##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547730_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 737037 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.539313494437863 31.0 31.0 33.0 30.0 34.0 2 31.959806631146062 31.0 31.0 34.0 30.0 34.0 3 32.09358281877301 33.0 31.0 34.0 30.0 34.0 4 35.782029938795475 37.0 35.0 37.0 35.0 37.0 5 35.68234701921342 37.0 35.0 37.0 33.0 37.0 6 35.731747524208416 37.0 35.0 37.0 33.0 37.0 7 36.078921411001076 37.0 35.0 37.0 35.0 37.0 8 36.09232236644836 37.0 35.0 37.0 35.0 37.0 9 37.89222793428281 39.0 38.0 39.0 35.0 39.0 10 37.271980918189996 39.0 37.0 39.0 34.0 39.0 11 37.013111960457884 39.0 37.0 39.0 33.0 39.0 12 36.63276606194805 39.0 35.0 39.0 32.0 39.0 13 36.51733766418782 39.0 35.0 39.0 32.0 39.0 14 37.60195621115358 40.0 36.0 41.0 32.0 41.0 15 37.72000048844224 40.0 36.0 41.0 33.0 41.0 16 37.7766095867643 40.0 36.0 41.0 33.0 41.0 17 37.6915080246989 40.0 36.0 41.0 33.0 41.0 18 37.564483194195134 39.0 36.0 41.0 32.0 41.0 19 37.51501213643277 39.0 36.0 41.0 32.0 41.0 20 37.383545195153026 39.0 35.0 41.0 32.0 41.0 21 37.2923516729825 39.0 35.0 41.0 32.0 41.0 22 37.21068955832611 39.0 35.0 41.0 32.0 41.0 23 37.102400557909576 39.0 35.0 41.0 32.0 41.0 24 36.98768582852693 39.0 35.0 41.0 31.0 41.0 25 36.87234426494192 39.0 35.0 41.0 31.0 41.0 26 36.71735204609809 38.0 35.0 41.0 31.0 41.0 27 36.69162606490583 39.0 35.0 41.0 31.0 41.0 28 36.695118426890375 39.0 35.0 41.0 31.0 41.0 29 36.661574656360536 39.0 35.0 41.0 31.0 41.0 30 36.65902661603149 39.0 35.0 41.0 31.0 41.0 31 36.554181133375934 39.0 35.0 41.0 30.0 41.0 32 36.37884258185139 39.0 35.0 41.0 30.0 41.0 33 36.23840458484445 39.0 35.0 41.0 30.0 41.0 34 36.02378849365771 38.0 35.0 41.0 29.0 41.0 35 35.891500698065364 38.0 35.0 41.0 29.0 41.0 36 35.74985923366127 38.0 35.0 41.0 28.0 41.0 37 35.54390213788453 38.0 35.0 41.0 27.0 41.0 38 35.58753088379552 38.0 35.0 40.0 27.0 41.0 39 35.467637309931526 38.0 34.0 40.0 27.0 41.0 40 35.31325157353023 38.0 34.0 40.0 26.0 41.0 41 35.23091920758388 38.0 34.0 40.0 26.0 41.0 42 35.19610141688952 38.0 34.0 40.0 26.0 41.0 43 35.141752720691095 38.0 34.0 40.0 26.0 41.0 44 34.975354018862014 37.0 34.0 40.0 26.0 41.0 45 34.90087471863692 37.0 34.0 40.0 26.0 41.0 46 34.72016872965672 37.0 34.0 40.0 25.0 41.0 47 34.72837320243082 37.0 34.0 40.0 25.0 41.0 48 34.56010078191461 36.0 34.0 40.0 24.0 41.0 49 34.51856012656081 36.0 34.0 40.0 24.0 41.0 50 34.38478936606982 36.0 33.0 40.0 24.0 41.0 51 33.71039445780877 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 7.0 14 5.0 15 15.0 16 50.0 17 152.0 18 288.0 19 549.0 20 948.0 21 1578.0 22 2437.0 23 3629.0 24 5250.0 25 7461.0 26 10425.0 27 12105.0 28 13604.0 29 14646.0 30 17108.0 31 20688.0 32 25392.0 33 32918.0 34 52820.0 35 70319.0 36 60913.0 37 78031.0 38 113662.0 39 191921.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.503695201190716 23.09232779358431 27.526569222440667 14.87740778278431 2 33.15613734452951 24.750996218643024 28.12260442827158 13.970262008555881 3 29.609639678876366 25.445940977182964 31.54020761508581 13.404211728854861 4 25.859760093455282 27.591694853854015 30.70809199538151 15.840453057309198 5 23.805317779161697 32.23257448404897 29.32091604627719 14.641191690512144 6 23.187438351127557 40.395801024914626 26.19719227121569 10.219568352742128 7 88.49487881883813 3.0705378427405954 6.925839544012037 1.508743794409236 8 88.80897431200876 2.6377237506393847 7.1510656859832 1.402236251368656 9 83.79728561795406 5.153472620777519 8.457241631017167 2.5920001302512627 10 41.92584632793198 32.96130316388458 14.548387665748125 10.564462842435319 11 32.65087098748096 25.444855549992738 25.026016332965646 16.87825712956066 12 29.92156431766655 22.55694083200708 28.841835620192747 18.67965923013363 13 24.730508780427577 25.763971143918145 29.636232645036813 19.869287430617458 14 21.520357865344618 26.400574190983626 31.143483977059493 20.93558396661226 15 20.835453308314236 25.180554029173567 33.88052431560424 20.103468346907956 16 25.16929272207501 23.93963939395173 31.666388525949174 19.224679358024087 17 24.473533893142406 24.037056484274196 28.567900933060347 22.921508689523048 18 25.340654539731382 24.660634405057007 29.776659787771848 20.22205126743976 19 27.124147091665684 25.975358089213973 26.900277733682298 20.000217085438045 20 28.8916295925442 25.5588254049661 27.41761946822208 18.131925534267616 21 28.2661521741785 25.118820357729664 28.4544737916821 18.160553676409734 22 27.33363453937862 22.324795091698245 28.879554215052977 21.46201615387016 23 25.390719868880396 25.453946002710854 28.558132088348348 20.597202040060402 24 23.30222227649358 25.67971485827713 30.941323162880565 20.07673970234873 25 24.09254894937432 26.457830475267862 28.5969361103988 20.85268446495902 26 23.284584084652465 27.75355918359594 27.125775232451016 21.836081499300576 27 22.612433297107202 26.728101845633255 28.979277838154665 21.680187019104874 28 20.91523220679559 27.067026485780225 30.42058946837133 21.597151839052856 29 22.263739812248232 25.77061938545826 30.166328149061716 21.79931265323179 30 23.029644373348965 25.693282698154906 30.12209699106015 21.154975937435978 31 25.379865596978167 25.557197264180765 27.4425842935972 21.62035284524386 32 25.909825422604293 25.829910845724164 26.802453608163496 21.457810123508047 33 25.220036443217914 25.61581033245278 26.480624446262535 22.683528778066773 34 22.710800136221113 27.12794608683146 28.63886073562114 21.522393041326286 35 23.744398178110462 27.421418463387866 28.011890854868888 20.822292503632788 36 25.442413338814738 28.328157202419963 25.688805310995242 20.540624147770057 37 23.415785096270607 28.179317998960702 26.872599340331625 21.532297564437066 38 24.146955987284223 28.225041619348822 26.62742847374012 21.00057391962683 39 23.764071545933245 27.146941062660357 26.107237492826002 22.981749898580397 40 26.14794101245935 25.45408168110963 26.91913703111241 21.478840275318607 41 22.222357900621002 25.42708167975285 28.028307941121 24.32225247850515 42 22.85217702774759 25.773604310231374 27.129709906015577 24.244508756005466 43 23.253785088129906 25.857589239074834 27.493735049936436 23.394890622858824 44 22.88921723061393 26.19230784885969 28.51444364394189 22.404031276584487 45 22.33130765483958 26.94762949485575 26.64126767041546 24.079795179889203 46 22.98826246172173 27.23689584105004 27.217493830024814 22.55734786720341 47 22.57417198865186 27.15168980661758 28.714297925341604 21.559840279388958 48 23.34889564567315 26.79309179864783 28.76042858092606 21.097583974752965 49 23.473584094149956 26.445755097776637 27.904569241435638 22.17609156663777 50 22.085594074652967 27.209353126098147 28.741433605097168 21.96361919415172 51 22.13213176543376 27.41164961867586 27.37311695342296 23.08310166246742 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 766.0 1 1070.0 2 1374.0 3 6022.5 4 10671.0 5 7126.0 6 3581.0 7 3584.0 8 3587.0 9 3754.5 10 3922.0 11 3982.5 12 4043.0 13 3997.0 14 3951.0 15 3656.5 16 3362.0 17 3339.0 18 3316.0 19 3331.0 20 3346.0 21 3845.0 22 4344.0 23 4378.5 24 4413.0 25 4685.5 26 5968.5 27 6979.0 28 8482.5 29 9986.0 30 12005.0 31 14024.0 32 15419.5 33 16815.0 34 18940.5 35 21066.0 36 21915.0 37 22764.0 38 24702.0 39 26640.0 40 29740.0 41 32840.0 42 36051.0 43 39262.0 44 40180.5 45 41099.0 46 42856.5 47 44614.0 48 45591.0 49 46568.0 50 47102.0 51 47636.0 52 45967.0 53 44298.0 54 43595.0 55 42892.0 56 41958.5 57 41025.0 58 40238.0 59 39451.0 60 36912.0 61 34373.0 62 31910.5 63 29448.0 64 27492.5 65 25537.0 66 21840.5 67 18144.0 68 15465.0 69 12786.0 70 10837.0 71 8888.0 72 7302.0 73 5716.0 74 4897.0 75 3275.0 76 2472.0 77 1808.5 78 1145.0 79 808.0 80 471.0 81 334.5 82 198.0 83 163.5 84 129.0 85 78.5 86 28.0 87 24.0 88 20.0 89 11.0 90 2.0 91 3.5 92 5.0 93 4.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 737037.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.420235537254143 #Duplication Level Percentage of deduplicated Percentage of total 1 70.50569828126237 17.92271457028264 2 5.21212095393121 2.6498668459517822 3 2.67505066332923 2.0400125380775087 4 1.971529034032762 2.004669296545918 5 1.598222661454455 2.031359824757472 6 1.3786031394807792 2.1026649910799655 7 1.2601087317336717 2.2422582534254367 8 1.234066237372845 2.5096203538072563 9 1.1229258080419646 2.569053467815936 >10 12.939279934374998 60.28018546451318 >50 0.07183701763398123 1.222133547154092 >100 0.028413148765611587 1.2175001238017962 >500 0.00160829143956292 0.25565594719634765 >1k 0.0 0.0 >5k 5.360971465209733E-4 0.9523047755906596 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6988 0.9481206506593293 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03242713730789635 0.0 2 0.0 0.0 0.0 0.10528643745157977 0.0 3 0.0 0.0 0.0 0.15575880179692472 0.0 4 0.0 0.0 0.0 0.20188945738137976 0.0 5 0.0 0.0 0.0 0.33553268017752164 0.0 6 0.0 0.0 0.0 0.47392464693088676 0.0 7 0.0 0.0 0.0 0.5494975150501263 0.0 8 0.0 0.0 0.0 0.6835477730426016 0.0 9 0.0 0.0 0.0 0.7526080780205064 0.0 10 0.0 0.0 0.0 0.8703769281596446 0.0 11 0.0 0.0 0.0 1.0511005553316861 0.0 12 0.0 0.0 0.0 1.1814874965571607 0.0 13 0.0 0.0 0.0 1.2500050879399542 0.0 14 0.0 0.0 0.0 1.286366898812407 0.0 15 0.0 0.0 0.0 1.3396885095320858 0.0 16 0.0 0.0 0.0 1.4244875087682165 0.0 17 0.0 0.0 0.0 1.522175955888239 0.0 18 0.0 0.0 0.0 1.6273267149410409 0.0 19 0.0 0.0 0.0 1.6955729495262788 0.0 20 1.3567839877780898E-4 0.0 0.0 1.7701960688540739 0.0 21 1.3567839877780898E-4 0.0 0.0 1.8564875304767603 0.0 22 1.3567839877780898E-4 0.0 0.0 1.9567538671735611 0.0 23 1.3567839877780898E-4 0.0 0.0 2.064211159005586 0.0 24 1.3567839877780898E-4 0.0 0.0 2.15063829902705 0.0 25 1.3567839877780898E-4 0.0 0.0 2.230824232704735 0.0 26 1.3567839877780898E-4 0.0 0.0 2.307075492817864 0.0 27 1.3567839877780898E-4 0.0 0.0 2.387261426495549 0.0 28 1.3567839877780898E-4 0.0 0.0 2.4689398225597903 0.0 29 1.3567839877780898E-4 0.0 0.0 2.550618218624031 0.0 30 1.3567839877780898E-4 0.0 0.0 2.6616031488242786 0.0 31 2.7135679755561795E-4 0.0 0.0 2.756713706367523 0.0 32 2.7135679755561795E-4 0.0 0.0 2.8523669775058784 0.0 33 2.7135679755561795E-4 0.0 0.0 2.942728791091899 0.0 34 2.7135679755561795E-4 0.0 0.0 3.041638343800922 0.0 35 2.7135679755561795E-4 0.0 0.0 3.157372017958393 0.0 36 2.7135679755561795E-4 0.0 0.0 3.254517751483304 0.0 37 2.7135679755561795E-4 0.0 0.0 3.3579046913519943 0.0 38 2.7135679755561795E-4 0.0 0.0 3.4838142454178014 0.0 39 2.7135679755561795E-4 0.0 0.0 3.6812263156395133 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGATA 35 1.2111377E-7 45.0 9 TACGCGG 25 3.8894388E-5 45.0 2 TGCGACG 20 7.0316374E-4 45.0 1 TATTACG 20 7.0316374E-4 45.0 1 TTCGGTA 20 7.0316374E-4 45.0 25 ACCCGTT 20 7.0316374E-4 45.0 25 TACGAAT 90 0.0 42.5 12 CGTTTTT 3225 0.0 41.651165 1 CGTTAGG 105 0.0 40.714287 2 TACGGGT 45 1.9266736E-8 40.0 4 ACACGAC 385 0.0 39.15584 26 GGCGATA 190 0.0 39.078945 8 AATCGTT 75 0.0 39.0 22 CATACGA 290 0.0 38.793106 18 CTAGGGA 530 0.0 38.632076 4 GCGAGAC 405 0.0 38.333336 21 TAACGGG 100 0.0 38.25 3 ATTGGGC 195 0.0 38.076923 4 TAAGGGA 790 0.0 37.87975 4 CGATTGA 30 1.1395244E-4 37.500004 10 >>END_MODULE