##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547737_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2134932 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.474020249825287 31.0 31.0 33.0 30.0 34.0 2 31.870166356586534 31.0 31.0 34.0 30.0 34.0 3 32.00089557887558 33.0 31.0 34.0 30.0 34.0 4 35.68081465826546 37.0 35.0 37.0 33.0 37.0 5 35.55005452164284 37.0 35.0 37.0 33.0 37.0 6 35.61345747780257 37.0 35.0 37.0 33.0 37.0 7 36.08705616853371 37.0 35.0 37.0 35.0 37.0 8 36.12818066336539 37.0 35.0 37.0 35.0 37.0 9 37.91916182810506 39.0 38.0 39.0 35.0 39.0 10 37.181041831777314 39.0 37.0 39.0 33.0 39.0 11 36.83111405890211 39.0 37.0 39.0 32.0 39.0 12 36.50497954969995 39.0 35.0 39.0 32.0 39.0 13 36.369122295230014 39.0 35.0 39.0 32.0 39.0 14 37.41398414563087 40.0 36.0 41.0 32.0 41.0 15 37.602242600701096 40.0 36.0 41.0 32.0 41.0 16 37.682988497994316 40.0 36.0 41.0 33.0 41.0 17 37.61132017319521 39.0 35.0 41.0 33.0 41.0 18 37.52782149501717 39.0 36.0 41.0 32.0 41.0 19 37.50665454450071 39.0 36.0 41.0 32.0 41.0 20 37.387576278776095 39.0 35.0 41.0 32.0 41.0 21 37.30828710235267 39.0 35.0 41.0 32.0 41.0 22 37.23647544746156 39.0 35.0 41.0 32.0 41.0 23 37.152983326869425 39.0 35.0 41.0 32.0 41.0 24 37.09227132292738 39.0 35.0 41.0 32.0 41.0 25 37.004007621788425 39.0 35.0 41.0 32.0 41.0 26 36.88664603837499 39.0 35.0 41.0 31.0 41.0 27 36.840074063248856 39.0 35.0 41.0 31.0 41.0 28 36.89968720315214 39.0 35.0 41.0 31.0 41.0 29 36.869795384583675 39.0 35.0 41.0 31.0 41.0 30 36.88675517534048 39.0 35.0 41.0 31.0 41.0 31 36.772324832828396 39.0 35.0 41.0 31.0 41.0 32 36.61041709993574 39.0 35.0 41.0 30.0 41.0 33 36.53555335720294 39.0 35.0 41.0 30.0 41.0 34 36.40818958168223 39.0 35.0 41.0 30.0 41.0 35 36.34859424094069 39.0 35.0 41.0 30.0 41.0 36 36.23775932910275 39.0 35.0 41.0 30.0 41.0 37 36.00276308566268 38.0 35.0 41.0 29.0 41.0 38 36.11234971418293 38.0 35.0 41.0 30.0 41.0 39 36.03391770791763 38.0 35.0 41.0 30.0 41.0 40 35.94268997794777 38.0 35.0 41.0 29.0 41.0 41 35.901351893175054 38.0 35.0 41.0 29.0 41.0 42 35.89687259360017 38.0 35.0 40.0 29.0 41.0 43 35.84577963138873 38.0 35.0 40.0 29.0 41.0 44 35.709411353616886 38.0 35.0 40.0 28.0 41.0 45 35.658059835161026 38.0 35.0 40.0 28.0 41.0 46 35.46973252543875 38.0 34.0 40.0 27.0 41.0 47 35.50269376261164 38.0 34.0 40.0 28.0 41.0 48 35.354452975551446 38.0 34.0 40.0 27.0 41.0 49 35.34625552476613 38.0 34.0 40.0 27.0 41.0 50 35.22945320975094 38.0 34.0 40.0 27.0 41.0 51 34.538505676059 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 2.0 13 3.0 14 12.0 15 35.0 16 112.0 17 306.0 18 640.0 19 1286.0 20 2284.0 21 3607.0 22 5467.0 23 8107.0 24 12450.0 25 18488.0 26 24584.0 27 29727.0 28 33667.0 29 39206.0 30 47304.0 31 58690.0 32 73543.0 33 95386.0 34 148630.0 35 218664.0 36 161809.0 37 207081.0 38 315605.0 39 627874.0 40 360.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.625535614249074 23.38496027039737 30.637135046924215 13.352369068429345 2 27.940234162024836 26.001905447105578 32.42566976372081 13.63219062714878 3 27.878405494882273 25.923261256096215 32.74769407175498 13.450639177266535 4 25.77046950441513 27.38194940166713 32.321872546760275 14.525708547157473 5 22.517860053622314 33.10882969574675 30.771799757556686 13.601510493074255 6 21.888753365446767 40.50958063301314 27.111636342515826 10.49002965902427 7 90.81474257728115 2.4025589573813124 5.53211999258056 1.2505784727569778 8 91.25316403520112 1.8725654962312617 5.272439590581808 1.6018308779858093 9 86.50786067190899 4.992711711661074 6.622178130263634 1.877249486166304 10 40.20469972814122 40.415994514110984 11.812694736881548 7.5666110208662385 11 27.90646259459318 23.98085746993347 31.355846462557118 16.756833472916234 12 28.87740686822812 23.2391476637195 30.058849649543873 17.824595818508506 13 23.27409022863492 27.88163744793745 30.564720562528457 18.279551760899178 14 16.962085911869792 32.30074775215323 31.58765712444237 19.149509211534607 15 16.51687266854401 28.91473826801041 37.428358373943524 17.140030689502055 16 20.914764498354046 28.135884421611557 34.13846436326778 16.810886716766625 17 20.832935194188853 27.965761907170815 28.439406969402302 22.761895929238026 18 21.911330196933672 27.98688670177786 31.583535213299534 18.518247887988938 19 24.81104784602039 28.155697699036786 28.692576625391347 18.34067782955148 20 24.799572070679535 29.380420547352326 28.655479425105813 17.164527956862326 21 24.246580218948424 28.525732903905137 30.46022074707766 16.76746613006878 22 23.51283319562403 24.2551050806302 30.558069296820694 21.673992426925075 23 19.251245472923728 28.97230450431208 31.257014274927723 20.519435747836464 24 19.127260259343153 28.187642510393772 34.46479794204218 18.22029928822089 25 19.320240644666903 30.519332700057895 30.55638306044408 19.604043594831126 26 19.13667507911259 33.821779803759554 27.197587557823855 19.843957559303995 27 18.501245004524737 32.2862273833546 31.272330922015314 17.940196690105353 28 17.07581318749262 29.887696657317424 34.15490516793977 18.88158498725018 29 18.410843998778414 27.92454279574244 33.38537246151165 20.279240743967488 30 19.881007919690184 29.9291968081419 31.25523435875241 18.93456091341551 31 24.08245321162454 28.8033529873551 27.91170866332042 19.202485137699938 32 23.855748098768487 28.926916641841522 28.567467254226365 18.64986800516363 33 22.319071520779115 28.99956532573403 28.42380928291861 20.25755387056824 34 19.894263611206352 28.995677614087946 30.125596506118228 20.984462268587478 35 19.669291574626264 28.724146717553534 30.2551556677215 21.3514060400987 36 23.529601879591482 28.870427723224907 28.448493909876287 19.151476487307324 37 19.562449764207944 30.91475513037418 30.38326279244491 19.139532312972964 38 19.72081546391173 31.86241997403196 28.2183226444683 20.19844191758801 39 19.608680744866817 30.866884753238043 28.547794496499186 20.976640005395954 40 22.303145954999973 27.700694916746766 28.32305665941585 21.673102468837417 41 18.546726546793995 27.913722778992494 29.80394691727886 23.735603756934648 42 20.37217110427873 28.95881461329916 28.06473461449826 22.604279667923848 43 20.77597787657874 28.798622157520708 28.4442314790354 21.981168486865155 44 20.622061967313243 30.41595704219151 28.003514866047258 20.95846612444799 45 19.542449127185314 31.643396604669377 26.96727577271782 21.84687849542749 46 21.36868996295901 30.906042909095 27.674464573110523 20.05080255483547 47 19.559358330850817 28.768363582540335 29.963905173560562 21.708372913048287 48 20.273057877253233 28.791455652920096 29.961563178593043 20.973923291233632 49 20.791997122156584 27.31595198348238 30.45389736066535 21.438153533695687 50 19.274056503907385 30.048310672190027 29.135963112642465 21.541669711260127 51 18.905098616724093 30.165176221069334 28.03958158854708 22.89014357365949 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1469.0 1 2400.5 2 3332.0 3 13216.5 4 23101.0 5 14679.0 6 6257.0 7 6787.0 8 7317.0 9 8383.0 10 9449.0 11 10234.0 12 11019.0 13 11848.5 14 12678.0 15 12311.5 16 11945.0 17 11770.5 18 11596.0 19 11955.0 20 12314.0 21 13022.0 22 13730.0 23 15496.0 24 17262.0 25 20107.5 26 26269.0 27 29585.0 28 34444.0 29 39303.0 30 45214.0 31 51125.0 32 59300.0 33 67475.0 34 75082.0 35 82689.0 36 84560.5 37 86432.0 38 97605.0 39 108778.0 40 126437.0 41 144096.0 42 158102.5 43 172109.0 44 175810.0 45 179511.0 46 179780.5 47 180050.0 48 181327.5 49 182605.0 50 172723.0 51 162841.0 52 145587.5 53 128334.0 54 116868.0 55 105402.0 56 91737.5 57 78073.0 58 71656.5 59 65240.0 60 52659.5 61 40079.0 62 33956.5 63 27834.0 64 21934.5 65 16035.0 66 12953.0 67 9871.0 68 7884.0 69 5897.0 70 4630.5 71 3364.0 72 2521.0 73 1678.0 74 1309.5 75 856.5 76 772.0 77 480.0 78 188.0 79 137.5 80 87.0 81 67.0 82 47.0 83 50.5 84 54.0 85 31.0 86 8.0 87 6.0 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2134932.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.515760258208303 #Duplication Level Percentage of deduplicated Percentage of total 1 78.34925588326882 16.073945501101594 2 8.891658023979932 3.648382486358928 3 3.2227216146741107 1.983497520768 4 1.6609548732245252 1.3630300791510848 5 1.0072567096962226 1.033231858729971 6 0.6782087047157236 0.8348380314586661 7 0.4543623112947827 0.6525111774222421 8 0.36514113849718954 0.5992918446254059 9 0.30128445341180965 0.5562971654149812 >10 2.7237664861630178 12.90913289722941 >50 1.0398790680105368 15.53052073501868 >100 1.2990478086756 42.88956676428157 >500 0.00461637456260788 0.6481845208488668 >1k 0.0016157310969127578 0.4515698123038277 >5k 0.0 0.0 >10k+ 2.3081872813039402E-4 0.8259996052868778 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17443 0.8170283643694506 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08904264866515654 0.0 2 0.0 0.0 0.0 0.32675513786855975 0.0 3 0.0 0.0 0.0 0.4520987085302951 0.0 4 0.0 0.0 0.0 0.6685458834286057 0.0 5 0.0 0.0 0.0 1.1702948852703505 0.0 6 0.0 0.0 0.0 1.5614548847457437 0.0 7 0.0 0.0 0.0 1.8439463177281525 0.0 8 0.0 0.0 0.0 2.4307097368909174 0.0 9 0.0 0.0 0.0 2.6345101389646133 0.0 10 4.6839899350424275E-5 0.0 0.0 3.0054821418199738 0.0 11 4.6839899350424275E-5 0.0 0.0 3.61777330612872 0.0 12 4.6839899350424275E-5 0.0 0.0 4.067014780798639 0.0 13 4.6839899350424275E-5 0.0 0.0 4.231703866914731 0.0 14 4.6839899350424275E-5 0.0 0.0 4.298638083086487 0.0 15 4.6839899350424275E-5 0.0 0.0 4.4022011005502755 0.0 16 4.6839899350424275E-5 0.0 0.0 4.634667521026431 0.0 17 4.6839899350424275E-5 0.0 0.0 4.948635366372325 0.0 18 4.6839899350424275E-5 0.0 0.0 5.256701384400065 0.0 19 4.6839899350424275E-5 0.0 0.0 5.49132244024634 0.0 20 3.278792954529699E-4 0.0 0.0 5.711376287394634 0.0 21 3.278792954529699E-4 0.0 0.0 5.993352481484187 0.0 22 4.215590941538185E-4 0.0 0.0 6.318515062774833 0.0 23 4.215590941538185E-4 0.0 0.0 6.650328909773239 0.0 24 4.215590941538185E-4 0.0 0.0 6.895395263174659 0.0 25 4.215590941538185E-4 0.0 0.0 7.111046159784012 0.0 26 4.215590941538185E-4 0.0 0.0 7.308804214841503 0.0 27 4.215590941538185E-4 0.0 0.0 7.517569646246344 0.0 28 4.215590941538185E-4 0.0 0.0 7.735656217621919 0.0 29 4.215590941538185E-4 0.0 0.0 7.981331489714895 0.0 30 4.215590941538185E-4 0.0 0.0 8.267335915148585 0.0 31 4.215590941538185E-4 0.0 0.0 8.521442369124637 0.0 32 4.215590941538185E-4 0.0 0.0 8.740184699091119 0.0 33 4.215590941538185E-4 0.0 0.0 8.97550835342765 0.0 34 4.215590941538185E-4 0.0 0.0 9.212518244140798 0.0 35 4.215590941538185E-4 0.0 0.0 9.48995096799336 0.0 36 4.6839899350424277E-4 0.0 0.0 9.740684949216181 0.0 37 4.6839899350424277E-4 0.0 0.0 9.996571319367549 0.0 38 4.6839899350424277E-4 0.0 0.0 10.276299198288283 0.0 39 4.6839899350424277E-4 0.0 0.0 10.626240086335303 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCGA 25 3.8919334E-5 45.000004 36 CGACTGA 25 3.8919334E-5 45.000004 37 TCGCACG 40 6.8193913E-9 45.0 1 GTCGATC 20 7.034647E-4 45.0 23 CAACGCG 35 1.2125747E-7 45.0 1 CTATACG 20 7.034647E-4 45.0 1 CGATTCG 35 1.2125747E-7 45.0 10 TCGGCGA 20 7.034647E-4 45.0 27 ACCTCGA 20 7.034647E-4 45.0 16 ATATCCG 20 7.034647E-4 45.0 31 CGTACAA 20 7.034647E-4 45.0 32 TAGGCGT 20 7.034647E-4 45.0 17 ACGTACC 20 7.034647E-4 45.0 28 TCGCGGA 40 6.8193913E-9 45.0 39 CGCTTAC 20 7.034647E-4 45.0 26 CGCCACT 20 7.034647E-4 45.0 31 GTCGAAT 120 0.0 44.999996 11 CGTTAAT 30 2.16638E-6 44.999996 41 TTTAGCG 325 0.0 43.615383 1 ACGCTAG 100 0.0 42.750004 1 >>END_MODULE