##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547742_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1431063 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.520620685462486 31.0 31.0 33.0 30.0 34.0 2 31.93787415368855 31.0 31.0 34.0 30.0 34.0 3 32.0920958755834 33.0 31.0 34.0 30.0 34.0 4 35.776357155485115 37.0 35.0 37.0 35.0 37.0 5 35.656522459178944 37.0 35.0 37.0 33.0 37.0 6 35.69105063858125 37.0 35.0 37.0 33.0 37.0 7 36.05047646399914 37.0 35.0 37.0 35.0 37.0 8 36.060823318050986 37.0 35.0 37.0 35.0 37.0 9 37.862780324835455 39.0 38.0 39.0 35.0 39.0 10 37.24488230077921 39.0 37.0 39.0 34.0 39.0 11 36.96357812339499 39.0 37.0 39.0 33.0 39.0 12 36.57396914042219 39.0 35.0 39.0 32.0 39.0 13 36.43900932383829 39.0 35.0 39.0 32.0 39.0 14 37.51216962495711 40.0 36.0 41.0 32.0 41.0 15 37.665035012434814 40.0 36.0 41.0 32.0 41.0 16 37.74138245486048 40.0 36.0 41.0 33.0 41.0 17 37.678099426789736 40.0 36.0 41.0 33.0 41.0 18 37.56366910471447 39.0 36.0 41.0 32.0 41.0 19 37.51811136197358 39.0 36.0 41.0 32.0 41.0 20 37.38423046364835 39.0 35.0 41.0 32.0 41.0 21 37.292590193443615 39.0 35.0 41.0 32.0 41.0 22 37.22120130280777 39.0 35.0 41.0 32.0 41.0 23 37.12971686082304 39.0 35.0 41.0 32.0 41.0 24 37.044023219103565 39.0 35.0 41.0 32.0 41.0 25 36.960186239180246 39.0 35.0 41.0 31.0 41.0 26 36.8537401917316 39.0 35.0 41.0 31.0 41.0 27 36.807656965486494 39.0 35.0 41.0 31.0 41.0 28 36.812407280462146 39.0 35.0 41.0 31.0 41.0 29 36.79520887619902 39.0 35.0 41.0 31.0 41.0 30 36.792697456366355 39.0 35.0 41.0 31.0 41.0 31 36.68589293413358 39.0 35.0 41.0 31.0 41.0 32 36.52403423189615 39.0 35.0 41.0 30.0 41.0 33 36.40778428343127 39.0 35.0 41.0 30.0 41.0 34 36.21712810686881 39.0 35.0 41.0 30.0 41.0 35 36.11452325998226 39.0 35.0 41.0 30.0 41.0 36 35.99976590827937 39.0 35.0 41.0 29.0 41.0 37 35.78027592076659 38.0 35.0 41.0 28.0 41.0 38 35.83519523598891 38.0 35.0 41.0 29.0 41.0 39 35.71721231001011 38.0 35.0 41.0 28.0 41.0 40 35.58937027929588 38.0 35.0 41.0 27.0 41.0 41 35.50465493133426 38.0 35.0 40.0 27.0 41.0 42 35.48508556227085 38.0 35.0 40.0 27.0 41.0 43 35.43539033571548 38.0 34.0 40.0 27.0 41.0 44 35.29430220751986 38.0 34.0 40.0 27.0 41.0 45 35.25461842001366 38.0 34.0 40.0 27.0 41.0 46 35.05009213430855 38.0 34.0 40.0 26.0 41.0 47 35.08176788862545 37.0 34.0 40.0 26.0 41.0 48 34.911328152569105 37.0 34.0 40.0 26.0 41.0 49 34.86559291938929 37.0 34.0 40.0 26.0 41.0 50 34.77140908541413 37.0 34.0 40.0 26.0 41.0 51 34.08498298118252 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 2.0 12 7.0 13 14.0 14 32.0 15 62.0 16 129.0 17 297.0 18 621.0 19 1176.0 20 2028.0 21 3139.0 22 4655.0 23 6783.0 24 9665.0 25 13985.0 26 18680.0 27 22776.0 28 24957.0 29 28145.0 30 32019.0 31 39142.0 32 48321.0 33 62792.0 34 102295.0 35 132277.0 36 107831.0 37 143287.0 38 213901.0 39 411815.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.7894537137778 24.228073816456718 25.85735219204186 15.125120277723623 2 29.912519574609924 26.478289215778762 29.66333417885865 13.945857030752665 3 28.298963777276054 26.471860428227128 31.41538842105484 13.81378737344198 4 26.666471007915092 27.53170195861398 31.162499484648826 14.639327548822099 5 24.37397934262852 31.690219088887073 29.396469617340397 14.53933195114401 6 23.394288022260376 39.393304138252475 26.4872336158506 10.725174223636555 7 87.0678649367638 3.8562942372208626 7.172360685728021 1.903480140287325 8 86.78045620633054 3.5503678035138915 7.262852858329786 2.4063231318257827 9 82.24885976368616 5.84313898130271 8.604792381607238 3.3032088734038965 10 41.37029606663019 33.003857971312236 15.12036856518546 10.505477396872115 11 30.689773965227246 23.815583241268904 28.16703387621649 17.32760891728736 12 31.141466168854897 21.341059058895382 29.438606127053806 18.078868645195914 13 25.283443146807656 25.547233070801216 28.303086586684163 20.86623719570697 14 18.75843341627867 26.87331025957627 30.639391836697616 23.728864487447442 15 18.289481315637396 28.82717252839323 33.262826304642076 19.620519851327302 16 23.130637854517936 26.802593596508327 30.723594977998875 19.343173570974862 17 23.687566515240768 28.00107332800862 27.105235758313924 21.20612439843669 18 23.927248485915715 27.55413283691913 29.148891418477035 19.369727258688123 19 25.020142369693016 28.031889581381115 26.28214131732845 20.66582673159742 20 25.95692852096658 26.89441345349576 29.370125564003818 17.77853246153384 21 25.89739235798843 26.32895966145446 29.91342799024222 17.860219990314892 22 26.22861467314856 21.691218346082596 30.36616836575329 21.71399861501555 23 23.22979491468929 25.762807088157547 30.49306704177244 20.51433095538072 24 21.164756548104453 25.861684635826656 33.38944546815898 19.58411334790991 25 21.747330480908246 29.325822832398014 28.25955251445953 20.667294172234207 26 20.966861696515107 30.296569752694325 26.360963842961493 22.375604707829076 27 19.99164257618288 30.81534495686074 29.59792825333336 19.59508421362302 28 18.213244280650116 28.269475208289226 32.2215723556545 21.295708155406157 29 19.45616650000734 26.500929728460594 31.461507983925234 22.581395787606834 30 21.137923347888947 28.26297654261203 30.567696879871814 20.031403229627205 31 24.01648285225738 27.49410752706205 28.010716509336063 20.478693111344505 32 24.213958435093353 26.789037240149455 27.424928182756453 21.572076142000736 33 23.39980839417971 27.282306928486026 27.5894911684531 21.72839350888116 34 21.160633738696337 26.169218266421534 30.121874438791302 22.548273556090823 35 22.19021804071519 26.468506278200195 29.244344937993645 22.096930743090976 36 24.657474898030348 28.058792659722176 26.857238290697193 20.42649415155028 37 21.37851373419619 28.469536281770964 28.96371438573983 21.18823559829302 38 21.835796187868738 27.980459280968063 28.60838411726109 21.575360413902114 39 21.281383139666108 28.463736397349383 28.292115720971054 21.962764742013455 40 24.431209527463153 26.893644794114586 27.865719398796557 20.809426279625704 41 20.156205561879524 25.76259745378086 30.651550630545266 23.429646353794347 42 20.777002829365305 26.066357665595437 28.937090819901012 24.21954868513825 43 21.867450978747964 27.383141063670852 27.933431302465372 22.815976655115815 44 21.189004257674192 27.520102189770824 28.031120921999943 23.259772630555048 45 20.92947689933986 29.365583485842343 26.489958862747482 23.214980752070314 46 21.059310456632588 29.68276029776467 26.82977618735164 22.428153058251105 47 20.835420942334473 26.94668229141554 30.992625761409524 21.225271004840458 48 21.05518764722448 26.472070062603812 31.630333535281117 20.842408754890595 49 21.908050169699028 27.541764408694796 28.869658428734446 21.680526992871734 50 20.7049584819117 26.69435238001402 30.614934492751196 21.98575464532309 51 20.085139508183776 27.9650860933446 28.976641838968654 22.97313255950297 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1565.0 1 2916.5 2 4268.0 3 9963.0 4 15658.0 5 11176.5 6 6695.0 7 6720.0 8 6745.0 9 6803.0 10 6861.0 11 6786.5 12 6712.0 13 6725.0 14 6738.0 15 6281.5 16 5825.0 17 5903.0 18 5981.0 19 6182.5 20 6384.0 21 6852.0 22 7320.0 23 7708.5 24 8097.0 25 10370.5 26 14178.0 27 15712.0 28 19881.0 29 24050.0 30 29365.5 31 34681.0 32 38268.0 33 41855.0 34 49958.0 35 58061.0 36 59244.5 37 60428.0 38 62760.0 39 65092.0 40 73513.0 41 81934.0 42 82092.5 43 82251.0 44 86366.5 45 90482.0 46 91080.5 47 91679.0 48 93345.0 49 95011.0 50 94447.5 51 93884.0 52 86571.5 53 79259.0 54 76798.5 55 74338.0 56 73065.0 57 71792.0 58 68506.5 59 65221.0 60 57911.0 61 50601.0 62 48034.0 63 45467.0 64 40469.0 65 35471.0 66 30183.5 67 24896.0 68 21125.0 69 17354.0 70 14924.5 71 12495.0 72 10115.0 73 7735.0 74 6071.0 75 3368.5 76 2330.0 77 1956.0 78 1582.0 79 1304.0 80 1026.0 81 628.5 82 231.0 83 150.0 84 69.0 85 54.0 86 39.0 87 64.5 88 90.0 89 60.0 90 30.0 91 17.0 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 5.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1431063.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.338251983053308 #Duplication Level Percentage of deduplicated Percentage of total 1 82.0077716980309 15.858869536652287 2 6.40554747414048 2.4774418228867847 3 1.9277204954323206 1.1183623408069971 4 0.9704324748107045 0.7506587092170974 5 0.6472297676278818 0.6258146168660508 6 0.4793061779064644 0.5561366187233632 7 0.3695903155083524 0.5003061456257685 8 0.2882251757835751 0.4459016861730088 9 0.25867646766247 0.4502115642368687 >10 3.349753365365956 16.684780800330536 >50 2.1822449284829637 30.965410415627815 >100 1.1087710966433004 28.146816134716317 >500 0.0036388943112678047 0.54754784277428 >1k 7.277788622535609E-4 0.22215763264855443 >5k 3.6388943112678043E-4 0.6495841327142242 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9231 0.6450449770555174 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2137 0.149329554324303 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.037105284673001816 0.0 2 0.0 0.0 0.0 0.12067952284420742 0.0 3 0.0 0.0 0.0 0.16994360136485956 0.0 4 0.0 0.0 0.0 0.255474427051779 0.0 5 0.0 0.0 0.0 0.42982035032699467 0.0 6 0.0 0.0 0.0 0.5674103795570146 0.0 7 0.0 0.0 0.0 0.6549676708852091 0.0 8 0.0 0.0 0.0 0.8182728503217538 0.0 9 0.0 0.0 0.0 0.876271694537557 0.0 10 0.0 0.0 0.0 0.9941560923593161 0.0 11 0.0 0.0 0.0 1.2105686472223796 0.0 12 0.0 0.0 0.0 1.3767388298069336 0.0 13 0.0 0.0 0.0 1.4512987897807434 0.0 14 0.0 0.0 0.0 1.4872161463192046 0.0 15 0.0 0.0 0.0 1.5486390186875072 0.0 16 0.0 0.0 0.0 1.669458297782837 0.0 17 0.0 0.0 0.0 1.8178794364748443 0.0 18 0.0 0.0 0.0 1.9662306970412904 0.0 19 0.0 0.0 0.0 2.0714671541364704 0.0 20 1.397562511224174E-4 0.0 0.0 2.181804714397619 0.0 21 1.397562511224174E-4 0.0 0.0 2.3281993874483513 0.0 22 2.096343766836261E-4 0.0 0.0 2.4815818730552044 0.0 23 2.096343766836261E-4 0.0 0.0 2.6359426524199145 0.0 24 2.096343766836261E-4 0.0 0.0 2.7535475377394287 0.0 25 2.096343766836261E-4 0.0 0.0 2.8589237510857313 0.0 26 2.096343766836261E-4 0.0 0.0 2.96059642377729 0.0 27 2.096343766836261E-4 0.0 0.0 3.084839731025119 0.0 28 2.096343766836261E-4 0.0 0.0 3.2027940069724394 0.0 29 2.096343766836261E-4 0.0 0.0 3.3317890267584307 0.0 30 2.096343766836261E-4 0.0 0.0 3.4834944373518146 0.0 31 2.096343766836261E-4 0.0 0.0 3.6065498164651033 0.0 32 2.096343766836261E-4 0.0 0.0 3.723665554905689 0.0 33 2.096343766836261E-4 0.0 0.0 3.8447643465032635 0.0 34 2.096343766836261E-4 0.0 0.0 3.975087050674918 0.0 35 2.096343766836261E-4 0.0 0.0 4.120503429967793 0.0 36 2.096343766836261E-4 0.0 0.0 4.242650393448786 0.0 37 2.795125022448348E-4 0.0 0.0 4.379751275799878 0.0 38 2.795125022448348E-4 0.0 0.0 4.528591683245252 0.0 39 2.795125022448348E-4 0.0 0.0 4.794058682252284 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 20 7.0338673E-4 45.0 12 CGTTAGA 20 7.0338673E-4 45.0 10 CGAATTT 20 7.0338673E-4 45.0 31 TAGATCG 35 1.2122109E-7 45.0 1 AATCGTC 35 1.2122109E-7 45.0 44 TACGTCG 20 7.0338673E-4 45.0 1 CGGCATA 25 3.8912884E-5 44.999996 21 TACGGAT 25 3.8912884E-5 44.999996 13 TCTAGCG 30 2.165878E-6 44.999996 1 ATCGGTA 25 3.8912884E-5 44.999996 27 CGGTATG 30 2.165878E-6 44.999996 20 CGGTCTA 140 0.0 43.392857 31 TCGATAG 75 0.0 42.000004 1 ACACGCG 350 0.0 41.785713 36 ACGGGAT 585 0.0 41.153843 5 AATTATC 2215 0.0 41.038376 45 TACGGGA 360 0.0 40.625 4 CGTTTTT 4785 0.0 40.34483 1 TAACGGG 240 0.0 40.312496 3 TTACACG 375 0.0 40.2 34 >>END_MODULE