##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547745_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2932866 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80471627411549 31.0 31.0 33.0 30.0 34.0 2 32.2657687054233 33.0 31.0 34.0 31.0 34.0 3 32.406574320136 34.0 31.0 34.0 31.0 34.0 4 36.01835883398696 37.0 35.0 37.0 35.0 37.0 5 35.983839698097356 37.0 35.0 37.0 35.0 37.0 6 36.0376900956266 37.0 35.0 37.0 35.0 37.0 7 36.250467290356944 37.0 35.0 37.0 35.0 37.0 8 36.20460123306008 37.0 36.0 37.0 35.0 37.0 9 38.08180053231208 39.0 39.0 39.0 37.0 39.0 10-11 37.5493934942817 39.0 37.0 39.0 35.0 39.0 12-13 36.99251022719756 39.0 35.0 39.0 33.5 39.0 14-15 38.15498099810901 40.0 36.0 41.0 33.0 41.0 16-17 38.26349720716868 40.0 36.0 41.0 34.0 41.0 18-19 38.091340177150954 40.0 36.0 41.0 34.0 41.0 20-21 37.87421893806263 40.0 35.0 41.0 34.0 41.0 22-23 37.677385022022825 39.5 35.0 41.0 33.0 41.0 24-25 37.57483311545771 39.5 35.0 41.0 33.0 41.0 26-27 37.54284904254064 40.0 35.0 41.0 33.0 41.0 28-29 37.50701787943943 40.0 35.0 41.0 33.0 41.0 30-31 37.31467956599449 40.0 35.0 41.0 33.0 41.0 32-33 36.894446592513944 39.5 35.0 41.0 31.5 41.0 34-35 36.521378405968775 39.0 35.0 41.0 30.5 41.0 36-37 36.29759763998764 39.0 35.0 41.0 30.0 41.0 38-39 36.18694324936769 39.0 35.0 41.0 30.0 41.0 40-41 36.02272060844239 39.0 35.0 41.0 29.0 41.0 42-43 35.97490696813288 39.0 35.0 41.0 29.0 41.0 44-45 35.86258884654123 39.0 35.0 41.0 29.0 41.0 46-47 35.77335872146904 38.0 35.0 41.0 29.0 41.0 48-49 35.65410131250456 38.0 35.0 40.5 28.0 41.0 50-51 35.479263116691996 38.0 35.0 40.0 28.0 41.0 52-53 35.28416368153199 38.0 35.0 40.0 27.0 41.0 54-55 35.10869726063175 37.0 34.5 40.0 27.0 41.0 56-57 34.83292059712241 37.0 34.0 40.0 26.0 41.0 58-59 34.5609313552 36.0 34.0 40.0 26.0 41.0 60-61 34.255208898053986 36.0 34.0 39.5 25.5 41.0 62-63 33.91119284004111 35.5 33.5 39.0 25.0 41.0 64-65 33.6381058664119 35.0 33.0 39.0 24.5 40.0 66-67 33.348571158723246 35.0 33.0 38.0 23.5 40.0 68-69 32.927721893874455 35.0 33.0 37.0 22.5 40.0 70-71 32.67032537456536 35.0 33.0 37.0 22.0 39.0 72-73 32.42575317113022 35.0 33.0 36.5 21.5 39.0 74-75 32.120578471706516 35.0 32.5 36.0 20.5 38.5 76-77 30.09328622582825 33.0 29.5 34.5 18.0 36.0 78-79 31.26233401048667 34.0 31.5 35.0 19.0 37.0 80-81 31.44717880053163 35.0 32.0 35.0 19.5 36.5 82-83 31.287284008202217 35.0 32.0 35.0 19.0 36.0 84-85 31.084433281302317 34.0 32.0 35.0 18.5 36.0 86 30.669618386929372 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 13.0 10 12.0 11 32.0 12 48.0 13 173.0 14 552.0 15 1673.0 16 4156.0 17 9692.0 18 20018.0 19 30954.0 20 34071.0 21 30830.0 22 25199.0 23 21458.0 24 20188.0 25 21747.0 26 25425.0 27 30434.0 28 37315.0 29 46177.0 30 57868.0 31 72788.0 32 92660.0 33 125603.0 34 285831.0 35 273097.0 36 268224.0 37 460142.0 38 638430.0 39 297002.0 40 1042.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.730759605109814 23.714550886402584 29.821717050830145 15.73297245765746 2 31.88925099203305 25.126889533991665 30.061448426215176 12.92241104776011 3 28.052969348071137 24.029669272309064 34.16705706977407 13.75030430984573 4 25.80782756525528 26.631936133461267 33.09373834331333 14.466497957970123 5 24.261626681887275 30.388807398633283 31.16286253787251 14.186703381606932 6 22.550263121465488 39.55465404829269 27.59161175450907 10.303471075732748 7 86.8218322964636 3.569648255324314 8.11220151210454 1.496317936107548 8 87.50420237406004 3.0863667143333515 7.922557662027518 1.4868732495790806 9 82.95026093929965 5.225025623400455 9.566580948464743 2.258132488835153 10-11 36.04031005848886 26.837571167588294 23.958101052008512 13.16401772191433 12-13 28.55549827370224 24.286499962834988 29.71990537583374 17.438096387629027 14-15 17.68130558982238 30.13577845015763 34.58645911541816 17.596456844601832 16-17 22.144448467812712 26.140011169961397 32.97590138792567 18.739638974300224 18-19 23.459459109280818 27.712960633046315 30.951686848291054 17.875893409381813 20-21 25.97825812703342 26.845975915708387 30.69819759920842 16.477568358049773 22-23 22.24586803488465 24.193451047541892 32.67629683729158 20.884384080281883 24-25 19.972221710777102 27.75788256265373 33.60383665670372 18.666059069865447 26-27 19.293857953278465 32.00918487240808 30.23419753919886 18.462759635114594 28-29 17.453865945460855 27.989413767966216 35.3839725374429 19.172747749130032 30-31 21.902057577809554 28.043115505447574 31.385920802382376 18.668906114360492 32-33 23.503358148650502 28.11134228430484 29.791644077840584 18.593655489204075 34-35 20.227705595823334 28.833417551296243 30.237180969058937 20.701695883821493 36-37 22.462038838460398 29.20515291186164 29.798429249750924 18.534378999927036 38-39 20.720431823342764 29.677932779745138 29.050679437792247 20.55095595911985 40-41 20.69385372533215 27.677006041189745 29.617445870353436 22.011694363124672 42-43 21.201326620445666 27.728252842100527 28.71863221845117 22.35178831900264 44-45 20.184062279013087 30.382857587083762 28.51045700690042 20.922623127002733 46-47 20.909615372812805 29.514457871583634 28.89080169363346 20.6851250619701 48-49 21.35441919269411 27.737032649974463 30.290132587032616 20.618415570298815 50-51 20.009744734331537 30.162714559751453 29.008689793533016 20.818850912383997 52-53 21.855243301262313 27.254756951050613 30.3131646655524 20.576835082134675 54-55 21.214624193536288 27.673937370476526 30.592413700455456 20.51902473553173 56-57 22.013262794822538 27.38127142528844 29.459665051182014 21.145800728707005 58-59 22.545574874542513 28.20517541544687 28.812499445934453 20.43675026407616 60-61 23.066174861040363 29.3992292863022 27.53450038290191 20.00009546975552 62-63 22.63633933497132 27.028578871315634 30.082707494989542 20.252374298723502 64-65 20.542653500023526 30.145086751321067 29.255018810951473 20.057240937703938 66-67 19.574504938173103 29.60128420459714 27.063425332081316 23.76078552514844 68-69 19.59458768317407 31.025454282602748 26.94611686998315 22.43384116424003 70-71 19.92627689093194 29.54325223177602 29.383800691882954 21.146670185409082 72-73 22.100498283931145 29.730338856258694 27.760149969347392 20.409012890462776 74-75 21.12500196053962 30.87713519813043 26.082320160552854 21.915542680777097 76-77 23.539176355142036 28.540836846961298 27.435365270694263 20.4846215272024 78-79 19.99774282220872 29.65906045485883 29.237237568985424 21.105959153947026 80-81 18.773479592998793 28.866218231586444 29.589878978446336 22.770423196968427 82-83 20.304661038042653 28.284227782653552 29.815341035014896 21.5957701442889 84-85 19.06871981195186 28.137886285974194 28.821176964784616 23.97221693728933 86 19.717402704385403 28.192457480157636 29.74708015981637 22.343059655640594 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1351.0 1 1781.0 2 8401.0 3 9266.5 4 4293.5 5 5152.5 6 6055.5 7 6451.0 8 6818.0 9 7408.5 10 7657.5 11 7684.0 12 7807.5 13 7864.5 14 7799.0 15 8165.5 16 8894.5 17 9425.0 18 10062.5 19 10381.5 20 10428.0 21 10625.0 22 11604.0 23 13859.5 24 15935.5 25 19090.0 26 23406.0 27 26951.0 28 32190.5 29 35846.0 30 39547.5 31 44808.0 32 53216.0 33 59396.0 34 63580.5 35 75721.5 36 83009.0 37 83993.5 38 86178.0 39 94965.0 40 107803.5 41 118591.5 42 132047.0 43 139966.0 44 144262.5 45 152564.5 46 157493.5 47 154850.0 48 151651.5 49 143693.5 50 135367.0 51 121511.5 52 100493.0 53 88892.5 54 81186.0 55 75956.0 56 67393.5 57 60792.0 58 55879.0 59 43842.5 60 33709.5 61 28744.5 62 24358.0 63 19474.0 64 17021.0 65 13864.0 66 9086.5 67 6775.5 68 5330.0 69 3602.5 70 2182.5 71 1735.0 72 1557.0 73 1081.0 74 739.5 75 581.0 76 376.5 77 219.5 78 144.0 79 136.0 80 93.0 81 46.0 82 35.0 83 24.5 84 19.5 85 15.0 86 12.0 87 12.5 88 9.0 89 4.0 90 2.5 91 1.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2932866.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.235030895412123 #Duplication Level Percentage of deduplicated Percentage of total 1 80.55590897964447 13.883835800721792 2 7.227387536796728 2.4912849497961624 3 2.2297181155620476 1.1528778182931596 4 1.1535173455022167 0.7952362835249794 5 0.7545188987436653 0.6502078265509702 6 0.5375347465760819 0.5558656778757779 7 0.4475783948482874 0.5399819224330439 8 0.31877425514701757 0.4395267308896668 9 0.2803433702132956 0.4348553982255097 >10 3.523465976958134 14.682418172759066 >50 1.3898120056503902 17.473022942247002 >100 1.5764396153371534 45.2426592871063 >500 0.0030004554123375486 0.3383750153993547 >1k 0.0018002732474025293 0.4185990256728441 >5k 0.0 0.0 >10k+ 2.0003036082250327E-4 0.901253148504323 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26142 0.8913465531667658 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0228902377401491E-4 0.0 0.0 0.019469010858320836 0.0 2 1.0228902377401491E-4 0.0 0.0 0.057963780138608444 0.0 3 1.0228902377401491E-4 0.0 0.0 0.08892325800087696 0.0 4 1.0228902377401491E-4 0.0 0.0 0.13972680647530436 0.0 5 1.0228902377401491E-4 0.0 0.0 0.2633260435355724 0.0 6 1.0228902377401491E-4 0.0 0.0 0.3958244256641797 0.0 7 1.0228902377401491E-4 0.0 0.0 0.47932636540503387 0.0 8 1.0228902377401491E-4 0.0 0.0 0.6356580900729867 0.0 9 1.0228902377401491E-4 0.0 0.0 0.6961109031234295 0.0 10 1.0228902377401491E-4 0.0 0.0 0.8020482354120508 0.0 11 1.0228902377401491E-4 0.0 0.0 0.9778489709383245 0.0 12 1.0228902377401491E-4 0.0 0.0 1.104891938465651 0.0 13 1.0228902377401491E-4 0.0 0.0 1.1519107930604398 0.0 14 1.0228902377401491E-4 0.0 0.0 1.173800644148079 0.0 15 1.0228902377401491E-4 0.0 0.0 1.2048283146928636 0.0 16 1.0228902377401491E-4 0.0 0.0 1.2729187081850994 0.0 17 1.0228902377401491E-4 0.0 0.0 1.358568717425208 0.0 18 1.0228902377401491E-4 0.0 0.0 1.4514471510120135 0.0 19 1.0228902377401491E-4 0.0 0.0 1.523151756677598 0.0 20 1.0228902377401491E-4 0.0 0.0 1.6010278001108813 0.0 21 1.0228902377401491E-4 0.0 0.0 1.702464415353446 0.0 22 1.0228902377401491E-4 0.0 0.0 1.8157665573537967 0.0 23 1.0228902377401491E-4 0.0 0.0 1.9337058017652358 0.0 24 1.0228902377401491E-4 0.0 0.0 2.0232427939087567 0.0 25 1.0228902377401491E-4 0.0 0.0 2.105210398293001 0.0 26 1.0228902377401491E-4 0.0 0.0 2.1810747575920617 0.0 27 1.0228902377401491E-4 0.0 0.0 2.265599587570656 0.0 28 1.0228902377401491E-4 0.0 0.0 2.353738629722599 0.0 29 1.0228902377401491E-4 0.0 0.0 2.458346204702158 0.0 30 1.0228902377401491E-4 0.0 0.0 2.5703185893934464 0.0 31 1.0228902377401491E-4 0.0 0.0 2.683382057004991 0.0 32 1.0228902377401491E-4 0.0 0.0 2.780147473495209 0.0 33 1.0228902377401491E-4 0.0 0.0 2.8861870948076045 0.0 34 1.0228902377401491E-4 0.0 0.0 2.9979208051100867 0.0 35 1.0228902377401491E-4 0.0 0.0 3.1245546165423175 0.0 36 1.0228902377401491E-4 0.0 0.0 3.241982415834886 0.0 37 1.0228902377401491E-4 0.0 0.0 3.3705256223775653 0.0 38 1.0228902377401491E-4 0.0 0.0 3.5086839971550012 0.0 39 1.0228902377401491E-4 0.0 0.0 3.691474482639166 0.0 40 1.0228902377401491E-4 0.0 0.0 3.840986939055518 0.0 41 1.3638536503201987E-4 0.0 0.0 3.9889309637740014 0.0 42 1.3638536503201987E-4 0.0 0.0 4.141989439681185 0.0 43 1.7048170629002483E-4 0.0 0.0 4.283659737608196 0.0 44 1.7048170629002483E-4 0.0 0.0 4.4312968952553575 0.0 45 1.7048170629002483E-4 0.0 0.0 4.5763086346256525 0.0 46 1.7048170629002483E-4 0.0 0.0 4.737857099506081 0.0 47 1.7048170629002483E-4 0.0 0.0 4.904383630210177 0.0 48 1.7048170629002483E-4 0.0 0.0 5.062658846329835 0.0 49 1.7048170629002483E-4 0.0 0.0 5.225639357543099 0.0 50 1.7048170629002483E-4 0.0 0.0 5.396462027245704 0.0 51 1.7048170629002483E-4 0.0 0.0 5.569466862788822 0.0 52 1.7048170629002483E-4 0.0 0.0 5.760304084809875 0.0 53 2.0457804754802982E-4 0.0 0.0 5.937161806915147 0.0 54 2.0457804754802982E-4 0.0 0.0 6.123771082620208 0.0 55 2.0457804754802982E-4 0.0 0.0 6.304652172993925 0.0 56 2.3867438880603478E-4 0.0 0.0 6.497739753538007 0.0 57 2.3867438880603478E-4 0.0 0.0 6.685951557282194 0.0 58 2.3867438880603478E-4 0.0 0.0 6.87385649395506 0.0 59 2.3867438880603478E-4 0.0 0.0 7.071342502521424 0.0 60 2.3867438880603478E-4 0.0 0.0 7.276738862259647 0.0 61 2.3867438880603478E-4 0.0 0.0 7.488238467083051 0.0 62 2.3867438880603478E-4 0.0 0.0 7.723707799810834 0.0 63 2.3867438880603478E-4 0.0 0.0 7.957199544745651 0.0 64 2.3867438880603478E-4 0.0 0.0 8.18298551655616 0.0 65 2.3867438880603478E-4 0.0 0.0 8.392882593340438 0.0 66 2.3867438880603478E-4 0.0 0.0 8.601484009156913 0.0 67 2.3867438880603478E-4 0.0 0.0 8.81891637735921 0.0 68 2.3867438880603478E-4 0.0 0.0 9.052817278389124 0.0 69 2.3867438880603478E-4 0.0 0.0 9.34413641809752 0.0 70 2.3867438880603478E-4 0.0 0.0 9.578173704492466 0.0 71 2.3867438880603478E-4 0.0 0.0 9.825338082271744 0.0 72 2.3867438880603478E-4 0.0 0.0 10.056886335754855 0.0 73 2.3867438880603478E-4 0.0 0.0 10.303402883050232 0.0 74 2.3867438880603478E-4 0.0 0.0 10.566183385125676 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15160 0.0 73.7467 1 TCGATAG 180 0.0 66.666664 1 CGGGTAG 495 0.0 64.64646 6 CGTTAGG 380 0.0 64.210526 2 GTACGGG 1120 0.0 63.214287 3 TGCGTAG 405 0.0 63.209873 1 CGAGGGA 1785 0.0 62.296917 4 GCGCGAC 235 0.0 61.2766 9 ATAGGGC 1025 0.0 61.26829 4 ATAGCGG 850 0.0 61.17647 2 GGGCGAT 1990 0.0 60.904522 7 CGGGACT 1015 0.0 60.295563 6 CGAGGGT 665 0.0 60.150375 4 GCGACTA 20 0.0040990966 60.0 9 ACGGGTA 500 0.0 60.0 5 TAGCGGG 2155 0.0 59.953598 3 TATAGCG 235 0.0 59.57447 1 AGGGATT 5400 0.0 59.555557 6 TATTGCG 430 0.0 59.53488 1 TAGGGAT 4410 0.0 59.501137 5 >>END_MODULE