##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547727_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1955014 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61972701985766 31.0 31.0 33.0 30.0 34.0 2 32.001900242146604 33.0 31.0 34.0 30.0 34.0 3 32.039766467145505 33.0 31.0 34.0 30.0 34.0 4 35.75046521405985 37.0 35.0 37.0 35.0 37.0 5 35.684026303647954 37.0 35.0 37.0 33.0 37.0 6 35.74550105523541 37.0 35.0 37.0 33.0 37.0 7 36.11330609397171 37.0 35.0 37.0 35.0 37.0 8 36.01255745483152 37.0 35.0 37.0 35.0 37.0 9 37.813900565417946 39.0 38.0 39.0 35.0 39.0 10 37.42688134202619 39.0 37.0 39.0 35.0 39.0 11 37.091014181995625 39.0 37.0 39.0 33.0 39.0 12 36.39619869729833 38.0 35.0 39.0 33.0 39.0 13 36.137787760087654 38.0 35.0 39.0 32.0 39.0 14 37.06151055695765 39.0 35.0 41.0 32.0 41.0 15 37.316813588035686 39.0 35.0 41.0 32.0 41.0 16 37.448230038250365 39.0 35.0 41.0 33.0 41.0 17 37.3618025241763 39.0 35.0 41.0 33.0 41.0 18 37.26329478970483 39.0 35.0 41.0 32.0 41.0 19 37.20676117920383 39.0 35.0 41.0 32.0 41.0 20 37.07857130434871 39.0 35.0 41.0 32.0 41.0 21 36.934749316373185 38.0 35.0 41.0 32.0 41.0 22 36.90980320345532 38.0 35.0 41.0 32.0 41.0 23 36.831774094712365 38.0 35.0 41.0 32.0 41.0 24 36.81243766029297 38.0 35.0 41.0 32.0 41.0 25 36.72433752392566 38.0 35.0 41.0 32.0 41.0 26 36.68281557063018 38.0 35.0 41.0 32.0 41.0 27 36.58500348335102 38.0 35.0 41.0 31.0 41.0 28 36.584321135296214 38.0 35.0 40.0 31.0 41.0 29 36.513466399729104 38.0 35.0 40.0 31.0 41.0 30 36.49523942028036 38.0 35.0 40.0 31.0 41.0 31 36.32776133572445 38.0 35.0 41.0 31.0 41.0 32 36.12377814174221 38.0 35.0 41.0 30.0 41.0 33 36.00569714590279 38.0 35.0 41.0 30.0 41.0 34 35.80079324240133 38.0 35.0 41.0 29.0 41.0 35 35.685637545306584 38.0 35.0 41.0 29.0 41.0 36 35.5869533415106 38.0 35.0 40.0 29.0 41.0 37 35.31461513830592 38.0 34.0 40.0 27.0 41.0 38 35.421498771875804 38.0 34.0 40.0 28.0 41.0 39 35.33942212178532 38.0 35.0 40.0 27.0 41.0 40 35.207613858519686 38.0 34.0 40.0 27.0 41.0 41 35.14124502433231 37.0 34.0 40.0 26.0 41.0 42 35.16549600156316 37.0 34.0 40.0 27.0 41.0 43 35.07844496254247 37.0 34.0 40.0 26.0 41.0 44 34.941871516009606 37.0 34.0 40.0 26.0 41.0 45 34.9371186088693 37.0 34.0 40.0 26.0 41.0 46 34.7758860038854 37.0 34.0 40.0 25.0 41.0 47 34.67406422665004 36.0 34.0 40.0 24.0 41.0 48 34.526264773551496 36.0 34.0 40.0 24.0 41.0 49 34.60105298478681 36.0 34.0 40.0 25.0 41.0 50 34.474435988693685 36.0 34.0 40.0 24.0 41.0 51 33.87176562418479 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 1.0 12 4.0 13 9.0 14 12.0 15 39.0 16 136.0 17 333.0 18 793.0 19 1518.0 20 2764.0 21 4477.0 22 6774.0 23 9913.0 24 14497.0 25 21207.0 26 28628.0 27 33915.0 28 35681.0 29 38058.0 30 44027.0 31 53303.0 32 66860.0 33 88517.0 34 160034.0 35 267949.0 36 124295.0 37 162489.0 38 261304.0 39 527324.0 40 151.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.66811797767177 24.272102399266707 29.759070779032786 15.300708844028737 2 31.735936417846624 24.880895993583678 30.32980837988884 13.05335920868086 3 28.498465995639926 24.491333565897737 33.14641225075626 13.863788187706072 4 25.844725408616 26.949883734847933 32.38135379081684 14.824037065719223 5 23.46637926889526 31.070774940742112 31.16494306434634 14.297902726016284 6 22.575592809054054 39.9982813422308 27.311773726428555 10.114352122286592 7 87.54546003251129 3.50145830157738 7.479690682521967 1.4733909833893772 8 88.63184611465698 2.5988560695729035 7.161994747863698 1.6073030679064193 9 84.67954705183696 4.674237626942825 8.256462613566962 2.3897527076532445 10 46.0202842537189 33.38983761753113 12.92302766118299 7.6668504675669835 11 38.83854540172091 19.44952823867246 26.480935686394062 15.230990673212572 12 36.40521244349145 19.7069176998221 28.34409369958476 15.543776157101687 13 25.28733809578857 30.81788672613086 27.813100059641517 16.081675118439048 14 16.503308927711004 35.48997603086218 31.157526237663767 16.84918880376304 15 15.531090825948048 26.350552988367347 43.03457673448886 15.083779451195745 16 20.91018274037935 22.737893437080245 40.25024884732284 16.10167497521757 17 21.08030939931888 22.087821365985103 29.37457225370253 27.457296980993483 18 22.41012084823945 25.037365461321503 33.48482414959688 19.06768954084216 19 26.78625319307176 25.78820407424192 27.970950591658166 19.454592141028147 20 27.891923024592153 26.621497339660994 27.83396947541041 17.652610160336447 21 24.385298519601395 25.769227228040307 31.929183115824234 17.91629113653406 22 23.517222894567507 21.70628957132788 31.180288222999934 23.596199311104677 23 19.630805712900266 26.68216186687154 30.906428291562104 22.780604128666088 24 20.153001461882113 24.72202245099012 36.830477940311425 18.29449814681634 25 19.675050920351467 26.10446779409252 34.37627556631308 19.84420571924293 26 18.985081436756975 32.030410012409114 27.881079112476943 21.10342943835696 27 18.468716848063494 31.182641147326823 32.52897421706443 17.819667787545253 28 16.058708530987502 28.680715329915795 37.16484894737327 18.095727191723434 29 17.82432248567018 25.627847166311852 36.47733468916335 20.070495658854618 30 20.31330721928334 27.50195139267545 33.730960494400556 18.45378089364066 31 26.632545853891582 25.569689015014724 29.00915287563158 18.78861225546211 32 27.371977898879496 26.324568519713925 28.96598182928613 17.337471752120447 33 25.60181154712959 26.658069967785398 28.60874653583043 19.131371949254582 34 20.27550697846665 27.314638156043898 30.472569505896118 21.937285359593332 35 19.589220332949022 27.32563551974564 31.34662974280491 21.738514404500428 36 27.362924255273875 24.917468621708082 29.257028338415992 18.462578784602055 37 20.942049519849988 30.188377167631536 30.049708083931883 18.8198652285866 38 20.65422549403738 30.42320924556039 26.813056070186708 22.10950919021552 39 20.435403531637114 28.798412696788873 29.482244116921922 21.28393965465209 40 23.573693078412738 25.682578232176347 28.327674379825414 22.416054309585505 41 18.923547350556056 24.877878112381804 29.61702576042934 26.5815487766328 42 21.21621635446089 26.289888461156803 28.57938613227322 23.91450905210909 43 21.873756402767448 25.22406489160691 29.13263025226418 23.76954845336146 44 20.16092979385314 28.24654964107674 30.464590023396255 21.12793054167387 45 19.507686389969585 32.390560886009 26.37756046759768 21.724192256423738 46 22.645362130399064 29.54127182720942 28.007676671369104 19.805689371022407 47 21.39452709801567 27.736527717960076 28.744755792030137 22.124189391994122 48 21.328696367391743 26.393468282068568 31.160186065163725 21.11764928537596 49 21.807567618441606 24.800845415940756 31.416092160976856 21.975494804640785 50 20.100776771931045 29.37774358649094 29.12833360784117 21.393146033736844 51 18.969787428632227 30.922182654446463 28.124606780309502 21.98342313661181 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1865.0 1 2731.5 2 3598.0 3 14167.5 4 24737.0 5 17026.5 6 9316.0 7 9606.5 8 9897.0 9 10304.5 10 10712.0 11 10709.5 12 10707.0 13 10399.0 14 10091.0 15 9632.0 16 9173.0 17 8418.0 18 7663.0 19 7890.0 20 8117.0 21 8916.0 22 9715.0 23 11064.5 24 12414.0 25 13911.0 26 18377.0 27 21346.0 28 25393.0 29 29440.0 30 32991.5 31 36543.0 32 42138.0 33 47733.0 34 51859.5 35 55986.0 36 61573.0 37 67160.0 38 76653.5 39 86147.0 40 105719.5 41 125292.0 42 144611.0 43 163930.0 44 169744.0 45 175558.0 46 171614.0 47 167670.0 48 162737.0 49 157804.0 50 145905.5 51 134007.0 52 126951.0 53 119895.0 54 110173.0 55 100451.0 56 92198.0 57 83945.0 58 79230.5 59 74516.0 60 64321.0 61 54126.0 62 46877.5 63 39629.0 64 33574.5 65 27520.0 66 21977.0 67 16434.0 68 13701.0 69 10968.0 70 9163.5 71 7359.0 72 5474.0 73 3589.0 74 2978.5 75 1790.0 76 1212.0 77 870.0 78 528.0 79 381.5 80 235.0 81 169.5 82 104.0 83 78.0 84 52.0 85 41.5 86 31.0 87 21.0 88 11.0 89 7.5 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1955014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.2820305404997 #Duplication Level Percentage of deduplicated Percentage of total 1 81.4937809633952 17.343531353237694 2 6.143467968008686 2.61490945839485 3 1.9555695218461642 1.248554708640014 4 1.05885006604649 0.901379177736461 5 0.6861627508176721 0.7301468309327491 6 0.5146558019994405 0.6571752297598475 7 0.40149095132503254 0.5981179881483536 8 0.31318922581691244 0.5332242135032791 9 0.28749916035504974 0.5506709319939771 >10 4.3147135536056185 23.824927656653365 >50 2.2771585240580894 34.53675470408482 >100 0.5500823321272134 14.96855985819588 >500 0.002172330384744766 0.32598415967117833 >1k 9.654801709976738E-4 0.3701096549686164 >5k 0.0 0.0 >10k+ 2.4137004274941845E-4 0.7959540740789328 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15495 0.7925774444581982 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2690 0.1375949225939047 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0230105769063547E-4 0.0 0.0 0.023733845384227428 0.0 2 1.0230105769063547E-4 0.0 0.0 0.11094549706549416 0.0 3 1.0230105769063547E-4 0.0 0.0 0.16951285259338297 0.0 4 1.0230105769063547E-4 0.0 0.0 0.25114909663051005 0.0 5 1.0230105769063547E-4 0.0 0.0 0.48147992802097583 0.0 6 1.0230105769063547E-4 0.0 0.0 0.7113504046518337 0.0 7 1.0230105769063547E-4 0.0 0.0 0.8727814736876565 0.0 8 1.0230105769063547E-4 0.0 0.0 1.1431120186351607 0.0 9 1.0230105769063547E-4 0.0 0.0 1.2669985994985202 0.0 10 1.0230105769063547E-4 0.0 0.0 1.4634677807933856 0.0 11 1.0230105769063547E-4 0.0 0.0 1.7559465047309124 0.0 12 1.0230105769063547E-4 0.0 0.0 1.9723132417466065 0.0 13 1.0230105769063547E-4 0.0 0.0 2.0544609910721867 0.0 14 1.0230105769063547E-4 0.0 0.0 2.09921770381184 0.0 15 1.0230105769063547E-4 0.0 0.0 2.1542556728494016 0.0 16 1.0230105769063547E-4 0.0 0.0 2.2653546215014315 0.0 17 1.0230105769063547E-4 0.0 0.0 2.400954673470369 0.0 18 1.0230105769063547E-4 0.0 0.0 2.562283441448501 0.0 19 1.0230105769063547E-4 0.0 0.0 2.6614643168795724 5.1150528845317734E-5 20 1.0230105769063547E-4 0.0 0.0 2.771693706541232 5.1150528845317734E-5 21 1.0230105769063547E-4 0.0 0.0 2.9132783703850715 5.1150528845317734E-5 22 1.0230105769063547E-4 0.0 0.0 3.0662184516325715 5.1150528845317734E-5 23 1.0230105769063547E-4 0.0 0.0 3.226984563793405 5.1150528845317734E-5 24 1.0230105769063547E-4 0.0 0.0 3.3450399843683982 5.1150528845317734E-5 25 1.0230105769063547E-4 0.0 0.0 3.44672723571289 5.1150528845317734E-5 26 1.0230105769063547E-4 0.0 0.0 3.550460508211194 5.1150528845317734E-5 27 1.0230105769063547E-4 0.0 0.0 3.6687716814304143 5.1150528845317734E-5 28 1.0230105769063547E-4 0.0 0.0 3.778489565803621 5.1150528845317734E-5 29 1.0230105769063547E-4 0.0 0.0 3.912248198734127 5.1150528845317734E-5 30 1.0230105769063547E-4 0.0 0.0 4.069382623346943 5.1150528845317734E-5 31 1.534515865359532E-4 0.0 0.0 4.212143749354224 5.1150528845317734E-5 32 1.534515865359532E-4 0.0 0.0 4.334905018582987 5.1150528845317734E-5 33 1.534515865359532E-4 0.0 0.0 4.462320985936674 5.1150528845317734E-5 34 1.534515865359532E-4 0.0 0.0 4.600018209588269 5.1150528845317734E-5 35 1.534515865359532E-4 0.0 0.0 4.773674255018123 5.1150528845317734E-5 36 1.534515865359532E-4 0.0 0.0 4.910808822852419 5.1150528845317734E-5 37 1.534515865359532E-4 0.0 0.0 5.055922873186586 5.1150528845317734E-5 38 1.534515865359532E-4 0.0 0.0 5.218939608616614 5.1150528845317734E-5 39 1.534515865359532E-4 0.0 0.0 5.487940239814139 5.1150528845317734E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGT 30 2.1662854E-6 45.000004 31 ATCTCGC 45 3.8562575E-10 45.0 35 TATAGCG 105 0.0 45.0 1 CGACTAT 20 7.0345023E-4 45.0 16 CGTTTTT 8385 0.0 42.397137 1 TACGCGG 135 0.0 41.666664 2 ATACCGG 50 1.0822987E-9 40.5 2 TAGGGAC 1885 0.0 39.986736 5 ACGGGAT 620 0.0 39.919353 5 CGACGGT 340 0.0 39.705883 28 TACGGGA 645 0.0 39.418606 4 CGACCGG 40 3.4598816E-7 39.375 2 TACGGGT 80 0.0 39.375 4 CTCACGA 385 0.0 39.15584 24 CACGACG 350 0.0 38.571426 26 TACGACT 35 6.2505387E-6 38.571426 14 ATAGCGG 310 0.0 38.46774 2 GCGCGAC 205 0.0 38.414635 9 CGGTCTA 335 0.0 38.28358 31 TTAGGGA 2700 0.0 38.166668 4 >>END_MODULE