##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547743_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 886915 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53773585969343 31.0 31.0 33.0 30.0 34.0 2 31.946355625961903 31.0 31.0 34.0 30.0 34.0 3 32.081685392625 33.0 31.0 34.0 30.0 34.0 4 35.73806509079224 37.0 35.0 37.0 33.0 37.0 5 35.61393932902251 37.0 35.0 37.0 33.0 37.0 6 35.674517851203326 37.0 35.0 37.0 33.0 37.0 7 36.06685533562968 37.0 35.0 37.0 35.0 37.0 8 36.09478022132899 37.0 35.0 37.0 35.0 37.0 9 37.89650642959021 39.0 38.0 39.0 35.0 39.0 10 37.28086231487798 39.0 37.0 39.0 34.0 39.0 11 36.93872017047857 39.0 37.0 39.0 33.0 39.0 12 36.19053798842054 38.0 35.0 39.0 32.0 39.0 13 35.81885637293315 38.0 35.0 39.0 31.0 39.0 14 36.740423828664525 39.0 35.0 41.0 31.0 41.0 15 37.035356263001525 39.0 35.0 41.0 32.0 41.0 16 37.20468026812039 39.0 35.0 41.0 32.0 41.0 17 37.17146738977242 39.0 35.0 41.0 32.0 41.0 18 37.08350856620984 38.0 35.0 41.0 32.0 41.0 19 37.022560222794745 38.0 35.0 41.0 32.0 41.0 20 36.86443007503537 38.0 35.0 41.0 32.0 41.0 21 36.724193411995515 38.0 35.0 41.0 31.0 41.0 22 36.68193569846039 38.0 35.0 41.0 31.0 41.0 23 36.650686931667636 38.0 35.0 40.0 31.0 41.0 24 36.54390330527728 38.0 35.0 40.0 31.0 41.0 25 36.418871030482066 38.0 35.0 40.0 31.0 41.0 26 36.28239910250701 38.0 35.0 40.0 31.0 41.0 27 36.247372070604285 38.0 35.0 40.0 31.0 41.0 28 36.32102625392512 38.0 35.0 40.0 31.0 41.0 29 36.31678683977608 38.0 35.0 40.0 31.0 41.0 30 36.34060084675533 38.0 35.0 40.0 31.0 41.0 31 36.183240784066115 38.0 35.0 40.0 30.0 41.0 32 36.0043048093673 38.0 35.0 40.0 30.0 41.0 33 35.90251940715852 38.0 35.0 40.0 30.0 41.0 34 35.71080543231313 38.0 35.0 40.0 29.0 41.0 35 35.61794196738131 38.0 35.0 40.0 29.0 41.0 36 35.45113793317285 38.0 34.0 40.0 28.0 41.0 37 35.24452737861013 37.0 34.0 40.0 27.0 41.0 38 35.33291578110642 37.0 34.0 40.0 28.0 41.0 39 35.262274287840434 37.0 34.0 40.0 27.0 41.0 40 35.117607662515574 37.0 34.0 40.0 27.0 41.0 41 35.09074375785729 37.0 34.0 40.0 27.0 41.0 42 35.07570398516205 37.0 34.0 40.0 27.0 41.0 43 35.00652260926921 37.0 34.0 40.0 27.0 41.0 44 34.866548654606135 36.0 34.0 40.0 26.0 41.0 45 34.81954527773237 36.0 34.0 40.0 26.0 41.0 46 34.668953620132704 36.0 34.0 40.0 26.0 41.0 47 34.680701081839864 36.0 34.0 40.0 26.0 41.0 48 34.557402907832206 36.0 34.0 40.0 26.0 41.0 49 34.572720046453156 36.0 34.0 40.0 26.0 41.0 50 34.446004408539714 35.0 34.0 40.0 26.0 41.0 51 33.7458065316293 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 4.0 13 7.0 14 10.0 15 21.0 16 71.0 17 185.0 18 338.0 19 753.0 20 1303.0 21 2023.0 22 3057.0 23 4553.0 24 6558.0 25 9399.0 26 12311.0 27 14981.0 28 16427.0 29 18676.0 30 21862.0 31 26392.0 32 32999.0 33 43811.0 34 77696.0 35 121998.0 36 60575.0 37 76769.0 38 115318.0 39 218656.0 40 158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.37704289588066 23.783677128022415 29.116093424961804 13.723186551135115 2 30.347553034958253 25.102292778902154 29.805449225686793 14.744704960452806 3 30.144602357610367 25.077600446491488 30.853463973436014 13.92433322246213 4 25.33974507139918 27.59306134184223 31.19859287530372 15.868600711454874 5 23.715012148853045 31.597616457044925 30.870940281763193 13.816431112338837 6 22.360203627179605 40.18603812090223 26.82196151829657 10.631796733621599 7 88.48401481539945 3.431670453200138 6.562748403172796 1.5215663282276204 8 88.69846603113038 2.7700512450460306 6.42259968542645 2.1088830383971406 9 84.17266592627253 5.019308501942126 7.901997372916232 2.9060281988691137 10 48.06187740651585 26.97338527367335 13.808313085244922 11.156424234565883 11 39.75420417965645 23.27066291583748 22.23832047039457 14.7368124341115 12 38.41067069561345 20.744716235490436 25.07038442240801 15.774228646488108 13 24.281131788277342 31.783429077194548 26.334992643037946 17.600446491490164 14 17.488259867067306 36.19264529295367 28.673773698719717 17.64532114125931 15 16.098385978363204 26.3697197589397 41.496084743182834 16.03580951951427 16 20.735921706138694 22.646364082240126 39.0836776917743 17.534036519846886 17 20.999757586690944 23.27133941809531 26.664223741846737 29.06467925336701 18 23.232440538270296 25.982647717086753 31.633358326333415 19.151553418309533 19 28.42662487386052 26.685420812591964 25.663000400263837 19.224953913283684 20 29.215764757614878 26.84045258001049 26.911372566705943 17.032410095668695 21 24.864051233770994 26.517310001522134 29.989908841320755 18.62872992338612 22 24.21280506023689 23.38792330719404 28.950575872546974 23.448695760022098 23 21.410507207567804 27.757902391999234 28.52099693882728 22.31059346160568 24 21.97200408156362 25.615081490334475 34.44805872039598 17.964855707705922 25 21.333949702057133 26.4135796553221 31.81161667127064 20.44085397135013 26 19.55294475795313 32.572005209067385 26.478974873578643 21.396075159400844 27 19.702339006556436 32.196659206350105 29.746931780384816 18.354070006708646 28 16.797551061826667 28.745257437296694 35.065479781038775 19.391711719837865 29 17.931368845943524 26.17872062148007 35.01203610267049 20.87787442990591 30 20.343212145470535 29.170439106340517 31.361855420192462 19.124493327996483 31 26.60119628149259 26.607848553694545 26.16158256428181 20.629372600531052 32 27.22402936019799 27.650113032252243 26.740330245852196 18.38552736169757 33 25.867191331751073 26.688690573504786 27.03460872800663 20.40950936673751 34 20.51707322573189 27.982839392726472 28.127272624772388 23.37281475676925 35 21.24532790628189 27.47298219107806 29.05983098718592 22.221858915454128 36 27.736930822006617 26.350439444591643 27.223578358692773 18.689051374708963 37 21.16426038571904 30.25712723316214 29.049683453318526 19.528928927800298 38 21.33496445544387 30.583652322939624 25.89571717695608 22.185666044660422 39 21.0578240304877 28.865111087308254 28.15241595868826 21.924648923515782 40 23.869141913261135 26.42744795160754 27.326406701882366 22.37700343324896 41 19.157641938629972 24.441575573758477 29.460996826076908 26.939785661534643 42 22.207426867287168 25.657475631824923 26.634344892126077 25.500752608761836 43 22.67815968835796 25.18110529193891 27.823410360632078 24.317324659071048 44 21.463725385183473 27.692732674495304 28.602177209766438 22.24136473055479 45 20.122559659042864 31.372679456317687 25.295885175016767 23.20887570962268 46 22.48975380955334 30.541258181449184 25.83550847600954 21.13347953298794 47 21.236420626553844 27.684840148153995 27.82814587643686 23.250593348855304 48 22.827328436208656 25.743053167439946 30.441925099925022 20.987693296426375 49 22.116888315114753 24.692445161035725 30.379574141828698 22.811092382020824 50 19.371642152855685 28.274975617731123 29.814469255791142 22.53891297362205 51 19.076799918819727 30.46357317217546 26.10915363930027 24.350473269704537 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 846.0 1 1201.5 2 1557.0 3 5287.0 4 9017.0 5 6151.5 6 3286.0 7 3440.5 8 3595.0 9 3865.5 10 4136.0 11 4154.5 12 4173.0 13 4010.5 14 3848.0 15 3810.5 16 3773.0 17 3586.5 18 3400.0 19 3556.0 20 3712.0 21 4033.5 22 4355.0 23 3767.0 24 3179.0 25 3975.5 26 6083.5 27 7395.0 28 10289.5 29 13184.0 30 13310.0 31 13436.0 32 16313.5 33 19191.0 34 22590.5 35 25990.0 36 27531.0 37 29072.0 38 32691.5 39 36311.0 40 44789.5 41 53268.0 42 62217.5 43 71167.0 44 73701.5 45 76236.0 46 75624.5 47 75013.0 48 73496.0 49 71979.0 50 66951.0 51 61923.0 52 58492.5 53 55062.0 54 50321.0 55 45580.0 56 43703.5 57 41827.0 58 39228.5 59 36630.0 60 33071.0 61 29512.0 62 26079.5 63 22647.0 64 20064.5 65 17482.0 66 14589.0 67 11696.0 68 9437.5 69 7179.0 70 5868.5 71 4558.0 72 4092.0 73 3626.0 74 2547.5 75 1189.0 76 909.0 77 635.0 78 361.0 79 376.0 80 391.0 81 257.5 82 124.0 83 74.5 84 25.0 85 16.0 86 7.0 87 5.0 88 3.0 89 2.0 90 1.0 91 2.0 92 3.0 93 5.5 94 8.0 95 4.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 886915.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.615917692334335 #Duplication Level Percentage of deduplicated Percentage of total 1 81.79114727261334 16.044084128611793 2 7.653367980965998 3.00255672767552 3 2.4219924120978327 1.4252881142150817 4 1.14832776306871 0.901020115367129 5 0.6574773592413171 0.6448510881725505 6 0.4231429977594318 0.49802029296819766 7 0.3190271360155339 0.43806070291913046 8 0.24495606388668092 0.38440303899514594 9 0.19019853740692283 0.33578269694789137 >10 2.3712799692465523 11.015479555447241 >50 1.2541944525912825 18.096807540289298 >100 1.5173848209215286 45.46952953166375 >500 0.006348890464106814 0.861019521548915 >1k 5.771718603733467E-4 0.227114419490746 >5k 5.771718603733467E-4 0.6559825256876284 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5794 0.6532756803075831 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2006 0.2261772548665881 No Hit CTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGCT 911 0.10271559281329103 No Hit CCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 906 0.10215184093176911 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11252487555177215 0.0 2 0.0 0.0 0.0 0.3753460027172841 0.0 3 0.0 0.0 0.0 0.5130142121849331 0.0 4 0.0 0.0 0.0 0.7562167738734829 0.0 5 0.0 0.0 0.0 1.2221013287631848 0.0 6 0.0 0.0 0.0 1.5754610081011144 0.0 7 0.0 0.0 0.0 1.7749164237835644 0.0 8 0.0 0.0 0.0 2.1502624265008485 0.0 9 0.0 0.0 0.0 2.269326823878275 0.0 10 0.0 0.0 0.0 2.5239171735735666 0.0 11 0.0 0.0 0.0 2.962065135892391 0.0 12 0.0 0.0 0.0 3.270437415084873 0.0 13 0.0 0.0 0.0 3.399874847082302 0.0 14 0.0 0.0 0.0 3.46132380216819 0.0 15 0.0 0.0 0.0 3.5642648957340897 0.0 16 0.0 0.0 0.0 3.76450956405067 0.0 17 0.0 0.0 0.0 3.99587333622726 0.0 18 0.0 0.0 0.0 4.272675510054515 0.0 19 0.0 0.0 0.0 4.436389056448476 0.0 20 1.1275037630438092E-4 0.0 0.0 4.592548327630044 0.0 21 1.1275037630438092E-4 0.0 0.0 4.811509558413151 0.0 22 1.1275037630438092E-4 0.0 0.0 5.0235930162416915 0.0 23 1.1275037630438092E-4 0.0 0.0 5.243117998906321 0.0 24 1.1275037630438092E-4 0.0 0.0 5.412130812986589 0.0 25 1.1275037630438092E-4 0.0 0.0 5.553407034495978 0.0 26 1.1275037630438092E-4 0.0 0.0 5.694006753747541 0.0 27 1.1275037630438092E-4 0.0 0.0 5.862794067075199 0.0 28 1.1275037630438092E-4 0.0 0.0 6.016360079601766 0.0 29 1.1275037630438092E-4 0.0 0.0 6.192814418518122 0.0 30 1.1275037630438092E-4 0.0 0.0 6.384151807106656 0.0 31 1.1275037630438092E-4 0.0 0.0 6.560380645270404 0.0 32 1.1275037630438092E-4 0.0 0.0 6.719133175106972 0.0 33 1.1275037630438092E-4 0.0 0.0 6.868301922957668 0.0 34 1.1275037630438092E-4 0.0 0.0 7.052310537086417 0.0 35 1.1275037630438092E-4 0.0 0.0 7.271271767869525 0.0 36 1.1275037630438092E-4 0.0 0.0 7.4303625488350065 0.0 37 1.1275037630438092E-4 0.0 0.0 7.609410146406364 0.0 38 1.1275037630438092E-4 0.0 0.0 7.81213532300164 0.0 39 1.1275037630438092E-4 0.0 0.0 8.157264224869351 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACTCC 35 1.2115015E-7 45.000004 36 CGTTAGG 195 0.0 45.000004 2 CCACTAG 35 1.2115015E-7 45.000004 10 GCGATAT 95 0.0 45.000004 9 TATAGCG 35 1.2115015E-7 45.000004 1 CCACGTA 35 1.2115015E-7 45.000004 19 TCCGGAC 25 3.890082E-5 45.0 15 GATACGT 20 7.0324144E-4 45.0 22 CCTTACG 25 3.890082E-5 45.0 17 CTACTTA 25 3.890082E-5 45.0 23 CTCGTCT 25 3.890082E-5 45.0 40 CTATCGT 20 7.0324144E-4 45.0 31 ACGTTAG 45 3.8380676E-10 45.0 1 ACGCACG 20 7.0324144E-4 45.0 41 CACGCGA 20 7.0324144E-4 45.0 41 CAACCGA 20 7.0324144E-4 45.0 44 ACCGAAT 20 7.0324144E-4 45.0 2 TGAACGA 40 6.8121153E-9 45.0 27 CACGATT 20 7.0324144E-4 45.0 10 CGACATA 20 7.0324144E-4 45.0 30 >>END_MODULE