2432266647775922 0.0 10 4.0948146134106E-5 0.0 0.0 1.4118920787039748 0.0 11 4.0948146134106E-5 0.0 0.0 1.7200678265092566 0.0 12 4.0948146134106E-5 0.0 0.0 1.951629592897626 0.0 13 4.0948146134106E-5 0.0 0.0 2.0404051737163678 0.0 14 4.0948146134106E-5 0.0 0.0 2.078855482936293 0.0 15 4.0948146134106E-5 0.0 0.0 2.146051390742361 0.0 16 4.0948146134106E-5 0.0 0.0 2.2793376064088764 0.0 17 4.0948146134106E-5 0.0 0.0 2.432647465534969 0.0 18 4.0948146134106E-5 0.0 0.0 2.6244076338809874 0.0 19 4.0948146134106E-5 0.0 0.0 2.745532250145673 0.0 20 4.0948146134106E-5 0.0 0.0 2.8847968951477676 0.0 21 4.0948146134106E-5 0.0 0.0 3.0486304278303256 0.0 22 4.0948146134106E-5 0.0 0.0 3.2165178269801604 0.0 23 4.0948146134106E-5 0.0 0.0 3.3803513596627184 0.0 24 8.1896292268212E-5 0.0 0.0 3.50851905706247 0.0 25 8.1896292268212E-5 0.0 0.0 3.618669570163215 0.0 26 8.1896292268212E-5 0.0 0.0 3.7366411791755745 0.0 27 8.1896292268212E-5 0.0 0.0 3.870214031865028 0.0 28 8.1896292268212E-5 0.0 0.0 4.01283642485012 0.0 29 8.1896292268212E-5 0.0 0.0 4.171469542973647 0.0 30 1.22844438402318E-4 0.0 0.0 4.345908645504938 0.0 31 1.22844438402318E-4 0.0 0.0 4.511953378078737 0.0 32 1.22844438402318E-4 0.0 0.0 4.652651208195525 0.0 33 1.22844438402318E-4 0.0 0.0 4.804118400745584 0.0 34 1.22844438402318E-4 0.0 0.0 4.980195429122239 0.0 35 1.22844438402318E-4 0.0 0.0 5.166878027347629 0.0 36 1.22844438402318E-4 0.0 0.0 5.329073634184823 0.0 37 1.22844438402318E-4 0.0 0.0 5.508221773521536 0.0 38 1.22844438402318E-4 0.0 0.0 5.7035853787273565 0.0 39 1.22844438402318E-4 0.0 0.0 6.014095170862282 0.0 40 1.22844438402318E-4 0.0 0.0 6.214659190627133 0.0 41 1.22844438402318E-4 0.0 0.0 6.428408513447167 0.0 42 1.22844438402318E-4 0.0 0.0 6.633763466309708 0.0 43 1.22844438402318E-4 0.0 0.0 6.819749946050817 0.0 44 1.22844438402318E-4 0.0 0.0 7.011059684789361 0.0 45 1.22844438402318E-4 0.0 0.0 7.19225523143278 0.0 46 1.22844438402318E-4 0.0 0.0 7.404243783969046 0.0 47 1.22844438402318E-4 0.0 0.0 7.627656869276729 0.0 48 1.22844438402318E-4 0.0 0.0 7.828712266795189 0.0 49 1.22844438402318E-4 0.0 0.0 8.045491752429147 0.0 50 1.22844438402318E-4 0.0 0.0 8.263213045424187 0.0 51 1.22844438402318E-4 0.0 0.0 8.509352351836299 0.0 52 1.22844438402318E-4 0.0 0.0 8.791648871284826 0.0 53 1.22844438402318E-4 0.0 0.0 9.021122282220356 0.0 54 1.22844438402318E-4 0.0 0.0 9.266483573855918 0.0 55 1.22844438402318E-4 0.0 0.0 9.500461280866201 0.0 56 1.22844438402318E-4 0.0 0.0 9.751514364814405 0.0 57 1.22844438402318E-4 0.0 0.0 9.985246382947881 0.0 58 1.22844438402318E-4 0.0 0.0 10.20583404617231 0.0 59 1.22844438402318E-4 0.0 0.0 10.450294478592923 0.0 60 1.22844438402318E-4 0.0 0.0 10.713058732335481 0.0 61 1.22844438402318E-4 0.0 0.0 10.987370363287857 0.0 62 1.63792584536424E-4 0.0 0.0 11.304800392119448 0.0 63 1.63792584536424E-4 0.0 0.0 11.619404998867784 0.0 64 1.63792584536424E-4 0.0 0.0 11.910792006758083 0.0 65 1.63792584536424E-4 0.0 0.0 12.179616586128487 0.0 66 1.63792584536424E-4 0.0 0.0 12.424240811133638 0.0 67 2.8663702293874196E-4 0.0 0.0 12.69732399770199 0.0 68 2.8663702293874196E-4 0.0 0.0 13.006073019553149 0.0 69 2.8663702293874196E-4 0.0 0.0 13.429845383895012 0.0 70 3.27585169072848E-4 0.0 0.0 13.724753932352844 0.0 71 3.27585169072848E-4 0.0 0.0 13.999352200328158 0.0 72 3.27585169072848E-4 0.0 0.0 14.298765044860742 0.0 73 3.6853331520695395E-4 0.0 0.0 14.591011963819856 0.0 74 3.6853331520695395E-4 0.0 0.0 14.93231476184763 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAG 135 0.0 80.0 1 CGTAAGG 410 0.0 78.04878 2 TAGCGGG 800 0.0 72.5 3 CGTTTTT 8420 0.0 71.06888 1 TAGTCGA 40 3.7161954E-9 70.00001 1 AGACCGG 225 0.0 69.333336 2 CGAGGGA 1040 0.0 69.23077 4 CAGTCGA 35 1.1820521E-7 68.57143 7 TAGGGAC 2130 0.0 67.60563 5 ATAGCGG 300 0.0 66.66667 2 GTTAGCG 30 3.796864E-6 66.666664 1 GGACGTA 85 0.0 65.882355 8 CGTTAGG 320 0.0 65.00001 2 CGATTGG 620 0.0 64.51613 2 GGGCGAT 1280 0.0 63.437504 7 CGGGCGA 345 0.0 62.608696 6 TAGGGAT 3005 0.0 62.562397 5 TTAGACG 175 0.0 61.714283 1 TTACGGG 935 0.0 61.604275 3 TAGGGTA 1690 0.0 61.538464 5 >>END_MODULE