##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547744_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1783520 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.837696241141114 31.0 31.0 33.0 30.0 34.0 2 32.284748138512604 33.0 31.0 34.0 31.0 34.0 3 32.46713297299722 34.0 31.0 34.0 31.0 34.0 4 36.0383701892886 37.0 35.0 37.0 35.0 37.0 5 35.99112092939804 37.0 35.0 37.0 35.0 37.0 6 36.04959742531623 37.0 35.0 37.0 35.0 37.0 7 36.23368451152776 37.0 35.0 37.0 35.0 37.0 8 36.18194693639544 37.0 35.0 37.0 35.0 37.0 9 38.1058479860052 39.0 39.0 39.0 37.0 39.0 10-11 37.5860579079573 39.0 37.5 39.0 35.0 39.0 12-13 36.39797367004576 38.0 35.0 39.0 33.0 39.0 14-15 37.29733504530367 39.0 35.0 41.0 33.0 41.0 16-17 37.560523291020004 39.0 35.0 41.0 33.5 41.0 18-19 37.49738606800036 39.0 35.0 41.0 33.5 41.0 20-21 37.26730033865614 39.0 35.0 41.0 33.0 41.0 22-23 37.072340371848924 38.0 35.0 41.0 33.0 41.0 24-25 36.98525359962322 38.0 35.0 41.0 33.0 41.0 26-27 36.96056281959271 38.0 35.0 41.0 33.0 41.0 28-29 36.98793369292186 38.0 35.0 41.0 33.0 41.0 30-31 36.84169563559702 38.0 35.0 41.0 32.5 41.0 32-33 36.50844762043599 38.0 35.0 41.0 32.0 41.0 34-35 36.25512301516103 38.0 35.0 41.0 31.0 41.0 36-37 36.038743608145694 38.0 35.0 41.0 30.5 41.0 38-39 36.00559119045484 38.0 35.0 41.0 31.0 41.0 40-41 35.82821274782452 37.5 35.0 40.0 30.0 41.0 42-43 35.81091156813493 37.0 35.0 40.0 30.0 41.0 44-45 35.70298174396699 37.0 35.0 40.0 30.0 41.0 46-47 35.65202885305463 37.0 35.0 40.0 30.0 41.0 48-49 35.59532189154032 36.5 35.0 40.0 30.0 41.0 50-51 35.397942832152154 36.0 35.0 40.0 30.0 41.0 52-53 35.205006952543286 36.0 34.5 40.0 29.0 41.0 54-55 35.05280765004037 35.5 34.0 40.0 29.0 41.0 56-57 34.76537885754014 35.0 34.0 39.5 28.5 41.0 58-59 34.471228805956756 35.0 34.0 39.0 27.0 41.0 60-61 34.198812460751775 35.0 34.0 39.0 26.5 40.5 62-63 33.77769467121199 35.0 33.5 38.0 26.0 40.0 64-65 33.576002792231094 35.0 33.0 37.5 26.0 40.0 66-67 33.36625773750785 35.0 33.0 37.0 26.0 40.0 68-69 33.07310431057684 35.0 33.0 36.5 25.0 39.0 70-71 32.89704320669239 35.0 33.0 36.0 25.0 39.0 72-73 32.682347829012286 35.0 33.0 36.0 25.0 38.5 74-75 32.42150662734368 35.0 33.0 35.0 25.0 37.5 76-77 30.42135075580874 33.0 30.0 34.5 20.0 35.5 78-79 31.457209899524536 34.0 31.5 35.0 22.5 36.0 80-81 31.869090898896566 35.0 32.5 35.0 24.0 36.0 82-83 31.77526744864089 35.0 32.5 35.0 23.5 36.0 84-85 31.620234704404773 35.0 32.0 35.0 23.0 36.0 86 31.193591325020186 34.0 31.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 3.0 10 3.0 11 18.0 12 39.0 13 84.0 14 262.0 15 784.0 16 2028.0 17 4167.0 18 7799.0 19 11624.0 20 14093.0 21 14635.0 22 12914.0 23 11605.0 24 12091.0 25 13748.0 26 16476.0 27 20142.0 28 24399.0 29 30575.0 30 37872.0 31 48441.0 32 62423.0 33 90314.0 34 261470.0 35 232428.0 36 140815.0 37 247286.0 38 314731.0 39 149724.0 40 522.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.11703821656051 22.666804969947073 30.100531533147933 14.115625280344487 2 29.294989683322868 25.91896922938907 30.85639633982237 13.929644747465685 3 29.023560150713195 24.865434646093117 32.404458598726116 13.70654660446757 4 26.048151969139678 27.03406746209743 31.53780165066834 15.379978918094556 5 24.74028886695972 30.773806853862023 29.473681259531716 15.012223019646543 6 22.58079528124159 39.63415044406567 26.498160940163274 11.28689333452947 7 87.96419440208128 4.196588768278461 5.943303130887234 1.8959136987530278 8 88.97792006817978 3.5426572171884816 5.758331838162734 1.7210908764690052 9 85.31600430609132 4.873901049609761 7.3262424867677405 2.483852157531174 10-11 48.21594375168207 23.036579348703686 17.454584193056426 11.292892706557819 12-13 33.99056360455728 27.62430474567148 23.138484569839417 15.246647079931822 14-15 15.18171929667175 32.899715170000896 35.914764062079485 16.00380147124787 16-17 19.922372611464965 22.496635866152328 34.82663496904997 22.754356553332737 18-19 25.83951960168655 26.032116264465778 29.843343500493408 18.285020633354264 20-21 28.45443280703328 27.253717367901675 26.998856194491793 17.292993630573246 22-23 22.200676190903383 24.342536108369963 29.307100565174487 24.149687135552167 24-25 20.029828653449357 24.920522337848748 35.73668924374271 19.31295976495918 26-27 17.004575222032834 35.799290167758144 28.11106687898089 19.085067731228133 28-29 15.777423297748271 28.160884094375167 37.433754597649596 18.627938010226966 30-31 23.62115367363416 28.763204225352112 29.5968926617027 18.018749439311023 32-33 28.868838028169012 27.59094375168207 26.43356957028797 17.10664864986095 34-35 19.786994258544897 29.200401453305822 29.01764488203104 21.994959406118237 36-37 24.385597021620168 29.95735960348076 28.935952498430073 16.721090876469006 38-39 20.416816183726564 31.535530860321163 26.937012200592086 21.110640755360187 40-41 21.728912487664843 26.069402081277477 27.65923566878981 24.542449762267875 42-43 21.803315914595856 24.650746837714184 27.45368709069705 26.092250156992915 44-45 19.871405983672737 32.252904368888494 27.260922221225442 20.614767426213334 46-47 21.563144792320806 31.091100744594957 26.110052031936842 21.235702431147395 48-49 22.275612272360277 25.255365793487037 31.95024446039293 20.518777473759755 50-51 19.36754283663766 32.97596887054813 26.973204673903297 20.683283618910917 52-53 23.184096617924105 25.745043509464434 29.64881246075177 21.422047411859694 54-55 23.801162868933346 27.05952274154481 30.049340629765858 19.08997375975599 56-57 24.066957477348165 24.286831658742262 27.939664259442004 23.706546604467572 58-59 25.690965057863103 26.39894702610568 26.508197272808825 21.40189064322239 60-61 26.302200143536375 29.43510585807841 25.024894590472773 19.237799407912444 62-63 24.447300843276217 24.314053108459674 30.56147393917646 20.677172109087646 64-65 19.590472772943393 30.455195344038756 30.559483493316584 19.394848389701263 66-67 18.81170382165605 28.368226877186686 24.693779716515653 28.126289584641604 68-69 18.235848210280793 32.67457051224545 23.42398739571185 25.66559388176191 70-71 19.53238539517359 29.724309231183277 28.60335179869023 22.1399535749529 72-73 24.06967681887503 29.814355880505968 25.667219879788284 20.448747420830717 74-75 22.88726787476451 32.13002938010227 23.4207353996591 21.561967345474116 76-77 28.98658271283753 26.24722458957567 25.025287072755003 19.740905624831793 78-79 19.506537633443976 28.6727650937472 30.435823539965913 21.38487373284292 80-81 16.365614066564994 27.72329438413923 31.80163384767202 24.109457701623754 82-83 18.737188256930114 25.887458509015875 32.28783529200682 23.087517942047185 84-85 16.52927917825424 25.883141203911364 29.07433053736431 28.513249080470082 86 19.036063514847044 25.08057100565175 32.91765721718848 22.96570826231273 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 708.0 1 1066.0 2 3429.5 3 3461.5 4 1630.5 5 1955.0 6 2344.5 7 2552.0 8 2623.0 9 2696.0 10 2687.0 11 2732.5 12 2837.0 13 2956.5 14 3028.0 15 3194.5 16 3463.0 17 3588.5 18 3912.5 19 4761.5 20 4631.5 21 3953.0 22 4088.5 23 4360.5 24 5121.0 25 7123.5 26 10575.0 27 11863.5 28 13609.0 29 16139.0 30 18860.5 31 24279.0 32 26295.0 33 24889.0 34 29305.0 35 36415.5 36 38385.0 37 41146.5 38 43643.0 39 47269.5 40 59479.5 41 77596.0 42 91187.5 43 94981.0 44 100696.5 45 106920.5 46 110879.5 47 118797.5 48 118803.5 49 99471.0 50 84600.0 51 73731.0 52 57528.0 53 50918.0 54 49326.0 55 48564.0 56 46967.0 57 45816.0 58 41166.5 59 31706.5 60 23048.5 61 18279.0 62 15172.5 63 11388.0 64 9788.0 65 8511.0 66 5835.5 67 3607.0 68 2806.0 69 2411.5 70 1729.5 71 1471.0 72 1221.5 73 938.0 74 613.5 75 313.0 76 228.5 77 192.0 78 145.5 79 61.0 80 52.5 81 39.0 82 26.0 83 12.5 84 10.0 85 11.5 86 10.0 87 6.5 88 2.5 89 2.0 90 2.5 91 2.0 92 1.5 93 2.0 94 1.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1783520.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.490993947825956 #Duplication Level Percentage of deduplicated Percentage of total 1 81.389801228603 11.794191170184437 2 8.643520718941012 2.5050641285216493 3 2.487620089102511 1.0814426296702426 4 1.0761805127301134 0.6237970118696123 5 0.6189232867167088 0.4484406800990189 6 0.40541547174925296 0.35249238884840584 7 0.2952387248105753 0.299481180207573 8 0.22694080098476158 0.2630878218867964 9 0.17665085872717018 0.23038618722243132 >10 1.8230023853664816 6.141483278794644 >50 0.8189794001686944 8.734009549395894 >100 2.0186714458434474 65.14900866357613 >500 0.01749955982719228 1.5480017437852953 >1k 0.0011666373218128187 0.34769460353677734 >5k 3.888791072709396E-4 0.48141896240108406 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8543 0.4789965910110343 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3304 0.18525163721180585 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.6068897461200325E-5 0.0 0.0 0.0348187853234054 0.0 2 5.6068897461200325E-5 0.0 0.0 0.1029424957387638 0.0 3 5.6068897461200325E-5 0.0 0.0 0.14527451332197003 0.0 4 5.6068897461200325E-5 0.0 0.0 0.21216470799318202 0.0 5 5.6068897461200325E-5 0.0 0.0 0.34073068987171434 0.0 6 5.6068897461200325E-5 0.0 0.0 0.4543823450255674 0.0 7 5.6068897461200325E-5 0.0 0.0 0.520319368439939 0.0 8 5.6068897461200325E-5 0.0 0.0 0.6589216829640262 0.0 9 5.6068897461200325E-5 0.0 0.0 0.7007490804700817 0.0 10 5.6068897461200325E-5 0.0 0.0 0.7891136628689334 0.0 11 5.6068897461200325E-5 0.0 0.0 0.9705526150533776 0.0 12 5.6068897461200325E-5 0.0 0.0 1.110612720911456 0.0 13 5.6068897461200325E-5 0.0 0.0 1.1657845160132772 0.0 14 1.1213779492240065E-4 0.0 0.0 1.1886045572799857 0.0 15 1.1213779492240065E-4 0.0 0.0 1.2260585807840674 0.0 16 1.1213779492240065E-4 0.0 0.0 1.3050596573068987 0.0 17 1.1213779492240065E-4 0.0 0.0 1.4007692652731676 0.0 18 1.1213779492240065E-4 0.0 0.0 1.513075266887952 0.0 19 1.1213779492240065E-4 0.0 0.0 1.5887122095631112 0.0 20 1.1213779492240065E-4 0.0 0.0 1.6671525971113303 0.0 21 1.1213779492240065E-4 0.0 0.0 1.7704315062348615 0.0 22 1.1213779492240065E-4 0.0 0.0 1.8751682066923836 0.0 23 1.1213779492240065E-4 0.0 0.0 1.9851193146137975 0.0 24 1.1213779492240065E-4 0.0 0.0 2.068325558446219 0.0 25 1.1213779492240065E-4 0.0 0.0 2.1424486408899255 0.0 26 1.1213779492240065E-4 0.0 0.0 2.225206333542657 0.0 27 1.1213779492240065E-4 0.0 0.0 2.3135709159415088 0.0 28 1.1213779492240065E-4 0.0 0.0 2.3968332286713916 0.0 29 1.1213779492240065E-4 0.0 0.0 2.5012335157441465 0.0 30 1.1213779492240065E-4 0.0 0.0 2.6159504799497624 0.0 31 1.1213779492240065E-4 0.0 0.0 2.7248923477168745 0.0 32 1.1213779492240065E-4 0.0 0.0 2.8236296761460484 0.0 33 1.1213779492240065E-4 0.0 0.0 2.9198999730869293 0.0 34 1.1213779492240065E-4 0.0 0.0 3.034000179420472 0.0 35 1.1213779492240065E-4 0.0 0.0 3.1715932537902574 0.0 36 1.1213779492240065E-4 0.0 0.0 3.282946084148201 0.0 37 1.1213779492240065E-4 0.0 0.0 3.4083722077689065 0.0 38 1.1213779492240065E-4 0.0 0.0 3.555833408091863 0.0 39 1.1213779492240065E-4 0.0 0.0 3.8139185431057685 0.0 40 1.1213779492240065E-4 0.0 0.0 3.972313178433659 0.0 41 1.1213779492240065E-4 0.0 0.0 4.1211761011931465 0.0 42 1.1213779492240065E-4 0.0 0.0 4.276318740468287 0.0 43 1.1213779492240065E-4 0.0 0.0 4.395296940880955 0.0 44 1.1213779492240065E-4 0.0 0.0 4.516686103884453 0.0 45 1.1213779492240065E-4 0.0 0.0 4.649008701892886 0.0 46 1.1213779492240065E-4 0.0 0.0 4.815421189557728 0.0 47 1.1213779492240065E-4 0.0 0.0 4.986094913429622 0.0 48 1.1213779492240065E-4 0.0 0.0 5.138434107831704 0.0 49 1.1213779492240065E-4 0.0 0.0 5.288642684130259 5.6068897461200325E-5 50 1.1213779492240065E-4 0.0 0.0 5.4502893155109 5.6068897461200325E-5 51 1.1213779492240065E-4 0.0 0.0 5.617598905535122 5.6068897461200325E-5 52 1.1213779492240065E-4 0.0 0.0 5.820287969857361 5.6068897461200325E-5 53 1.1213779492240065E-4 0.0 0.0 5.997353548039832 5.6068897461200325E-5 54 1.1213779492240065E-4 0.0 0.0 6.176325468735983 5.6068897461200325E-5 55 1.1213779492240065E-4 0.0 0.0 6.348681259531713 5.6068897461200325E-5 56 1.1213779492240065E-4 0.0 0.0 6.5251861487395715 5.6068897461200325E-5 57 1.1213779492240065E-4 0.0 0.0 6.703709518256033 5.6068897461200325E-5 58 1.1213779492240065E-4 0.0 0.0 6.870234143715798 5.6068897461200325E-5 59 1.6820669238360096E-4 0.0 0.0 7.060756257288957 5.6068897461200325E-5 60 1.6820669238360096E-4 0.0 0.0 7.264118148380731 5.6068897461200325E-5 61 1.6820669238360096E-4 0.0 0.0 7.463499147752759 5.6068897461200325E-5 62 2.242755898448013E-4 0.0 0.0 7.71765945994438 5.6068897461200325E-5 63 2.803444873060016E-4 0.0 0.0 7.961334888310756 5.6068897461200325E-5 64 3.364133847672019E-4 0.0 0.0 8.186339373822554 5.6068897461200325E-5 65 3.364133847672019E-4 0.0 0.0 8.389252713734637 5.6068897461200325E-5 66 3.364133847672019E-4 0.0 0.0 8.577812415896654 5.6068897461200325E-5 67 3.364133847672019E-4 0.0 0.0 8.778370862115368 5.6068897461200325E-5 68 3.364133847672019E-4 0.0 0.0 9.030961245178075 5.6068897461200325E-5 69 3.9248228222840226E-4 0.0 0.0 9.400287072755 5.6068897461200325E-5 70 3.9248228222840226E-4 0.0 0.0 9.622880595675966 5.6068897461200325E-5 71 3.9248228222840226E-4 0.0 0.0 9.847380461110612 5.6068897461200325E-5 72 3.9248228222840226E-4 0.0 0.0 10.060890822642863 5.6068897461200325E-5 73 4.485511796896026E-4 0.0 0.0 10.294978469543375 5.6068897461200325E-5 74 4.485511796896026E-4 0.0 0.0 10.555530636045573 5.6068897461200325E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTACG 15 0.0013099099 80.00001 80 TAGCGCG 20 4.0915198E-5 80.0 1 GCGATAA 50 0.0 80.0 9 TATAGCG 215 0.0 74.4186 1 TCGATAG 65 0.0 73.84615 1 GTTAGCG 155 0.0 72.258064 1 TACGTAG 100 0.0 68.0 1 CGTTTTT 4915 0.0 67.222786 1 TAACGCG 155 0.0 67.09678 1 TGTAGCG 155 0.0 67.09678 1 GGATACG 110 0.0 65.454544 1 GCGTAAG 215 0.0 65.11628 1 GCGAGGG 1515 0.0 64.9505 3 TTAAGCG 340 0.0 64.70588 80 GTACGGG 700 0.0 64.57143 3 AAGTACT 6680 0.0 64.43114 80 ATACCGG 75 0.0 63.999996 2 CGAGGGA 790 0.0 63.291138 4 CCGCGAG 70 0.0 62.857143 1 TAGTAGG 1395 0.0 62.7957 2 >>END_MODULE