SRR1547735_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547735_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1312710
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10603	0.8077183841061621	No Hit
GGTTGAGGGGGTCATTCCCTTGACACAGTTGGGTTTCTCATAAGTATCCTA	1315	0.10017444827875159	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCAA	30	2.165738E-6	45.000004	32
ACGTTCG	30	2.165738E-6	45.000004	1
CCGCTCG	30	2.165738E-6	45.000004	19
TCCGTTC	30	2.165738E-6	45.000004	21
CGGTCTA	120	0.0	45.000004	31
CACGTAC	30	2.165738E-6	45.000004	21
ACGCGAG	45	3.8562575E-10	45.0	1
CGAACTA	20	7.0336537E-4	45.0	27
AGTTTCG	20	7.0336537E-4	45.0	1
CGACGCA	25	3.89111E-5	45.0	19
ACGTTAC	20	7.0336537E-4	45.0	45
CTATCGC	20	7.0336537E-4	45.0	29
TCTTCGA	25	3.89111E-5	45.0	45
CGATTAC	20	7.0336537E-4	45.0	10
TCGATCT	20	7.0336537E-4	45.0	29
CGTTCAT	25	3.89111E-5	45.0	17
ACCTCGT	25	3.89111E-5	45.0	20
CCGTAGT	20	7.0336537E-4	45.0	35
CGCTCAT	20	7.0336537E-4	45.0	24
TATCTCG	20	7.0336537E-4	45.0	16