##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547732_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1543245 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.579964296012623 31.0 31.0 33.0 30.0 34.0 2 32.00185258983505 31.0 31.0 34.0 30.0 34.0 3 32.160312199294346 33.0 31.0 34.0 30.0 34.0 4 35.827108463011385 37.0 35.0 37.0 35.0 37.0 5 35.72001529245195 37.0 35.0 37.0 33.0 37.0 6 35.77675417707493 37.0 35.0 37.0 33.0 37.0 7 36.121230912784426 37.0 35.0 37.0 35.0 37.0 8 36.145872495941994 37.0 35.0 37.0 35.0 37.0 9 37.96320480545863 39.0 38.0 39.0 35.0 39.0 10 37.33788218980136 39.0 37.0 39.0 34.0 39.0 11 37.00080738962381 39.0 37.0 39.0 33.0 39.0 12 36.634331554613816 39.0 35.0 39.0 33.0 39.0 13 36.50159566368269 39.0 35.0 39.0 32.0 39.0 14 37.586104604259205 40.0 36.0 41.0 33.0 41.0 15 37.751946061707635 40.0 36.0 41.0 33.0 41.0 16 37.81504621754809 40.0 36.0 41.0 33.0 41.0 17 37.740617335549445 40.0 36.0 41.0 33.0 41.0 18 37.65475086587029 39.0 36.0 41.0 33.0 41.0 19 37.63671743631115 39.0 36.0 41.0 33.0 41.0 20 37.52808594876381 39.0 35.0 41.0 33.0 41.0 21 37.43665458174172 39.0 35.0 41.0 32.0 41.0 22 37.35216248878176 39.0 35.0 41.0 32.0 41.0 23 37.25756052992234 39.0 35.0 41.0 32.0 41.0 24 37.171130961059326 39.0 35.0 41.0 32.0 41.0 25 37.06960916769534 39.0 35.0 41.0 32.0 41.0 26 36.94686326539208 39.0 35.0 41.0 31.0 41.0 27 36.91658809845488 39.0 35.0 41.0 31.0 41.0 28 36.98325411713629 39.0 35.0 41.0 31.0 41.0 29 36.95208473055153 39.0 35.0 41.0 31.0 41.0 30 36.973271904331455 39.0 35.0 41.0 31.0 41.0 31 36.88796399793941 39.0 35.0 41.0 31.0 41.0 32 36.72710165916624 39.0 35.0 41.0 31.0 41.0 33 36.658020599451156 39.0 35.0 41.0 31.0 41.0 34 36.51303908323047 39.0 35.0 41.0 30.0 41.0 35 36.433848157615934 39.0 35.0 41.0 30.0 41.0 36 36.315427556868805 39.0 35.0 41.0 30.0 41.0 37 36.12386691678898 39.0 35.0 41.0 30.0 41.0 38 36.185318598148704 39.0 35.0 41.0 30.0 41.0 39 36.079593324455935 38.0 35.0 41.0 30.0 41.0 40 35.93827940476075 38.0 35.0 41.0 29.0 41.0 41 35.88636541832308 38.0 35.0 41.0 29.0 41.0 42 35.883424861250155 38.0 35.0 40.0 29.0 41.0 43 35.842167640264506 38.0 35.0 40.0 29.0 41.0 44 35.69706754274273 38.0 35.0 40.0 29.0 41.0 45 35.643821298627245 38.0 35.0 40.0 29.0 41.0 46 35.45893944253829 38.0 34.0 40.0 28.0 41.0 47 35.46914391428451 38.0 34.0 40.0 28.0 41.0 48 35.32757792832635 37.0 34.0 40.0 28.0 41.0 49 35.28885303370495 37.0 34.0 40.0 28.0 41.0 50 35.175112182446725 37.0 34.0 40.0 27.0 41.0 51 34.48386808316243 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 2.0 12 2.0 13 2.0 14 12.0 15 31.0 16 74.0 17 183.0 18 498.0 19 967.0 20 1564.0 21 2567.0 22 3875.0 23 5792.0 24 8592.0 25 12360.0 26 17009.0 27 20559.0 28 23328.0 29 26840.0 30 32403.0 31 39609.0 32 50529.0 33 65994.0 34 111041.0 35 156407.0 36 116070.0 37 153298.0 38 237771.0 39 455544.0 40 318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.58701955943483 23.188800222906927 28.976150902805454 14.248029314852795 2 30.15224413492349 25.674277253449713 30.20395335802157 13.969525253605228 3 28.940900505104505 26.133828394065752 31.165563471775382 13.759707629054363 4 25.860313819257474 28.6356346529553 30.980822876471333 14.523228651315895 5 23.50871054174807 32.54486487887536 29.28718382369617 14.6592407556804 6 23.10747807379904 40.043285414823956 26.105770632660402 10.7434658787166 7 91.07018004270223 2.615592469115403 5.197748899235053 1.1164785889473154 8 91.71622133880233 2.081911815687075 5.116556347177538 1.085310498333058 9 87.02098500238135 4.7629507952399 6.188777543423112 2.027286658955642 10 44.21067296508331 34.62839665769207 11.495582360545473 9.66534801667914 11 30.427897061062893 23.885773159802884 27.507427530949396 18.17890224818483 12 31.032337703993857 22.090141228385644 28.074997813049773 18.802523254570726 13 24.36871656801091 28.25092580892859 27.62179692790192 19.75856069515858 14 18.945274405554528 29.586682607103864 29.984480753218058 21.48356223412355 15 19.06340211696782 26.404621430816235 34.90962225699743 19.622354195218517 16 24.019063726109593 24.843106570894445 32.47397529232235 18.663854410673615 17 22.976585052924197 25.099903126204847 27.540345181743664 24.383166639127293 18 24.125268508888738 24.832933202440312 30.360182602243974 20.681615686426976 19 25.859989826631548 26.594869900761058 26.472271091109967 21.072869181497428 20 27.519933646310207 26.35122744606333 27.596071913403254 18.532766994223213 21 26.22713827033297 25.3340201977003 29.02429620701833 19.414545324948403 22 26.04479522046078 22.870639464245794 28.497354600209302 22.587210715084126 23 23.248868455753946 26.997268742163428 28.335811876921678 21.418050925160944 24 22.411023525104568 25.618615320315307 32.374315160586946 19.596045993993176 25 22.448995460863312 28.386030733940498 28.82990063146163 20.335073173734568 26 22.13180668007996 29.61026927027141 26.85970147319447 21.39822257645416 27 20.364491704168813 28.864891835061833 29.146959815194606 21.623656645574744 28 19.479862238335453 28.16040226924435 31.306305868478436 21.053429623941756 29 20.281225599305362 26.25532562878869 31.25530942915739 22.20813934274856 30 21.876889281999944 27.344329643057325 30.522826900459744 20.255954174482987 31 25.50528269976575 26.772417859769508 27.164837728293307 20.55746171217143 32 25.289698006473373 26.6454127504058 27.57915949832982 20.48572974479101 33 24.493388930467944 26.859312682043356 26.82477506811945 21.822523319369253 34 21.02368710088158 26.16933798586744 29.396434137159037 23.41054077609194 35 21.60564265557316 27.422411865905932 29.165686588973234 21.806258889547674 36 24.945099449536528 27.197431386461645 27.31471671704752 20.542752446954307 37 21.712106632453047 28.772100346996105 28.18236896928226 21.333424051268594 38 21.84902591617015 28.849664181643224 27.923952450842222 21.37735745134441 39 21.962812126396003 28.30820770519263 27.513259398216093 22.215720770195272 40 24.43915256488762 26.46676321646919 27.808675874537098 21.285408344106088 41 20.334101195856782 25.8417814410544 28.938114168521523 24.88600319456729 42 21.93028326675285 26.47103991913144 27.661259229739933 23.93741758437578 43 22.549562771951308 26.59849861817145 27.852803670188464 22.999134939688773 44 21.827707201384097 27.907040035768787 28.006246577827888 22.259006185019228 45 21.597348444349407 28.437739957038577 26.557157159103056 23.407754439508956 46 22.139906495728155 28.8556256459603 27.43310362256155 21.571364235749993 47 21.595339690068656 27.134706414082014 29.547285103791037 21.722668792058293 48 22.395471879060032 26.7406017839034 29.575537260771945 21.288389076264625 49 22.69529465509365 26.468642373699574 28.788559172393235 22.04750379881354 50 21.212574801797512 28.27205012813908 29.365460442120337 21.14991462794307 51 20.89758917087047 28.246454710690784 28.006052182252333 22.849903936186415 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1138.0 1 2046.5 2 2955.0 3 8450.5 4 13946.0 5 9444.0 6 4942.0 7 5072.5 8 5203.0 9 5414.0 10 5625.0 11 5710.0 12 5795.0 13 5608.5 14 5422.0 15 5133.0 16 4844.0 17 4767.0 18 4690.0 19 4847.5 20 5005.0 21 5609.5 22 6214.0 23 6495.5 24 6777.0 25 8727.5 26 13108.0 27 15538.0 28 19282.5 29 23027.0 30 26155.0 31 29283.0 32 34062.0 33 38841.0 34 45290.0 35 51739.0 36 55653.0 37 59567.0 38 61832.5 39 64098.0 40 74125.0 41 84152.0 42 94406.0 43 104660.0 44 107807.5 45 110955.0 46 110741.5 47 110528.0 48 112200.5 49 113873.0 50 111440.5 51 109008.0 52 105066.0 53 101124.0 54 96316.0 55 91508.0 56 87899.5 57 84291.0 58 77782.0 59 71273.0 60 65045.5 61 58818.0 62 50437.0 63 42056.0 64 37120.0 65 32184.0 66 27085.5 67 21987.0 68 18820.0 69 15653.0 70 13247.0 71 10841.0 72 8739.5 73 6638.0 74 5139.5 75 3128.0 76 2615.0 77 1851.5 78 1088.0 79 922.5 80 757.0 81 475.0 82 193.0 83 117.0 84 41.0 85 28.5 86 16.0 87 12.5 88 9.0 89 8.5 90 8.0 91 4.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1543245.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.490011325380753 #Duplication Level Percentage of deduplicated Percentage of total 1 79.90174459591474 14.77384162496144 2 5.3668765998203485 1.9846721822519837 3 1.7746107700266067 0.9843771970780386 4 1.0069696026656998 0.7447551743041178 5 0.6559630939662267 0.6064382518233665 6 0.5147121278848669 0.5710219844341208 7 0.3777991762731102 0.4889857733606529 8 0.32925007855016825 0.4870270145020091 9 0.3051894625649004 0.5078660957290687 >10 6.459166609561323 33.22811703797176 >50 3.0680026528663378 38.88359395630675 >100 0.2351324387457271 5.510764093620616 >500 0.0035252239692010077 0.43938802714641945 >1k 7.050447938402015E-4 0.20434378654562005 >5k 3.5252239692010076E-4 0.5848077999640521 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8972 0.5813723679649051 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1783 0.11553577040586556 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.479852518556677E-5 0.0 0.0 0.03278805374389679 0.0 2 6.479852518556677E-5 0.0 0.0 0.12020126421922638 0.0 3 6.479852518556677E-5 0.0 0.0 0.1661434185757932 0.0 4 6.479852518556677E-5 0.0 0.0 0.2299699658835765 0.0 5 6.479852518556677E-5 0.0 0.0 0.38373686614892644 0.0 6 6.479852518556677E-5 0.0 0.0 0.503614137742225 0.0 7 6.479852518556677E-5 0.0 0.0 0.5761236874248742 0.0 8 6.479852518556677E-5 0.0 0.0 0.7144685386960593 0.0 9 6.479852518556677E-5 0.0 0.0 0.7723984202119559 0.0 10 6.479852518556677E-5 0.0 0.0 0.8867030186392958 0.0 11 6.479852518556677E-5 0.0 0.0 1.0883560290167795 0.0 12 6.479852518556677E-5 0.0 0.0 1.2368094502169131 0.0 13 6.479852518556677E-5 0.0 0.0 1.301283982776552 0.0 14 6.479852518556677E-5 0.0 0.0 1.3345904247219333 0.0 15 6.479852518556677E-5 0.0 0.0 1.3861700507696444 0.0 16 6.479852518556677E-5 0.0 0.0 1.4868669589080152 0.0 17 6.479852518556677E-5 0.0 0.0 1.6144552549983961 0.0 18 6.479852518556677E-5 0.0 0.0 1.7450890817724989 0.0 19 6.479852518556677E-5 0.0 0.0 1.8302343438663335 0.0 20 1.2959705037113355E-4 0.0 0.0 1.9225722422557663 0.0 21 1.2959705037113355E-4 0.0 0.0 2.037978415611261 0.0 22 1.9439557555670032E-4 0.0 0.0 2.161484404614951 0.0 23 1.9439557555670032E-4 0.0 0.0 2.2925718210653527 0.0 24 1.9439557555670032E-4 0.0 0.0 2.397091842189672 0.0 25 1.9439557555670032E-4 0.0 0.0 2.485930620219084 0.0 26 1.9439557555670032E-4 0.0 0.0 2.57353822626997 0.0 27 1.9439557555670032E-4 0.0 0.0 2.6789654267468874 0.0 28 1.9439557555670032E-4 0.0 0.0 2.7759688189496807 0.0 29 1.9439557555670032E-4 0.0 0.0 2.88735748374367 0.0 30 1.9439557555670032E-4 0.0 0.0 3.0286182686482057 0.0 31 1.9439557555670032E-4 0.0 0.0 3.142210083298504 0.0 32 1.9439557555670032E-4 0.0 0.0 3.2499700306821016 0.0 33 1.9439557555670032E-4 0.0 0.0 3.3591555456197817 0.0 34 1.9439557555670032E-4 0.0 0.0 3.480523183292348 0.0 35 1.9439557555670032E-4 0.0 0.0 3.6182848478368634 0.0 36 1.9439557555670032E-4 0.0 0.0 3.730969483134564 0.0 37 2.591941007422671E-4 0.0 0.0 3.8501987694760067 0.0 38 2.591941007422671E-4 0.0 0.0 3.9752599230841508 0.0 39 2.591941007422671E-4 0.0 0.0 4.17814410544016 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCCGC 25 3.8914295E-5 45.0 44 CGCCGAT 25 3.8914295E-5 45.0 23 CGTTAGG 220 0.0 43.977272 2 GCGTTAG 115 0.0 41.086956 1 CGTTTTT 4170 0.0 40.95324 1 ATTCCGG 50 1.0822987E-9 40.5 2 AATGCGG 300 0.0 39.75 2 TACGGGA 630 0.0 39.642853 4 ACGTATG 40 3.459245E-7 39.375 1 TAGGGAT 2455 0.0 39.31772 5 AGGGATC 1710 0.0 38.94737 6 GTAGGGA 1875 0.0 38.639996 4 GCGATAA 105 0.0 38.57143 9 ATAGGGA 2010 0.0 38.395523 4 TAGGGAC 1700 0.0 38.25 5 ACGGGAT 770 0.0 37.98701 5 CGAATAT 350 0.0 37.92857 14 AAGGGAT 2515 0.0 37.842945 5 ACCGTTC 185 0.0 37.7027 45 GGGCGAT 2110 0.0 37.642178 7 >>END_MODULE