SRR1547738_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547738_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	365493
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1858	0.5083544691690401	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	20	7.026966E-4	45.0	25
TTTAGCG	20	7.026966E-4	45.0	1
CTAGACG	20	7.026966E-4	45.0	1
CACGCGT	20	7.026966E-4	45.0	26
CGATTGA	20	7.026966E-4	45.0	10
TACGCGG	25	3.8855673E-5	45.0	2
AGACCGG	20	7.026966E-4	45.0	2
CGTAAGG	35	1.2088822E-7	45.0	2
CGCGTGG	20	7.026966E-4	45.0	28
TATAACG	20	7.026966E-4	45.0	1
CGATAGT	20	7.026966E-4	45.0	10
GCGTAAG	20	7.026966E-4	45.0	1
GCGATCA	30	2.161425E-6	44.999996	9
TATACGG	30	2.161425E-6	44.999996	2
GGCACCG	120	0.0	43.124996	8
CGAGGGC	80	0.0	42.1875	4
AGTACGG	60	3.6379788E-12	41.249996	2
CGTTTTT	995	0.0	40.92965	1
TCGTCCC	55	6.002665E-11	40.909092	38
TAGTGCG	55	6.002665E-11	40.909092	1