SRR1547729_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547729_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1056018
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6279	0.5945921376340176	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCGT	25	3.8905888E-5	45.000004	21
CGACGGT	65	0.0	45.000004	28
ACCGCAC	25	3.8905888E-5	45.000004	10
CGCGATA	20	7.0330244E-4	45.000004	36
CCCGTAA	20	7.0330244E-4	45.000004	24
CCGTAAA	20	7.0330244E-4	45.000004	28
CATAGCG	20	7.0330244E-4	45.000004	24
CGTACGA	20	7.0330244E-4	45.000004	38
CGCGTCA	20	7.0330244E-4	45.000004	35
CAATCGA	20	7.0330244E-4	45.000004	13
GTGCGTA	20	7.0330244E-4	45.000004	33
CGATAGT	20	7.0330244E-4	45.000004	12
ATCGATA	20	7.0330244E-4	45.000004	10
ACGCGTC	20	7.0330244E-4	45.000004	11
GTCTACG	35	1.2118107E-7	45.0	1
GTTGCGC	35	1.2118107E-7	45.0	42
TCCGCGC	30	2.165334E-6	44.999996	31
ACGTACG	30	2.165334E-6	44.999996	37
TGTAGCG	100	0.0	42.750004	1
CATACGA	245	0.0	42.2449	18