##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547734_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 878693 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.594158596916103 31.0 31.0 33.0 30.0 34.0 2 32.00916816225917 31.0 31.0 34.0 30.0 34.0 3 32.10918830581329 33.0 31.0 34.0 30.0 34.0 4 35.77229817467534 37.0 35.0 37.0 35.0 37.0 5 35.66680285378397 37.0 35.0 37.0 33.0 37.0 6 35.72895197753937 37.0 35.0 37.0 33.0 37.0 7 36.11294843591561 37.0 35.0 37.0 35.0 37.0 8 36.14379766312011 37.0 35.0 37.0 35.0 37.0 9 37.97866490344182 39.0 38.0 39.0 35.0 39.0 10 37.380360376149575 39.0 37.0 39.0 35.0 39.0 11 36.96603478120345 39.0 37.0 39.0 33.0 39.0 12 36.077738186146924 37.0 35.0 39.0 32.0 39.0 13 35.66447211938641 37.0 35.0 39.0 31.0 39.0 14 36.65969684520077 38.0 35.0 41.0 31.0 41.0 15 36.97946836949879 38.0 35.0 41.0 32.0 41.0 16 37.146737256356886 38.0 35.0 41.0 33.0 41.0 17 37.115119842766475 38.0 35.0 41.0 32.0 41.0 18 37.03243453629425 38.0 35.0 41.0 32.0 41.0 19 36.9653940568549 38.0 35.0 41.0 32.0 41.0 20 36.81589701977824 38.0 35.0 41.0 32.0 41.0 21 36.650561686504844 38.0 35.0 41.0 32.0 41.0 22 36.542192779503196 38.0 35.0 40.0 32.0 41.0 23 36.53546574287038 38.0 35.0 40.0 32.0 41.0 24 36.45677500560492 37.0 35.0 40.0 32.0 41.0 25 36.35364456072826 37.0 35.0 40.0 31.0 41.0 26 36.227094104539354 37.0 35.0 40.0 31.0 41.0 27 36.19162665458812 37.0 35.0 40.0 31.0 41.0 28 36.29952782143479 37.0 35.0 40.0 31.0 41.0 29 36.31486082169768 37.0 35.0 40.0 31.0 41.0 30 36.33713139856582 37.0 35.0 40.0 31.0 41.0 31 36.159169357215774 37.0 35.0 40.0 31.0 41.0 32 35.918821476898074 37.0 35.0 40.0 30.0 41.0 33 35.75880199341522 37.0 35.0 40.0 30.0 41.0 34 35.62860066029888 37.0 35.0 40.0 30.0 41.0 35 35.54715469452926 37.0 35.0 40.0 30.0 41.0 36 35.360716427694314 37.0 35.0 40.0 29.0 41.0 37 35.131941417537185 37.0 34.0 40.0 27.0 41.0 38 35.240311462592736 37.0 34.0 40.0 29.0 41.0 39 35.19889881904146 36.0 34.0 40.0 28.0 41.0 40 35.05674450576026 36.0 34.0 40.0 27.0 41.0 41 35.07368102397538 36.0 34.0 40.0 27.0 41.0 42 35.02564263058884 36.0 34.0 40.0 27.0 41.0 43 34.984751215726085 36.0 34.0 40.0 27.0 41.0 44 34.835584214281894 36.0 34.0 40.0 27.0 41.0 45 34.79859518625959 36.0 34.0 40.0 27.0 41.0 46 34.61698795825163 35.0 34.0 40.0 26.0 41.0 47 34.68334332924013 35.0 34.0 40.0 27.0 41.0 48 34.58328335379934 35.0 34.0 40.0 26.0 41.0 49 34.602995585488905 36.0 34.0 40.0 26.0 41.0 50 34.473726318520804 35.0 34.0 40.0 26.0 41.0 51 33.75621974910464 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 1.0 14 11.0 15 24.0 16 48.0 17 139.0 18 308.0 19 658.0 20 1118.0 21 1916.0 22 2942.0 23 4135.0 24 6326.0 25 9109.0 26 12341.0 27 14532.0 28 15947.0 29 17830.0 30 20863.0 31 25668.0 32 32374.0 33 43050.0 34 80552.0 35 144718.0 36 55508.0 37 68480.0 38 103880.0 39 216049.0 40 161.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.017886793225845 24.905968296094315 30.043143623540875 14.033001287138966 2 30.39172953466114 26.278347500207694 29.49995049465513 13.829972470476037 3 28.694322135262258 24.295288570638437 33.81510948647593 13.195279807623367 4 24.979714189142282 27.929322300280074 32.987402881324876 14.103560629252765 5 23.877736592871457 32.04270433473352 30.151144939131186 13.928414133263836 6 22.032268380424107 40.668811518926404 26.653222456534877 10.64569764411461 7 87.8776774140684 4.225366538711473 6.5135377202276565 1.3834183269924762 8 89.00628547171765 3.2254723777246435 6.148563832874508 1.6196783176831955 9 85.6525544188926 5.281025341046304 7.068338998945024 1.9980812411160669 10 53.60006282057556 27.170695567166238 11.380311439831658 7.848930172426548 11 42.522815135661716 21.199668143481283 23.642159434523776 12.635357286333223 12 40.97938642961763 21.395868636713846 23.293801134184523 14.330943799484006 13 21.49487932645418 39.00179015879266 23.15279625534743 16.35053425940573 14 13.851936910843717 41.26230663041586 27.578460281349688 17.30729617739074 15 13.806187143860257 28.202455237494778 44.511678140146785 13.479679478498177 16 16.820891938367552 22.135717480394177 43.78525833254618 17.25813224869209 17 16.869942061675694 23.745608534493844 27.34618347932668 32.038265924503776 18 20.98855914409242 25.82938523466102 33.516028920225835 19.66602670102072 19 27.728797202208277 25.706020191352387 26.005442173774 20.559740432665333 20 29.861624025683604 25.3310314296347 26.980071538068472 17.827273006613233 21 23.130490398808227 28.476157201662012 28.793901851955116 19.599450547574637 22 22.42091378900253 24.922356272327196 27.828490724291647 24.828239214378627 23 19.595808775078442 31.089697994635213 26.37929288158663 22.935200348699716 24 20.025879345801094 25.245222165193077 37.57671905887494 17.152179430130886 25 16.665661385717197 28.40593927571973 34.33383445640286 20.594564882160206 26 16.721539832455704 36.141860695373694 27.30066132312423 19.835938149046367 27 17.511235437177717 37.00427794462912 28.984412075662373 16.500074542530783 28 14.338568760647915 29.984875263601733 39.199128705930285 16.477427269820062 29 15.168892889780617 25.15759201450336 38.5158411413315 21.157673954384524 30 17.06898768967091 33.74045315030392 32.07331798477966 17.117241175245507 31 27.127790934945423 28.73563349201598 25.27947758773542 18.857097985303174 32 28.249343058383303 27.896660153204817 27.287346092435016 16.566650695976865 33 25.996565353314526 30.74748518538329 25.012262530827034 18.243686930475146 34 19.136490218995714 29.825889133064678 27.86513606003462 23.17248458790499 35 20.159145458083767 27.49458570854667 30.725293134234594 21.620975699134963 36 27.92499769544084 26.537596179780653 28.3625794219369 17.174826702841607 37 19.63108844613534 32.712449057862074 30.571200635489298 17.085261860513285 38 19.78324625324203 32.892489185642766 25.487969063142646 21.836295497972557 39 19.47563028270397 32.37968209602216 29.287931052142213 18.85675656913165 40 23.460526031275997 28.92136388932198 26.3619944622297 21.256115617172323 41 17.506227999995446 26.050736719195438 29.344719942004772 27.098315338804333 42 21.802609102382746 25.757801644032675 26.20095983466353 26.238629418921057 43 22.08393602771389 26.75291597861824 26.825182401589633 24.337965592078234 44 18.556310338195477 30.98101384670186 27.9520833783813 22.510592436721357 45 17.836832659415748 38.419903197134836 23.166794318379687 20.576469825069736 46 21.744909769396138 34.38459166056859 25.622828450892403 18.247670119142864 47 20.084033900349723 28.79014627406842 29.165362646567118 21.960457179014742 48 22.325772482539406 25.59062152537917 32.305253370631156 19.778352621450267 49 20.253831542984866 25.746648715763072 32.106890574978976 21.89262916627309 50 19.04225935565664 31.411994860548564 28.795950348984228 20.749795434810565 51 17.140457474908757 34.82922932127603 25.52916661450586 22.501146589309347 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 690.0 1 1249.5 2 1809.0 3 6103.0 4 10397.0 5 6916.0 6 3435.0 7 3632.0 8 3829.0 9 4116.5 10 4404.0 11 4654.5 12 4905.0 13 4836.0 14 4767.0 15 4541.5 16 4316.0 17 4255.0 18 4194.0 19 3911.5 20 3629.0 21 3506.0 22 3383.0 23 3703.5 24 4024.0 25 4989.5 26 7656.5 27 9358.0 28 11111.0 29 12864.0 30 14981.5 31 17099.0 32 19633.5 33 22168.0 34 26672.0 35 31176.0 36 30229.0 37 29282.0 38 33608.0 39 37934.0 40 51098.5 41 64263.0 42 74950.0 43 85637.0 44 92547.5 45 99458.0 46 91461.5 47 83465.0 48 74673.5 49 65882.0 50 63207.5 51 60533.0 52 53201.0 53 45869.0 54 40693.5 55 35518.0 56 34176.0 57 32834.0 58 29697.0 59 26560.0 60 24368.5 61 22177.0 62 18158.5 63 14140.0 64 12173.0 65 10206.0 66 7745.0 67 5284.0 68 4282.5 69 3281.0 70 2623.5 71 1966.0 72 1387.5 73 809.0 74 605.0 75 424.5 76 448.0 77 361.5 78 275.0 79 148.5 80 22.0 81 15.5 82 9.0 83 15.0 84 21.0 85 15.5 86 10.0 87 5.5 88 1.0 89 1.5 90 2.0 91 3.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 878693.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.969957995397635 #Duplication Level Percentage of deduplicated Percentage of total 1 82.78005794372237 14.04774106161551 2 7.847668684139775 2.6634921586329883 3 2.4444423463375466 1.2444625181855824 4 1.1162681194262567 0.7577209239306035 5 0.633250784510514 0.537311960684801 6 0.4101966808548299 0.4176612266374796 7 0.2700367092033264 0.32077581286770984 8 0.21735701748038955 0.2950831565317696 9 0.15271452639176095 0.23324031883397042 >10 1.5208522460287672 6.016928611417067 >50 0.6760037968560365 8.543090916471156 >100 1.9203888955462531 62.79741987003381 >500 0.009416968314412449 0.9528977054728058 >1k 6.726405938866035E-4 0.3234921055713862 >5k 6.726405938866035E-4 0.848681653113358 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7435 0.8461430784130521 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2834 0.32252447669436307 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06099968931128392 0.0 2 0.0 0.0 0.0 0.23967415240590287 0.0 3 0.0 0.0 0.0 0.3262800545810653 0.0 4 0.0 0.0 0.0 0.5232771855471706 0.0 5 0.0 0.0 0.0 0.8578650336351832 0.0 6 0.0 0.0 0.0 1.1446546177106225 0.0 7 0.0 0.0 0.0 1.300568002704016 0.0 8 0.0 0.0 0.0 1.6154675182344687 0.0 9 0.0 0.0 0.0 1.7124297109456887 0.0 10 0.0 0.0 0.0 1.8930388656789117 0.0 11 0.0 0.0 0.0 2.199516782311911 0.0 12 0.0 0.0 0.0 2.4090325062336904 0.0 13 0.0 0.0 0.0 2.4938175221607546 0.0 14 0.0 0.0 0.0 2.535584100476503 0.0 15 0.0 0.0 0.0 2.596469984397281 0.0 16 0.0 0.0 0.0 2.7416856626830985 0.0 17 0.0 0.0 0.0 2.909890029851154 0.0 18 0.0 0.0 0.0 3.09129582231792 0.0 19 0.0 0.0 0.0 3.21705077882719 0.0 20 1.1380539050612672E-4 0.0 0.0 3.3251658998080105 0.0 21 1.1380539050612672E-4 0.0 0.0 3.478575566210269 0.0 22 2.2761078101225343E-4 0.0 0.0 3.6384721398713773 0.0 23 2.2761078101225343E-4 0.0 0.0 3.809066420240061 0.0 24 2.2761078101225343E-4 0.0 0.0 3.9355042090923678 0.0 25 2.2761078101225343E-4 0.0 0.0 4.048057740302927 0.0 26 2.2761078101225343E-4 0.0 0.0 4.155262418159698 0.0 27 2.2761078101225343E-4 0.0 0.0 4.255183551024078 0.0 28 2.2761078101225343E-4 0.0 0.0 4.364664336690971 0.0 29 2.2761078101225343E-4 0.0 0.0 4.475738397824951 0.0 30 2.2761078101225343E-4 0.0 0.0 4.629603285789234 0.0 31 2.2761078101225343E-4 0.0 0.0 4.775387991027583 0.0 32 2.2761078101225343E-4 0.0 0.0 4.902394806832421 0.0 33 2.2761078101225343E-4 0.0 0.0 5.025190823188531 0.0 34 2.2761078101225343E-4 0.0 0.0 5.15891215703323 0.0 35 2.2761078101225343E-4 0.0 0.0 5.327116524201285 0.0 36 2.2761078101225343E-4 0.0 0.0 5.466869543742809 0.0 37 2.2761078101225343E-4 0.0 0.0 5.60992291960901 0.0 38 2.2761078101225343E-4 0.0 0.0 5.745806555873325 0.0 39 2.2761078101225343E-4 0.0 0.0 5.886583823929405 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGGA 30 2.1649157E-6 45.000004 13 AACGTAG 45 3.8380676E-10 45.000004 1 AGCCGTC 30 2.1649157E-6 45.000004 31 AGCCGTA 45 3.8380676E-10 45.000004 21 CGAACCG 30 2.1649157E-6 45.000004 36 CGAGTGA 30 2.1649157E-6 45.000004 12 CGAGTAT 30 2.1649157E-6 45.000004 19 ACGTTCG 30 2.1649157E-6 45.000004 33 CCTAGAT 30 2.1649157E-6 45.000004 30 TAGACGC 30 2.1649157E-6 45.000004 12 GCGCGAC 30 2.1649157E-6 45.000004 9 GCAACCG 60 0.0 45.000004 1 GAGTATC 30 2.1649157E-6 45.000004 21 GAGTACT 30 2.1649157E-6 45.000004 22 TGGAACG 45 3.8380676E-10 45.000004 1 ATAGCGT 30 2.1649157E-6 45.000004 37 TCCTCGA 30 2.1649157E-6 45.000004 36 TTACTAA 75 0.0 45.000004 28 TACGGTG 30 2.1649157E-6 45.000004 15 TAACGGA 30 2.1649157E-6 45.000004 44 >>END_MODULE