##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547735_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1312710 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.559136442931035 31.0 31.0 33.0 30.0 34.0 2 31.966291869491357 31.0 31.0 34.0 30.0 34.0 3 32.08891910627633 33.0 31.0 34.0 30.0 34.0 4 35.76153377364383 37.0 35.0 37.0 35.0 37.0 5 35.63877246307258 37.0 35.0 37.0 33.0 37.0 6 35.69439099267927 37.0 35.0 37.0 33.0 37.0 7 36.121045775533055 37.0 35.0 37.0 35.0 37.0 8 36.163529644780645 37.0 35.0 37.0 35.0 37.0 9 37.9849113665623 39.0 38.0 39.0 35.0 39.0 10 37.317697739790205 39.0 37.0 39.0 34.0 39.0 11 36.92384456582185 39.0 37.0 39.0 33.0 39.0 12 36.589209345552334 39.0 35.0 39.0 32.0 39.0 13 36.44786891240259 39.0 35.0 39.0 32.0 39.0 14 37.504822847392035 40.0 36.0 41.0 32.0 41.0 15 37.698362166815215 40.0 36.0 41.0 33.0 41.0 16 37.76341309200052 40.0 36.0 41.0 33.0 41.0 17 37.7025702554258 40.0 36.0 41.0 33.0 41.0 18 37.61044480502167 39.0 36.0 41.0 33.0 41.0 19 37.58734373928743 39.0 36.0 41.0 33.0 41.0 20 37.47276550037708 39.0 35.0 41.0 32.0 41.0 21 37.37976476144769 39.0 35.0 41.0 32.0 41.0 22 37.31736103175873 39.0 35.0 41.0 32.0 41.0 23 37.260948724394574 39.0 35.0 41.0 32.0 41.0 24 37.183686419696656 39.0 35.0 41.0 32.0 41.0 25 37.09748383115844 39.0 35.0 41.0 32.0 41.0 26 36.978088077336196 39.0 35.0 41.0 32.0 41.0 27 36.95757402625104 39.0 35.0 41.0 31.0 41.0 28 37.01269815877079 39.0 35.0 41.0 32.0 41.0 29 36.98637703681697 39.0 35.0 41.0 32.0 41.0 30 36.99007930159746 39.0 35.0 41.0 32.0 41.0 31 36.90559300988033 39.0 35.0 41.0 31.0 41.0 32 36.75002094902911 39.0 35.0 41.0 31.0 41.0 33 36.65984033030905 39.0 35.0 41.0 31.0 41.0 34 36.502900107411385 39.0 35.0 41.0 30.0 41.0 35 36.43036771259456 39.0 35.0 41.0 30.0 41.0 36 36.330999230599296 39.0 35.0 41.0 30.0 41.0 37 36.10817240670064 39.0 35.0 41.0 30.0 41.0 38 36.21705784217382 39.0 35.0 41.0 30.0 41.0 39 36.13433355425037 39.0 35.0 41.0 30.0 41.0 40 36.043942683456365 38.0 35.0 41.0 29.0 41.0 41 35.9993738144754 38.0 35.0 41.0 29.0 41.0 42 35.98378088077336 38.0 35.0 41.0 29.0 41.0 43 35.945361123172674 38.0 35.0 41.0 29.0 41.0 44 35.80717218578361 38.0 35.0 40.0 29.0 41.0 45 35.77466919578582 38.0 35.0 40.0 29.0 41.0 46 35.60741519452126 38.0 35.0 40.0 28.0 41.0 47 35.66477211265245 38.0 35.0 40.0 29.0 41.0 48 35.52435572213208 38.0 34.0 40.0 28.0 41.0 49 35.49882076010695 38.0 34.0 40.0 28.0 41.0 50 35.40054696010543 38.0 34.0 40.0 28.0 41.0 51 34.73158351806568 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 9.0 15 19.0 16 64.0 17 147.0 18 369.0 19 765.0 20 1270.0 21 2126.0 22 3198.0 23 4828.0 24 7152.0 25 10810.0 26 14663.0 27 17597.0 28 19802.0 29 22645.0 30 27360.0 31 34289.0 32 43336.0 33 56296.0 34 92260.0 35 135725.0 36 96639.0 37 124565.0 38 190421.0 39 406048.0 40 302.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.811519680660616 24.16939004045067 30.850378225198256 13.168712053690456 2 29.633963327772317 25.67741542305612 31.3767701929596 13.31185105621196 3 28.61690700916425 25.818040542084695 32.86041852351243 12.704633925238628 4 25.768067585376812 27.746722429173236 32.061841533926 14.423368451523947 5 23.424975813393665 32.75704458715177 30.28544004387869 13.53253955557587 6 21.985891781124543 41.25960798653168 26.545847902430847 10.208652329912928 7 90.06048556040558 2.8392409595417116 5.8063090857843696 1.2939643942683456 8 90.96053202916104 1.9500879859222526 5.6269853966222545 1.4623945882944442 9 86.98996731951459 4.664929801707917 6.6422134363263785 1.7028894424511127 10 43.562477622628 37.292852191268445 11.120049363530407 8.02462082257315 11 27.263066480791643 24.97360422332427 30.705030052334482 17.058299243549605 12 29.40390489902568 23.858734983355046 29.05531305467316 17.68204706294612 13 23.698379687821376 28.393323734869085 29.777483221732144 18.130813355577395 14 16.50646372770833 33.16642670506052 30.70960074959435 19.617508817636796 15 16.68670155632242 30.258015860319492 37.047938996427234 16.00734358693085 16 20.6666361953516 27.617676409869656 35.37262609411066 16.343061300668083 17 20.520754774474177 27.710918633970945 29.174760609731017 22.59356598182386 18 21.839400933945807 28.687828994979853 31.25808442077839 18.21468565029595 19 23.471673103731973 29.99641962047977 28.04000883668137 18.491898439106887 20 25.28410692384457 29.518705578536004 29.46240982395198 15.734777673667452 21 24.037830137654165 27.218197469357285 31.57658584150346 17.167386551485095 22 22.956936413983286 24.921498274561785 31.719115417723643 20.40244989373129 23 19.81816242734496 28.867838288730947 30.67067364459782 20.643325639326278 24 19.737718155571297 28.69879866840353 33.59751963495364 17.965963541071524 25 19.809173389400552 30.236305048335122 30.64401124391526 19.310510318349063 26 18.706492675457643 33.8361100319187 27.596879737337265 19.860517555286393 27 17.571207654394343 33.34590275079797 31.655125656085502 17.427763938722187 28 16.760975386795256 31.48760960151138 33.64116979378537 18.11024521790799 29 17.572883576722962 28.86776211044328 33.47380609578658 20.085548217047176 30 19.2840764525295 30.20613844642 32.11569958330477 18.394085517745733 31 22.33524540835371 30.099717378552764 28.406883470073357 19.158153743020165 32 22.720859900511154 30.403059320032604 29.75447737885748 17.12160340059876 33 22.346215081777395 30.28132641634481 28.45601846561693 18.916440036260866 34 18.817712975447737 30.1523565753289 30.369997943186235 20.65993250603713 35 19.496766231688646 29.60539646989815 30.02582443951825 20.87201285889496 36 22.37188716472031 29.4317099740232 29.616975569623143 18.579427291633337 37 20.119447555057857 30.623366927958195 30.74471894020766 18.512466576776287 38 19.833550441453177 31.605990660541934 28.485804176093733 20.074654721911163 39 19.23181814719169 30.16462127964288 29.403752542450352 21.199808030715086 40 21.22791781886327 29.365282507179803 28.64075081320322 20.76604886075371 41 18.243252508170123 28.512238041913296 30.901950925947087 22.3425585239695 42 19.836902286110416 29.13842356651507 29.530894104562318 21.493780042812197 43 21.049889160591448 29.07092960364437 28.577522834441726 21.301658401322456 44 19.54414912661593 30.677529690487614 29.074433804876932 20.703887378019516 45 18.93617021276596 32.047215302694426 27.76782381485629 21.248790669683327 46 20.790806804244653 31.16529926640309 28.10971196989434 19.934181959457913 47 18.985457564884854 29.732538032010115 31.42552429706485 19.856480106040173 48 19.930296866787028 29.638076955306197 30.291153415453525 20.140472762453246 49 20.60416999946675 28.18147191687425 30.38264353893853 20.831714544720466 50 19.24705380472458 29.17986455500453 30.66572205589963 20.907359584371264 51 17.72348805143558 30.895323414920277 28.536615093965917 22.84457343967822 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 863.0 1 1645.0 2 2427.0 3 8486.5 4 14546.0 5 9541.0 6 4536.0 7 4744.0 8 4952.0 9 5572.0 10 6192.0 11 6791.0 12 7390.0 13 7829.5 14 8269.0 15 7828.0 16 7387.0 17 7288.0 18 7189.0 19 6821.0 20 6453.0 21 7098.0 22 7743.0 23 8386.0 24 9029.0 25 11011.0 26 16369.0 27 19745.0 28 23671.0 29 27597.0 30 33501.0 31 39405.0 32 43731.0 33 48057.0 34 52434.5 35 56812.0 36 58944.5 37 61077.0 38 68185.0 39 75293.0 40 83141.5 41 90990.0 42 98567.5 43 106145.0 44 107991.5 45 109838.0 46 111114.5 47 112391.0 48 107959.0 49 103527.0 50 94413.5 51 85300.0 52 78196.0 53 71092.0 54 62447.0 55 53802.0 56 50778.0 57 47754.0 58 42921.0 59 38088.0 60 32192.5 61 26297.0 62 21902.5 63 17508.0 64 13600.5 65 9693.0 66 7250.0 67 4807.0 68 3995.5 69 3184.0 70 2371.0 71 1558.0 72 1433.0 73 1308.0 74 996.5 75 564.5 76 444.0 77 341.0 78 238.0 79 155.5 80 73.0 81 47.5 82 22.0 83 14.5 84 7.0 85 4.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1312710.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.220683096929474 #Duplication Level Percentage of deduplicated Percentage of total 1 79.10979749943496 15.996541450983381 2 8.475663494252112 3.4276741110697175 3 2.81436702917779 1.7072527144635288 4 1.4018789689776179 1.1338780148778653 5 0.8390184990175801 0.848276359054796 6 0.5649004828801868 0.6853604187373612 7 0.4126214104004356 0.58404407451007 8 0.3195795810948632 0.5169693946854962 9 0.2430248251641438 0.4422715176897759 >10 3.1125860622508843 15.18789561760542 >50 1.4095493768768204 20.85484362793349 >100 1.2905712813992976 36.95321584793868 >500 0.00568366682941558 0.7486385543709312 >1k 3.7891112196103866E-4 0.10075321860585146 >5k 0.0 0.0 >10k+ 3.7891112196103866E-4 0.8123850774736449 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10603 0.8077183841061621 No Hit GGTTGAGGGGGTCATTCCCTTGACACAGTTGGGTTTCTCATAAGTATCCTA 1315 0.10017444827875159 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.617828766444988E-5 0.0 0.0 0.06673217999405809 0.0 2 7.617828766444988E-5 0.0 0.0 0.2501694966900534 0.0 3 7.617828766444988E-5 0.0 0.0 0.34790623976354257 0.0 4 7.617828766444988E-5 0.0 0.0 0.5003389933801068 0.0 5 7.617828766444988E-5 0.0 0.0 0.8941045623176482 0.0 6 7.617828766444988E-5 0.0 0.0 1.2040740148242948 0.0 7 7.617828766444988E-5 0.0 0.0 1.4255242970648505 0.0 8 7.617828766444988E-5 0.0 0.0 1.8566172269579724 0.0 9 7.617828766444988E-5 0.0 0.0 1.9976994157125336 0.0 10 7.617828766444988E-5 0.0 0.0 2.246650059799956 0.0 11 7.617828766444988E-5 0.0 0.0 2.6948069261299143 0.0 12 7.617828766444988E-5 0.0 0.0 3.0529972347281578 0.0 13 7.617828766444988E-5 0.0 0.0 3.1919464314281143 0.0 14 7.617828766444988E-5 0.0 0.0 3.2481660077244783 0.0 15 7.617828766444988E-5 0.0 0.0 3.3288388143611307 0.0 16 7.617828766444988E-5 0.0 0.0 3.5096098909888704 0.0 17 7.617828766444988E-5 0.0 0.0 3.774481797198163 0.0 18 7.617828766444988E-5 0.0 0.0 4.01360544217687 0.0 19 7.617828766444988E-5 0.0 0.0 4.213649625583716 0.0 20 7.617828766444988E-5 0.0 0.0 4.389164400362609 0.0 21 7.617828766444988E-5 0.0 0.0 4.6144997752740515 0.0 22 1.5235657532889976E-4 0.0 0.0 4.88531358792117 0.0 23 1.5235657532889976E-4 0.0 0.0 5.1463765797472405 0.0 24 1.5235657532889976E-4 0.0 0.0 5.344135414524152 0.0 25 1.5235657532889976E-4 0.0 0.0 5.508985229030022 0.0 26 1.5235657532889976E-4 0.0 0.0 5.672692369220925 0.0 27 1.5235657532889976E-4 0.0 0.0 5.848130965712152 0.0 28 1.5235657532889976E-4 0.0 0.0 6.014123454532989 0.0 29 1.5235657532889976E-4 0.0 0.0 6.219881009514668 0.0 30 1.5235657532889976E-4 0.0 0.0 6.445292562713775 0.0 31 1.5235657532889976E-4 0.0 0.0 6.645641459271278 0.0 32 1.5235657532889976E-4 0.0 0.0 6.834335077816121 0.0 33 1.5235657532889976E-4 0.0 0.0 7.024552262114252 0.0 34 1.5235657532889976E-4 0.0 0.0 7.22703415072636 0.0 35 1.5235657532889976E-4 0.0 0.0 7.45076978159685 0.0 36 1.5235657532889976E-4 0.0 0.0 7.661021855550731 0.0 37 1.5235657532889976E-4 0.0 0.0 7.886509587037502 0.0 38 1.5235657532889976E-4 0.0 0.0 8.128604185235124 0.0 39 1.5235657532889976E-4 0.0 0.0 8.461427124041105 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCAA 30 2.165738E-6 45.000004 32 ACGTTCG 30 2.165738E-6 45.000004 1 CCGCTCG 30 2.165738E-6 45.000004 19 TCCGTTC 30 2.165738E-6 45.000004 21 CGGTCTA 120 0.0 45.000004 31 CACGTAC 30 2.165738E-6 45.000004 21 ACGCGAG 45 3.8562575E-10 45.0 1 CGAACTA 20 7.0336537E-4 45.0 27 AGTTTCG 20 7.0336537E-4 45.0 1 CGACGCA 25 3.89111E-5 45.0 19 ACGTTAC 20 7.0336537E-4 45.0 45 CTATCGC 20 7.0336537E-4 45.0 29 TCTTCGA 25 3.89111E-5 45.0 45 CGATTAC 20 7.0336537E-4 45.0 10 TCGATCT 20 7.0336537E-4 45.0 29 CGTTCAT 25 3.89111E-5 45.0 17 ACCTCGT 25 3.89111E-5 45.0 20 CCGTAGT 20 7.0336537E-4 45.0 35 CGCTCAT 20 7.0336537E-4 45.0 24 TATCTCG 20 7.0336537E-4 45.0 16 >>END_MODULE