##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547741_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1017054 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50133621223652 31.0 31.0 33.0 30.0 34.0 2 31.902924525148123 31.0 31.0 34.0 30.0 34.0 3 32.03597842395782 33.0 31.0 34.0 30.0 34.0 4 35.71007340809829 37.0 35.0 37.0 33.0 37.0 5 35.58627270528409 37.0 35.0 37.0 33.0 37.0 6 35.639500950785305 37.0 35.0 37.0 33.0 37.0 7 36.061126547852915 37.0 35.0 37.0 35.0 37.0 8 36.093608598953445 37.0 35.0 37.0 35.0 37.0 9 37.9085004336053 39.0 38.0 39.0 35.0 39.0 10 37.260189724439414 39.0 37.0 39.0 34.0 39.0 11 36.88330609780798 39.0 37.0 39.0 33.0 39.0 12 36.320576881856816 38.0 35.0 39.0 32.0 39.0 13 36.04340084203985 38.0 35.0 39.0 31.0 39.0 14 36.93901110462178 39.0 35.0 41.0 31.0 41.0 15 37.22822485335095 39.0 35.0 41.0 32.0 41.0 16 37.36888601785156 39.0 35.0 41.0 32.0 41.0 17 37.3267623941305 39.0 35.0 41.0 32.0 41.0 18 37.22044650529864 39.0 35.0 41.0 32.0 41.0 19 37.18753773152655 39.0 35.0 41.0 32.0 41.0 20 37.046123411342954 39.0 35.0 41.0 32.0 41.0 21 36.95486473677897 39.0 35.0 41.0 32.0 41.0 22 36.94486920065208 39.0 35.0 41.0 32.0 41.0 23 36.887551693420406 38.0 35.0 41.0 32.0 41.0 24 36.787381004351786 38.0 35.0 41.0 31.0 41.0 25 36.698845882322864 38.0 35.0 41.0 31.0 41.0 26 36.57593598766634 38.0 35.0 41.0 31.0 41.0 27 36.54778212366305 38.0 35.0 41.0 31.0 41.0 28 36.599181557714736 38.0 35.0 41.0 31.0 41.0 29 36.59632920179263 38.0 35.0 41.0 31.0 41.0 30 36.59692897328952 38.0 35.0 41.0 31.0 41.0 31 36.43944569314904 38.0 35.0 41.0 30.0 41.0 32 36.27528135182596 38.0 35.0 41.0 30.0 41.0 33 36.19641533291251 38.0 35.0 41.0 30.0 41.0 34 36.04416088034657 38.0 35.0 41.0 30.0 41.0 35 35.97656269971899 38.0 35.0 41.0 30.0 41.0 36 35.827021967368495 38.0 35.0 41.0 29.0 41.0 37 35.59025676119459 38.0 34.0 40.0 28.0 41.0 38 35.68594292928399 38.0 35.0 41.0 29.0 41.0 39 35.58953310247047 38.0 35.0 40.0 28.0 41.0 40 35.466992903031695 38.0 34.0 40.0 27.0 41.0 41 35.397353532850765 38.0 34.0 40.0 27.0 41.0 42 35.427812092573255 38.0 34.0 40.0 27.0 41.0 43 35.38104663075904 38.0 34.0 40.0 27.0 41.0 44 35.26497118147119 38.0 34.0 40.0 27.0 41.0 45 35.24380514702268 38.0 34.0 40.0 27.0 41.0 46 35.084010288539254 37.0 34.0 40.0 26.0 41.0 47 35.12325304261131 37.0 34.0 40.0 27.0 41.0 48 34.96069431908237 37.0 34.0 40.0 26.0 41.0 49 34.93746939690518 37.0 34.0 40.0 26.0 41.0 50 34.809635476582365 37.0 34.0 40.0 26.0 41.0 51 34.138349586157666 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 2.0 13 4.0 14 9.0 15 26.0 16 96.0 17 195.0 18 466.0 19 805.0 20 1434.0 21 2303.0 22 3486.0 23 4874.0 24 7262.0 25 10001.0 26 13515.0 27 16307.0 28 18116.0 29 20474.0 30 23910.0 31 29489.0 32 36606.0 33 47907.0 34 81782.0 35 114415.0 36 69419.0 37 89908.0 38 140776.0 39 283313.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.5563303423417 23.621361304316192 28.49504549414289 14.327262859199216 2 29.41535061068537 25.21341049737772 31.816403062177624 13.554835829759284 3 29.373563252295355 24.947741221213427 32.50899165629357 13.16970387019765 4 25.91160351367774 27.66411616295693 31.738137797993026 14.6861425253723 5 23.291781950614222 31.99004182668767 30.18001010762457 14.538166115073537 6 22.49949363553951 40.99605330690406 25.792140830280395 10.712312227276035 7 89.25691261230966 3.4525207117812817 6.025540433447978 1.265026242461069 8 89.9135149166121 2.6853048117405764 5.84629724675386 1.5548830248934669 9 85.92739421898935 4.9944250747747905 6.9602990598335985 2.117881646402256 10 46.336871001933034 33.97046764478582 11.452980864339553 8.239680488941591 11 33.550037657784145 23.033388590969604 27.12756648122912 16.289007270017127 12 33.669008725200435 22.218092647981326 27.077028358376253 17.03587026844199 13 25.4081887490733 29.41957850812248 27.402084845052478 17.77014789775174 14 17.157496062155992 32.54773099560102 30.47271826274711 19.822054679495878 15 17.00686492555951 27.767650488567963 38.68811292222439 16.537371663648145 16 23.300434391880863 25.828323766486346 34.90542291756387 15.965818924068929 17 23.223054036462173 25.025121576632113 27.43168012711223 24.320144259793484 18 24.649625290299237 26.172946569208715 30.941326615892567 18.23610152459948 19 26.316990051659005 27.887998080731208 26.77881410426585 19.016197763343932 20 26.43704267423362 29.27759981279263 27.579263244626144 16.7060942683476 21 24.62484784485386 25.777883966829684 31.26520322421425 18.3320649641022 22 24.22467243627182 22.66792127065033 31.522711675092964 21.584694617984887 23 20.85002369589029 27.423519301826648 31.01959188007716 20.7068651222059 24 20.228522772635475 27.077028358376253 34.12984954584516 18.564599323143117 25 21.207920130101254 28.34461100393883 30.47114509160772 19.9763237743522 26 20.040725467870928 31.67776735551898 26.685013775079792 21.596493401530303 27 18.523401903930374 31.219876230760608 31.259893771618813 18.99682809369021 28 17.160445758042346 28.158878486294732 34.195037824933586 20.485637930729343 29 18.7293889999941 27.17033707158125 33.95581748855027 20.144456439874382 30 20.885813339311383 27.86843176468506 32.28442147614581 18.961333419857745 31 25.667860310268676 26.64155492235417 28.16054998063033 19.530034786746818 32 26.1603612000936 27.093251685751202 28.516479950917063 18.22990716323814 33 24.51364430993831 26.713724148373636 28.150029398635667 20.622602143052386 34 19.39631523989877 27.685648942927315 30.209605389684324 22.708430427489592 35 20.18103266886517 28.29485946665565 29.90637665256712 21.61773121191205 36 26.798282097115788 26.815881949237703 27.70865657084088 18.677179382805633 37 20.589958841910068 31.324983727511025 28.828066159712268 19.256991270866642 38 21.596001785549245 29.959274532129072 26.787269899140064 21.65745378318162 39 20.197944258613603 28.77801965284046 29.11300678233407 21.911029306211862 40 24.18691632892649 26.96808625697357 27.682600923844753 21.16239649025519 41 19.65765829542974 25.587038642982574 29.466478672715507 25.28882438887217 42 20.773233279648867 26.949306526497118 28.371551559700865 23.905908634153153 43 21.134472702531035 27.5730688832648 28.444704017682444 22.84775439652172 44 20.687397129355965 28.443819108916536 28.096541579896446 22.772242181831054 45 19.393857159993473 31.054988230713416 26.14226973199063 23.408884877302484 46 21.695898152900437 29.60826072165293 27.597256389532905 21.09858473591373 47 20.448865055346126 28.52306760506325 29.50738112233962 21.520686217251 48 21.70012605033754 28.047969920967812 29.59892001801281 20.652984010681834 49 23.101526565944386 25.538958600035006 30.115903383694477 21.24361145032614 50 20.024502140495983 28.747441138818587 29.513280514112328 21.714776206573102 51 19.64556454229569 29.71228666324502 27.603647397286675 23.038501397172617 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 645.0 1 1337.5 2 2030.0 3 6396.5 4 10763.0 5 7354.0 6 3945.0 7 3941.5 8 3938.0 9 4202.0 10 4466.0 11 4430.0 12 4394.0 13 4236.0 14 4078.0 15 4026.0 16 3974.0 17 3977.0 18 3980.0 19 3815.0 20 3650.0 21 4187.0 22 4724.0 23 4909.0 24 5094.0 25 6756.0 26 10223.5 27 12029.0 28 13419.5 29 14810.0 30 17083.0 31 19356.0 32 23058.0 33 26760.0 34 31542.5 35 36325.0 36 38574.0 37 40823.0 38 43247.5 39 45672.0 40 54536.0 41 63400.0 42 71502.0 43 79604.0 44 81239.0 45 82874.0 46 81384.5 47 79895.0 48 79933.5 49 79972.0 50 74972.5 51 69973.0 52 68546.5 53 67120.0 54 62150.0 55 57180.0 56 54037.0 57 50894.0 58 46700.5 59 42507.0 60 34881.0 61 27255.0 62 24261.5 63 21268.0 64 17771.5 65 14275.0 66 11590.5 67 8906.0 68 7001.5 69 5097.0 70 3924.5 71 2752.0 72 2455.0 73 2158.0 74 1667.0 75 842.5 76 509.0 77 364.5 78 220.0 79 151.0 80 82.0 81 66.5 82 51.0 83 28.0 84 5.0 85 3.0 86 1.0 87 2.0 88 3.0 89 1.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1017054.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.44111105614978 #Duplication Level Percentage of deduplicated Percentage of total 1 81.89126154287952 15.920571101833284 2 7.027745873932502 2.7325437601904032 3 2.2068010137148613 1.2870799075936357 4 1.0533160726830466 0.8191053898503455 5 0.6382326732835234 0.6203976140484168 6 0.4692080711221586 0.5473155731476625 7 0.3779808187095108 0.5143856951538209 8 0.3101846289460818 0.482426705540111 9 0.2474139564164573 0.4329001983180373 >10 2.8078187386841047 13.303628890394027 >50 1.493910629992669 21.514256026467997 >100 1.4735853152988692 40.77232318139482 >500 0.0010162657346888752 0.12456999724212348 >1k 0.0010162657346888752 0.22286273892008768 >5k 5.081328673444376E-4 0.7056332199052243 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7143 0.7023225905409153 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1173 0.11533310915644596 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1083 0.1064840214973836 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.83231962118039E-5 0.0 0.0 0.04621190221954783 0.0 2 9.83231962118039E-5 0.0 0.0 0.15603891238813278 0.0 3 9.83231962118039E-5 0.0 0.0 0.2169009708432394 0.0 4 9.83231962118039E-5 0.0 0.0 0.3275145665815188 0.0 5 9.83231962118039E-5 0.0 0.0 0.580598473630702 0.0 6 9.83231962118039E-5 0.0 0.0 0.7778348052315807 0.0 7 9.83231962118039E-5 0.0 0.0 0.9172570974599186 0.0 8 9.83231962118039E-5 0.0 0.0 1.2066222639112574 0.0 9 9.83231962118039E-5 0.0 0.0 1.2972762508185407 0.0 10 9.83231962118039E-5 0.0 0.0 1.4762244679240237 0.0 11 9.83231962118039E-5 0.0 0.0 1.7900721102321018 0.0 12 9.83231962118039E-5 0.0 0.0 2.0293907698116325 0.0 13 9.83231962118039E-5 0.0 0.0 2.1135554257689364 0.0 14 9.83231962118039E-5 0.0 0.0 2.1562276929248596 0.0 15 9.83231962118039E-5 0.0 0.0 2.2217109416019207 0.0 16 9.83231962118039E-5 0.0 0.0 2.3530707317408908 0.0 17 9.83231962118039E-5 0.0 0.0 2.5208101044782283 0.0 18 9.83231962118039E-5 0.0 0.0 2.6898276787663193 0.0 19 1.966463924236078E-4 0.0 0.0 2.81469813795531 0.0 20 2.949695886354117E-4 0.0 0.0 2.950482471923811 0.0 21 2.949695886354117E-4 0.0 0.0 3.1207782477626558 0.0 22 2.949695886354117E-4 0.0 0.0 3.3152615298696038 0.0 23 2.949695886354117E-4 0.0 0.0 3.4893919103607085 0.0 24 2.949695886354117E-4 0.0 0.0 3.626552769076175 0.0 25 2.949695886354117E-4 0.0 0.0 3.7497517339295654 0.0 26 2.949695886354117E-4 0.0 0.0 3.875802071473098 0.0 27 2.949695886354117E-4 0.0 0.0 4.045212938546036 0.0 28 2.949695886354117E-4 0.0 0.0 4.180702302925901 0.0 29 2.949695886354117E-4 0.0 0.0 4.359847166423808 0.0 30 2.949695886354117E-4 0.0 0.0 4.555805296473934 0.0 31 2.949695886354117E-4 0.0 0.0 4.715482167121903 0.0 32 2.949695886354117E-4 0.0 0.0 4.856674276882053 0.0 33 2.949695886354117E-4 0.0 0.0 5.006617151105054 0.0 34 2.949695886354117E-4 0.0 0.0 5.184877105837055 0.0 35 2.949695886354117E-4 0.0 0.0 5.371592855443271 0.0 36 2.949695886354117E-4 0.0 0.0 5.531957988464723 0.0 37 2.949695886354117E-4 0.0 0.0 5.698320836455095 0.0 38 2.949695886354117E-4 0.0 0.0 5.923087662995279 0.0 39 2.949695886354117E-4 0.0 0.0 6.375177719177153 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 45 3.8380676E-10 45.000004 4 CTAACGG 25 3.8904873E-5 45.000004 2 CTTATCG 25 3.8904873E-5 45.000004 25 AGGCACG 45 3.8380676E-10 45.000004 10 ACGTGCG 25 3.8904873E-5 45.000004 1 CAGTCGA 25 3.8904873E-5 45.000004 14 CGCGTTC 25 3.8904873E-5 45.000004 25 GCGTCGC 25 3.8904873E-5 45.000004 21 TGTCGTT 25 3.8904873E-5 45.000004 38 TATCGAA 25 3.8904873E-5 45.000004 27 CGATACT 25 3.8904873E-5 45.000004 10 TCGGTCT 25 3.8904873E-5 45.000004 42 ATCGACG 25 3.8904873E-5 45.000004 1 TGCAACG 25 3.8904873E-5 45.000004 1 GCATACG 25 3.8904873E-5 45.000004 24 CGAACAC 20 7.032903E-4 45.0 33 CGAGTAG 20 7.032903E-4 45.0 45 CAACGAA 20 7.032903E-4 45.0 14 CGACGGA 20 7.032903E-4 45.0 29 CGTGCGG 85 0.0 45.0 2 >>END_MODULE