##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547738_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 365493 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53382964926825 31.0 31.0 33.0 30.0 34.0 2 31.952981315647634 31.0 31.0 34.0 30.0 34.0 3 32.09189505681368 33.0 31.0 34.0 30.0 34.0 4 35.76151937246404 37.0 35.0 37.0 35.0 37.0 5 35.64756643766091 37.0 35.0 37.0 33.0 37.0 6 35.707329552139164 37.0 35.0 37.0 33.0 37.0 7 36.121567307718614 37.0 35.0 37.0 35.0 37.0 8 36.15424372012597 37.0 35.0 37.0 35.0 37.0 9 37.97604331683507 39.0 38.0 39.0 35.0 39.0 10 37.26943334072062 39.0 37.0 39.0 34.0 39.0 11 36.96248628564706 39.0 37.0 39.0 33.0 39.0 12 36.686264853225644 39.0 35.0 39.0 33.0 39.0 13 36.61514721212171 39.0 35.0 39.0 32.0 39.0 14 37.67647807208346 40.0 36.0 41.0 33.0 41.0 15 37.82369840188458 40.0 36.0 41.0 33.0 41.0 16 37.858339284199694 40.0 36.0 41.0 33.0 41.0 17 37.80049959917153 40.0 36.0 41.0 33.0 41.0 18 37.70470843490847 39.0 36.0 41.0 33.0 41.0 19 37.70633363703272 39.0 36.0 41.0 33.0 41.0 20 37.62208304947017 39.0 35.0 41.0 33.0 41.0 21 37.517531115507 39.0 35.0 41.0 32.0 41.0 22 37.48625007866088 39.0 35.0 41.0 32.0 41.0 23 37.40033324851639 39.0 35.0 41.0 32.0 41.0 24 37.36312049751979 39.0 35.0 41.0 32.0 41.0 25 37.25310744665425 39.0 35.0 41.0 32.0 41.0 26 37.13589042745005 39.0 35.0 41.0 32.0 41.0 27 37.12035798223222 39.0 35.0 41.0 31.0 41.0 28 37.156550193847764 39.0 35.0 41.0 32.0 41.0 29 37.150429693591946 39.0 35.0 41.0 32.0 41.0 30 37.188528918474496 39.0 35.0 41.0 32.0 41.0 31 37.086513284796155 39.0 35.0 41.0 31.0 41.0 32 36.9656546089802 39.0 35.0 41.0 31.0 41.0 33 36.90084899026794 39.0 35.0 41.0 31.0 41.0 34 36.765626154262876 39.0 35.0 41.0 31.0 41.0 35 36.69068354250287 39.0 35.0 41.0 30.0 41.0 36 36.61093919719393 39.0 35.0 41.0 30.0 41.0 37 36.401846273389644 39.0 35.0 41.0 30.0 41.0 38 36.51581562437584 39.0 35.0 41.0 30.0 41.0 39 36.41595598274112 39.0 35.0 41.0 30.0 41.0 40 36.316698267819085 39.0 35.0 41.0 30.0 41.0 41 36.27864008339421 39.0 35.0 41.0 30.0 41.0 42 36.272462126497636 39.0 35.0 41.0 30.0 41.0 43 36.2375722654059 39.0 35.0 41.0 30.0 41.0 44 36.11054931284594 39.0 35.0 41.0 29.0 41.0 45 36.08747363150594 39.0 35.0 41.0 29.0 41.0 46 35.90575195694582 38.0 35.0 40.0 29.0 41.0 47 35.94534505448805 38.0 35.0 40.0 29.0 41.0 48 35.79510961906247 38.0 35.0 40.0 28.0 41.0 49 35.76175467108809 38.0 35.0 40.0 28.0 41.0 50 35.66427811202951 38.0 34.0 40.0 28.0 41.0 51 34.990801465417945 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 9.0 16 16.0 17 39.0 18 105.0 19 189.0 20 322.0 21 530.0 22 852.0 23 1222.0 24 1892.0 25 2673.0 26 3793.0 27 4624.0 28 5382.0 29 6239.0 30 7385.0 31 9130.0 32 11807.0 33 15229.0 34 23717.0 35 31806.0 36 26687.0 37 35634.0 38 56696.0 39 119431.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.52675153833315 23.713176449343763 30.44162268497618 13.3184493273469 2 29.53380776102415 25.292686864043905 31.58692505738824 13.586580317543701 3 28.86731072824924 24.747669586011224 33.147009655451676 13.238010030287858 4 25.38324947399813 28.048143192892887 31.982281466402913 14.586325866706066 5 23.581846984757572 32.394874867644525 30.02191560440282 14.00136254319508 6 21.658143931621126 41.68369845660519 25.98627059888972 10.671887012883968 7 91.66523025064775 2.4038764080297024 4.7872325872178125 1.1436607541047297 8 92.76456731045465 1.7278032684620497 4.55248116927 0.9551482518133042 9 88.50374699378646 4.844962831025492 5.222261438659563 1.4290287365284697 10 38.80512075470666 42.49876194619323 11.230858046528935 7.465259252571185 11 26.557827372890863 24.665315067593635 30.60386929435037 18.17298826516513 12 27.19176564257045 23.65489899943364 30.044351054602963 19.10898430339295 13 24.145469270273303 25.996667514836126 30.242439663687133 19.615423551203442 14 18.5270306134454 29.73463240062053 31.252582128795904 20.485754857138165 15 19.198999707244734 29.53161893661438 33.84168780250237 17.42769355363851 16 24.359974062430744 28.499861830459132 30.312482044799765 16.82768206231036 17 23.504690924313188 27.541703945082396 28.17372699340343 20.779878137200985 18 23.07704935525441 27.995611407058412 29.97211984908056 18.955219388606622 19 24.464490427997255 28.496031387742036 27.978100811780255 19.061377372480457 20 25.970948828021328 30.068975329212872 27.80053243153768 16.15954341122812 21 26.280120275901314 25.804598172878823 30.634239233035927 17.281042318183932 22 24.866413310241235 23.03901853113466 31.726189010459844 20.36837914816426 23 20.8638742739259 27.184378360187473 31.55518710344658 20.396560262440047 24 20.588082398294905 27.875773270623515 32.30184983022931 19.234294500852272 25 21.4515736279491 29.717942614496035 29.18195423715365 19.648529520401212 26 20.63103807733664 31.631795957788523 26.96494871310805 20.772217251766794 27 19.63484936784015 30.977063856216127 30.952713184657437 18.43537359128629 28 18.38174739324693 29.421083303921 32.37079779913706 19.826371503695007 29 19.705986161157668 28.330227938701974 31.899106138831662 20.0646797613087 30 21.58290309253529 27.62132243298777 31.16284032799534 19.632934146481603 31 23.151742988237807 27.997526628416956 29.453368463965113 19.397361919380124 32 24.03985849250191 27.81065574443286 28.82107181259285 19.328413950472374 33 23.082521416278833 27.305037305776036 29.106987001119037 20.505454276826097 34 20.444714399454984 28.091646078037062 30.501815356244855 20.961824166263103 35 20.821465800986612 28.432555479858713 29.90809673509479 20.837881984059887 36 23.556401900994 28.59124524956702 28.241033344003853 19.611319505435123 37 20.971673876107065 29.726150706032673 29.34228562516929 19.95988979269097 38 21.195754775057253 29.944759543958433 28.022150903026873 20.837334777957444 39 20.909565983479848 28.859376239763822 28.76416237793884 21.46689539881749 40 22.056783577250453 28.241580550106292 28.353484198055778 21.348151674587477 41 19.952502510307994 27.227607642280425 29.452821257862666 23.36706858954891 42 20.846363678647744 27.833364797684222 28.93844752156676 22.381824002101272 43 21.1035505467957 27.953750140221562 28.627634455379447 22.315064857603293 44 20.74294172528612 28.321746244114117 29.157603565594965 21.777708465004803 45 20.989731677487665 29.318755762764265 27.751283882317857 21.94022867743021 46 21.286864591113922 29.30808524376664 28.255807908769796 21.149242256349645 47 20.63404771090007 28.0599081240954 29.97102543687567 21.33501872812886 48 21.47893393307122 27.599434188890076 29.863499437745727 21.058132440292972 49 21.697816374048205 27.44676368630863 29.54393107391934 21.31148886572383 50 20.331989942351836 28.72640515687031 29.40877116661605 21.5328337341618 51 20.103804997633333 28.914917659161738 28.46566144905648 22.515615894148453 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 210.0 1 343.0 2 476.0 3 1746.0 4 3016.0 5 2090.0 6 1164.0 7 1223.0 8 1282.0 9 1262.0 10 1242.0 11 1282.0 12 1322.0 13 1332.5 14 1343.0 15 1299.0 16 1255.0 17 1283.5 18 1312.0 19 1297.5 20 1283.0 21 1490.5 22 1698.0 23 1825.5 24 1953.0 25 2682.0 26 3922.0 27 4433.0 28 5529.5 29 6626.0 30 7703.0 31 8780.0 32 10415.5 33 12051.0 34 12907.5 35 13764.0 36 15593.5 37 17423.0 38 18759.5 39 20096.0 40 21474.0 41 22852.0 42 24870.5 43 26889.0 44 27566.0 45 28243.0 46 28915.5 47 29588.0 48 29201.0 49 28814.0 50 28333.5 51 27853.0 52 25848.0 53 23843.0 54 21664.0 55 19485.0 56 17542.0 57 15599.0 58 13887.0 59 12175.0 60 10997.0 61 9819.0 62 8150.5 63 6482.0 64 5300.5 65 4119.0 66 3358.0 67 2597.0 68 1971.0 69 1345.0 70 1007.0 71 669.0 72 552.5 73 436.0 74 364.0 75 236.0 76 180.0 77 103.0 78 26.0 79 23.5 80 21.0 81 20.5 82 20.0 83 12.0 84 4.0 85 2.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 365493.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.226447666521132 #Duplication Level Percentage of deduplicated Percentage of total 1 67.24429435915164 18.98067555600736 2 7.1610284334811025 4.042607886322483 3 3.626930885653091 3.0712612450192833 4 2.6481324797338597 2.9898949141289046 5 2.110094329308025 2.9780233578817987 6 1.828409185259562 3.0965697708429345 7 1.5897387541184966 3.141087442259638 8 1.394016123688135 3.1478498529255834 9 1.2512192181978263 3.1785726403625785 >10 11.1081902381554 54.01882224779009 >50 0.028958784324552976 0.5459692389662348 >100 0.007988630158497372 0.28496381032259344 >500 0.0 0.0 >1k 9.985787698121714E-4 0.523702037170503 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1858 0.5083544691690401 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03693641191486567 0.0 2 0.0 0.0 0.0 0.13379189204718012 0.0 3 0.0 0.0 0.0 0.19261654805974396 0.0 4 0.0 0.0 0.0 0.2744238603748909 0.0 5 0.0 0.0 0.0 0.46649320233219244 0.0 6 0.0 0.0 0.0 0.6506280558040783 0.0 7 0.0 0.0 0.0 0.7559652305242508 0.0 8 0.0 0.0 0.0 0.9504969999425433 0.0 9 0.0 0.0 0.0 1.0180769535941865 0.0 10 0.0 0.0 0.0 1.1852484178903564 0.0 11 0.0 0.0 0.0 1.4670595606482204 0.0 12 0.0 0.0 0.0 1.709745467081449 0.0 13 0.0 0.0 0.0 1.810978596033303 0.0 14 0.0 0.0 0.0 1.868708839840982 0.0 15 0.0 0.0 0.0 1.9434024728243768 0.0 16 0.0 0.0 0.0 2.079383189281327 0.0 17 0.0 0.0 0.0 2.278019004467938 0.0 18 0.0 0.0 0.0 2.4777492318594336 0.0 19 0.0 0.0 0.0 2.6170131849310385 0.0 20 0.0 0.0 0.0 2.776523763793014 0.0 21 0.0 0.0 0.0 2.941506403679414 0.0 22 0.0 0.0 0.0 3.1579264171954047 0.0 23 0.0 0.0 0.0 3.372978415455289 0.0 24 0.0 0.0 0.0 3.5272905363440614 0.0 25 0.0 0.0 0.0 3.688442733513364 0.0 26 0.0 0.0 0.0 3.826612274380084 0.0 27 0.0 0.0 0.0 3.9858492501908382 0.0 28 0.0 0.0 0.0 4.143991813796707 0.0 29 0.0 0.0 0.0 4.325937842858823 0.0 30 0.0 0.0 0.0 4.531140131274744 0.0 31 0.0 0.0 0.0 4.7002268169294625 0.0 32 0.0 0.0 0.0 4.869860708686623 0.0 33 0.0 0.0 0.0 5.035937760777908 0.0 34 0.0 0.0 0.0 5.223355850864449 0.0 35 0.0 0.0 0.0 5.428558139280369 0.0 36 0.0 0.0 0.0 5.611324977496149 0.0 37 0.0 0.0 0.0 5.825829769653591 0.0 38 0.0 0.0 0.0 6.05292030216721 0.0 39 0.0 0.0 0.0 6.430492512852504 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.026966E-4 45.0 25 TTTAGCG 20 7.026966E-4 45.0 1 CTAGACG 20 7.026966E-4 45.0 1 CACGCGT 20 7.026966E-4 45.0 26 CGATTGA 20 7.026966E-4 45.0 10 TACGCGG 25 3.8855673E-5 45.0 2 AGACCGG 20 7.026966E-4 45.0 2 CGTAAGG 35 1.2088822E-7 45.0 2 CGCGTGG 20 7.026966E-4 45.0 28 TATAACG 20 7.026966E-4 45.0 1 CGATAGT 20 7.026966E-4 45.0 10 GCGTAAG 20 7.026966E-4 45.0 1 GCGATCA 30 2.161425E-6 44.999996 9 TATACGG 30 2.161425E-6 44.999996 2 GGCACCG 120 0.0 43.124996 8 CGAGGGC 80 0.0 42.1875 4 AGTACGG 60 3.6379788E-12 41.249996 2 CGTTTTT 995 0.0 40.92965 1 TCGTCCC 55 6.002665E-11 40.909092 38 TAGTGCG 55 6.002665E-11 40.909092 1 >>END_MODULE