SRR1547733_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547733_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1219928
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8105	0.6643834718114512	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1540	0.12623695824671619	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTTA	25	3.890947E-5	45.0	44
CTCCGTA	20	7.0334575E-4	45.0	40
TTAATCG	85	0.0	45.0	20
ACGCATA	20	7.0334575E-4	45.0	24
GCGGTAT	20	7.0334575E-4	45.0	37
CGGCATA	25	3.890947E-5	45.0	6
GACGTAA	20	7.0334575E-4	45.0	42
CGTGAAT	20	7.0334575E-4	45.0	17
ATTACGC	35	1.2120108E-7	45.0	35
TTCACGT	20	7.0334575E-4	45.0	15
ATTAACG	20	7.0334575E-4	45.0	13
TGACGTA	20	7.0334575E-4	45.0	19
CGCGAAT	20	7.0334575E-4	45.0	16
GCGCATC	25	3.890947E-5	45.0	34
TAGCCCG	40	6.8157533E-9	45.0	13
GCCGATA	35	1.2120108E-7	45.0	9
ACGATAC	40	6.8157533E-9	45.0	41
GTAGCAC	25	3.890947E-5	45.0	31
CCGTACA	35	1.2120108E-7	45.0	42
TACGCGG	45	3.8562575E-10	45.0	2