##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547736_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1189052 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50489213255602 31.0 31.0 33.0 30.0 34.0 2 31.918219724620958 31.0 31.0 34.0 30.0 34.0 3 32.05619434642051 33.0 31.0 34.0 30.0 34.0 4 35.733279116472616 37.0 35.0 37.0 33.0 37.0 5 35.61741034033835 37.0 35.0 37.0 33.0 37.0 6 35.666494821084356 37.0 35.0 37.0 33.0 37.0 7 36.06015296219173 37.0 35.0 37.0 35.0 37.0 8 36.076088346010096 37.0 35.0 37.0 35.0 37.0 9 37.857488991229985 39.0 38.0 39.0 35.0 39.0 10 37.241495746191084 39.0 37.0 39.0 34.0 39.0 11 36.91389274817249 39.0 37.0 39.0 33.0 39.0 12 36.42619246256682 39.0 35.0 39.0 32.0 39.0 13 36.23157776110717 39.0 35.0 39.0 32.0 39.0 14 37.26676797986968 39.0 35.0 41.0 32.0 41.0 15 37.44921332288243 39.0 35.0 41.0 32.0 41.0 16 37.51791343019481 39.0 35.0 41.0 32.0 41.0 17 37.433357834644745 39.0 35.0 41.0 32.0 41.0 18 37.321585599284134 39.0 35.0 41.0 32.0 41.0 19 37.30678977874811 39.0 35.0 41.0 32.0 41.0 20 37.18230573599809 39.0 35.0 41.0 32.0 41.0 21 37.08325455909414 39.0 35.0 41.0 32.0 41.0 22 37.01145198023299 39.0 35.0 41.0 32.0 41.0 23 36.9352425293427 39.0 35.0 41.0 31.0 41.0 24 36.861436673921745 38.0 35.0 41.0 31.0 41.0 25 36.7898367775337 38.0 35.0 41.0 31.0 41.0 26 36.65167292935885 38.0 35.0 41.0 31.0 41.0 27 36.62747550149194 38.0 35.0 41.0 31.0 41.0 28 36.662932319192095 38.0 35.0 41.0 31.0 41.0 29 36.67731015969024 38.0 35.0 41.0 31.0 41.0 30 36.66351093139745 38.0 35.0 41.0 31.0 41.0 31 36.557217009853225 38.0 35.0 41.0 31.0 41.0 32 36.398172661918906 38.0 35.0 41.0 30.0 41.0 33 36.31377769853631 38.0 35.0 41.0 30.0 41.0 34 36.119752542361475 38.0 35.0 41.0 30.0 41.0 35 36.04577848571803 38.0 35.0 41.0 30.0 41.0 36 35.93869149540979 38.0 35.0 41.0 29.0 41.0 37 35.741690859609164 38.0 35.0 41.0 29.0 41.0 38 35.82189761255185 38.0 35.0 41.0 29.0 41.0 39 35.716211738426914 38.0 35.0 40.0 29.0 41.0 40 35.58149433330082 38.0 35.0 40.0 28.0 41.0 41 35.54066853257889 38.0 34.0 40.0 28.0 41.0 42 35.52513514968227 38.0 34.0 40.0 28.0 41.0 43 35.48391912212418 38.0 34.0 40.0 28.0 41.0 44 35.330132744404786 38.0 34.0 40.0 27.0 41.0 45 35.29990530271174 38.0 34.0 40.0 27.0 41.0 46 35.10215028442827 37.0 34.0 40.0 26.0 41.0 47 35.14784719255339 37.0 34.0 40.0 27.0 41.0 48 34.98165176964506 37.0 34.0 40.0 26.0 41.0 49 34.95217114137986 37.0 34.0 40.0 26.0 41.0 50 34.83183662278857 37.0 34.0 40.0 26.0 41.0 51 34.142808724933815 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 1.0 12 0.0 13 8.0 14 16.0 15 30.0 16 97.0 17 237.0 18 452.0 19 912.0 20 1588.0 21 2420.0 22 3734.0 23 5429.0 24 7740.0 25 11116.0 26 15235.0 27 18672.0 28 20622.0 29 23336.0 30 27612.0 31 33859.0 32 42195.0 33 54908.0 34 90932.0 35 126314.0 36 86643.0 37 113099.0 38 173917.0 39 327728.0 40 197.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.73956731917527 23.081917359375367 28.815140128438454 14.363375193010903 2 31.89439990849853 24.663177051970813 29.233120166317367 14.209302873213284 3 29.819385527294013 24.375300659685195 31.65832949273875 14.14698432028204 4 26.293299199698584 27.07829430504301 30.805969797788492 15.822436697469916 5 23.871537998338173 32.08076686301356 29.736714626441906 14.310980512206362 6 23.44514789933493 39.82744236585111 26.239811210947884 10.487598523866072 7 88.4593777227573 3.3305524064548906 6.418222247639297 1.791847623148525 8 88.42523287459252 3.0096244739506766 6.5685941405422135 1.9965485109145773 9 83.06020258155236 5.474697490101358 8.179709550129012 3.285390378217269 10 44.33086189670426 31.20755021647497 14.118558313681822 10.343029573138937 11 33.69474169338263 23.27232114323007 26.151841971587448 16.881095191799854 12 33.73452128250068 21.555323064088032 27.243720207358468 17.466435446052824 13 26.327023544807123 26.967702001258143 27.067781728637602 19.63749272529713 14 19.34734561650794 29.03859545251175 30.21718141847455 21.39687751250576 15 19.080073873976914 26.73339769833447 36.0380370244531 18.14849140323552 16 24.900256675065513 24.718431153557624 32.6794791144542 17.70183305692266 17 24.423238008093843 25.235229409647346 26.96778610186939 23.37374648038942 18 25.12446890464 26.078758540417073 30.172019390236926 18.624753164706 19 27.430171262484738 26.89739389025879 25.814262118057073 19.858172729199396 20 28.404729145571427 26.64626946508647 27.734867777019 17.214133612323092 21 26.512549493209715 26.450903745168418 29.309231219492503 17.72731554212936 22 26.456286184287986 22.02847310294251 30.01197592704104 21.50326478572846 23 23.530510019746824 26.171269212784637 29.926277404184177 20.371943363284366 24 23.082842466099045 24.632143926422057 33.306449171272575 18.978564436206323 25 22.993695818181205 27.11714878743739 29.282234923283422 20.606920471097983 26 21.435647894288895 30.3876533574646 26.607751385137068 21.568947363109437 27 20.385063058638313 30.033589784130548 29.572297931461367 20.009049225769772 28 18.68471690052243 28.304985820636947 32.58410902130437 20.426188257536257 29 21.022797993695818 25.757662406690372 31.63595873014805 21.58358086946576 30 22.013082691085 28.08909955157554 30.404893982769465 19.49292377456999 31 26.29868163881815 26.20583456400561 27.163572324843656 20.331911472332582 32 26.80185559588647 26.251753497744424 27.56641425269879 19.37997665367032 33 25.947561586877615 26.63432717828993 26.630794952617716 20.78731628221474 34 22.07170081712154 25.957653660226804 29.997342420684713 21.973303101966945 35 22.569155932625318 26.42550536057296 29.776662416782447 21.228676290019276 36 24.622304154906598 28.817831347998236 26.082458967311773 20.47740552978339 37 22.09524898826965 29.057013486374018 28.524908919038023 20.32282860631831 38 22.744421606456235 28.470327622341156 27.0988989547976 21.686351816405004 39 22.644762382132992 28.051086075293597 27.509394038275868 21.79475750429754 40 24.965182346945298 25.78020137050356 27.777422686308086 21.47719359624306 41 20.98570962413755 24.998654390220107 29.37701631215456 24.63861967348779 42 21.924272445612132 25.7573260042454 27.581720563945062 24.736680986197406 43 22.155128623474834 26.408264735268094 27.628228201962575 23.808378439294497 44 21.859430874343595 26.78368986385793 27.816613571147435 23.54026569065104 45 21.707208767993325 29.25052899284472 26.188089335033286 22.854172904128667 46 22.771417902665316 28.853490007165373 27.094357521790467 21.280734568378843 47 22.209794020782944 26.50800806020258 28.905968788581156 22.37622913043332 48 22.29296952530251 25.21420425683654 31.025472393133352 21.467353824727596 49 22.680084638855156 25.577518897407348 29.983970423497038 21.75842604024046 50 21.278127449430304 27.465325317984412 29.277609389665045 21.978937842920242 51 19.974736176382528 28.534328187497266 28.7566902036244 22.734245432495804 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 880.0 1 1587.5 2 2295.0 3 7292.5 4 12290.0 5 8377.0 6 4464.0 7 4519.0 8 4574.0 9 4856.5 10 5139.0 11 4991.0 12 4843.0 13 4988.0 14 5133.0 15 4783.0 16 4433.0 17 4522.5 18 4612.0 19 4328.5 20 4045.0 21 4113.5 22 4182.0 23 4633.5 24 5085.0 25 6707.0 26 9871.0 27 11413.0 28 14033.5 29 16654.0 30 19191.5 31 21729.0 32 24892.0 33 28055.0 34 32929.5 35 37804.0 36 38084.5 37 38365.0 38 43032.0 39 47699.0 40 55641.5 41 63584.0 42 73653.0 43 83722.0 44 84453.0 45 85184.0 46 86709.0 47 88234.0 48 87220.0 49 86206.0 50 83786.5 51 81367.0 52 80007.5 53 78648.0 54 73757.5 55 68867.0 56 65390.0 57 61913.0 58 59143.5 59 56374.0 60 52600.5 61 48827.0 62 44616.0 63 40405.0 64 33642.0 65 26879.0 66 22292.5 67 17706.0 68 14740.0 69 11774.0 70 9585.0 71 7396.0 72 6020.0 73 4644.0 74 3506.5 75 1902.0 76 1435.0 77 1140.5 78 846.0 79 557.0 80 268.0 81 283.0 82 298.0 83 170.5 84 43.0 85 32.0 86 21.0 87 17.0 88 13.0 89 7.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1189052.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.13070877576874 #Duplication Level Percentage of deduplicated Percentage of total 1 82.02189803764446 15.691370445939734 2 6.564272575196297 2.511583739216917 3 1.915500590860702 1.099346518907071 4 0.9421705202574684 0.720975593606406 5 0.5774043228595116 0.5523076973247631 6 0.4115114741200681 0.472350370156699 7 0.3400363249630974 0.45535951342361747 8 0.2669087486989716 0.40849228328518944 9 0.1949914567928124 0.3357292296299568 >10 3.4431328942403994 17.325515589828278 >50 2.1328456923216237 29.907230965744485 >100 1.185355582356901 29.37003143464778 >500 0.0030891619793366747 0.3683485075338068 >1k 4.4130885419095355E-4 0.13398328706306475 >5k 4.4130885419095355E-4 0.6473748236922372 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7668 0.6448834870131837 No Hit GGGAATGGTTACATCAGTGCGGCAGAACTGCGCCACGTCATGACAAACTTA 1587 0.13346767004302587 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.410061124324252E-5 0.0 0.0 0.046255336183783385 0.0 2 8.410061124324252E-5 0.0 0.0 0.17560207627589036 0.0 3 8.410061124324252E-5 0.0 0.0 0.2438917726054033 0.0 4 8.410061124324252E-5 0.0 0.0 0.35019494521686184 0.0 5 8.410061124324252E-5 0.0 0.0 0.5929934098761029 0.0 6 8.410061124324252E-5 0.0 0.0 0.7740620258828042 0.0 7 8.410061124324252E-5 0.0 0.0 0.9022313574175057 0.0 8 8.410061124324252E-5 0.0 0.0 1.1390586786784767 0.0 9 8.410061124324252E-5 0.0 0.0 1.2143287257411788 0.0 10 8.410061124324252E-5 0.0 0.0 1.3800069298903666 0.0 11 8.410061124324252E-5 0.0 0.0 1.630206248339013 0.0 12 8.410061124324252E-5 0.0 0.0 1.8222920444185788 0.0 13 8.410061124324252E-5 0.0 0.0 1.9000851098185783 0.0 14 8.410061124324252E-5 0.0 0.0 1.9363324732644156 0.0 15 8.410061124324252E-5 0.0 0.0 1.9955393035796585 0.0 16 8.410061124324252E-5 0.0 0.0 2.1224471259457114 0.0 17 8.410061124324252E-5 0.0 0.0 2.2734077231273315 0.0 18 8.410061124324252E-5 0.0 0.0 2.4226022074728437 0.0 19 8.410061124324252E-5 0.0 0.0 2.535297026538789 0.0 20 2.5230183372972753E-4 0.0 0.0 2.6563178061178148 0.0 21 2.5230183372972753E-4 0.0 0.0 2.808624013079327 0.0 22 2.5230183372972753E-4 0.0 0.0 2.9738817141722986 0.0 23 2.5230183372972753E-4 0.0 0.0 3.1375415036516485 0.0 24 2.5230183372972753E-4 0.0 0.0 3.262178609514134 0.0 25 3.3640244497297006E-4 0.0 0.0 3.3751257304138087 0.0 26 3.3640244497297006E-4 0.0 0.0 3.485633933587429 0.0 27 3.3640244497297006E-4 0.0 0.0 3.6074957192788877 0.0 28 3.3640244497297006E-4 0.0 0.0 3.7333102336987785 0.0 29 3.3640244497297006E-4 0.0 0.0 3.878804291149588 0.0 30 3.3640244497297006E-4 0.0 0.0 4.04692141302483 0.0 31 3.3640244497297006E-4 0.0 0.0 4.189471949082126 0.0 32 3.3640244497297006E-4 0.0 0.0 4.323360122181368 0.0 33 3.3640244497297006E-4 0.0 0.0 4.461285124620286 0.0 34 3.3640244497297006E-4 0.0 0.0 4.61493694136169 0.0 35 4.205030562162126E-4 0.0 0.0 4.777839825339851 0.0 36 4.205030562162126E-4 0.0 0.0 4.923922587069363 0.0 37 4.205030562162126E-4 0.0 0.0 5.088255181438659 0.0 38 4.205030562162126E-4 0.0 0.0 5.282275291576819 0.0 39 4.205030562162126E-4 0.0 0.0 5.560311912346979 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCA 25 3.8908867E-5 45.000004 15 CTATACG 35 1.2119744E-7 45.000004 1 TCGATCT 25 3.8908867E-5 45.000004 36 CCGTACA 25 3.8908867E-5 45.000004 34 CGAGGTA 35 1.2119744E-7 45.000004 13 CGCTAGA 25 3.8908867E-5 45.000004 14 GTCACGA 35 1.2119744E-7 45.000004 21 TATAGCG 35 1.2119744E-7 45.000004 1 ACCGTAC 25 3.8908867E-5 45.000004 33 CACCGTA 25 3.8908867E-5 45.000004 32 ATTGCCG 25 3.8908867E-5 45.000004 15 CGTATTA 20 7.033386E-4 45.0 24 ACGTTAG 20 7.033386E-4 45.0 1 ATCACGT 20 7.033386E-4 45.0 43 CCCCGTA 20 7.033386E-4 45.0 21 TCGTGAC 20 7.033386E-4 45.0 26 TACGATA 20 7.033386E-4 45.0 36 AACGCTA 40 6.8157533E-9 45.0 41 CGAATCG 20 7.033386E-4 45.0 16 AATCCGT 30 2.165565E-6 44.999996 45 >>END_MODULE