##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547726_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1860270 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61481612884151 31.0 31.0 33.0 30.0 34.0 2 31.99483838367549 33.0 31.0 34.0 30.0 34.0 3 32.05592521515694 33.0 31.0 34.0 30.0 34.0 4 35.762894633574696 37.0 35.0 37.0 35.0 37.0 5 35.69626344562886 37.0 35.0 37.0 33.0 37.0 6 35.75110172179307 37.0 35.0 37.0 33.0 37.0 7 36.10553199266773 37.0 35.0 37.0 35.0 37.0 8 35.99414493595016 37.0 35.0 37.0 35.0 37.0 9 37.784388287721676 39.0 38.0 39.0 35.0 39.0 10 37.404756298816835 39.0 37.0 39.0 35.0 39.0 11 37.08118552683213 39.0 37.0 39.0 33.0 39.0 12 36.4660893311186 39.0 35.0 39.0 33.0 39.0 13 36.25308799260323 39.0 35.0 39.0 32.0 39.0 14 37.259739715202635 39.0 35.0 41.0 32.0 41.0 15 37.45004488595742 39.0 35.0 41.0 33.0 41.0 16 37.566713434071396 39.0 35.0 41.0 33.0 41.0 17 37.448804205841085 39.0 35.0 41.0 33.0 41.0 18 37.35182849801373 39.0 35.0 41.0 32.0 41.0 19 37.32378740720433 39.0 35.0 41.0 32.0 41.0 20 37.2227300338123 39.0 35.0 41.0 32.0 41.0 21 37.08443881802104 39.0 35.0 41.0 32.0 41.0 22 37.03796169373263 39.0 35.0 41.0 32.0 41.0 23 36.95789912217044 38.0 35.0 41.0 32.0 41.0 24 36.96452719228929 38.0 35.0 41.0 32.0 41.0 25 36.88054207184979 38.0 35.0 41.0 32.0 41.0 26 36.848697769678594 38.0 35.0 41.0 32.0 41.0 27 36.7468684653303 38.0 35.0 41.0 32.0 41.0 28 36.74672816311611 38.0 35.0 41.0 32.0 41.0 29 36.67876491046999 38.0 35.0 41.0 31.0 41.0 30 36.69149693324087 38.0 35.0 41.0 31.0 41.0 31 36.55587307218845 38.0 35.0 41.0 31.0 41.0 32 36.37272331435759 38.0 35.0 41.0 31.0 41.0 33 36.28098555586017 38.0 35.0 41.0 30.0 41.0 34 36.10724787262064 38.0 35.0 41.0 30.0 41.0 35 36.002425991925904 38.0 35.0 41.0 30.0 41.0 36 35.91698516881958 38.0 35.0 41.0 30.0 41.0 37 35.66332091578104 38.0 35.0 41.0 29.0 41.0 38 35.776996887548584 38.0 35.0 41.0 29.0 41.0 39 35.700080095900056 38.0 35.0 40.0 29.0 41.0 40 35.59053793266569 38.0 35.0 40.0 28.0 41.0 41 35.53872502378687 38.0 35.0 40.0 28.0 41.0 42 35.55958059851527 38.0 35.0 40.0 29.0 41.0 43 35.47075424535148 38.0 35.0 40.0 28.0 41.0 44 35.34560950829718 38.0 34.0 40.0 27.0 41.0 45 35.33552817601746 38.0 34.0 40.0 28.0 41.0 46 35.14408338574508 37.0 34.0 40.0 27.0 41.0 47 35.041712762125925 37.0 34.0 40.0 27.0 41.0 48 34.91797319743908 37.0 34.0 40.0 26.0 41.0 49 34.977507566106 37.0 34.0 40.0 27.0 41.0 50 34.83001177248464 37.0 34.0 40.0 26.0 41.0 51 34.232598493767036 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 3.0 12 8.0 13 15.0 14 19.0 15 61.0 16 123.0 17 326.0 18 680.0 19 1369.0 20 2303.0 21 3642.0 22 5901.0 23 8697.0 24 12589.0 25 18250.0 26 24656.0 27 28286.0 28 30914.0 29 34120.0 30 39724.0 31 48559.0 32 60986.0 33 81263.0 34 146081.0 35 242447.0 36 118753.0 37 157534.0 38 258332.0 39 534472.0 40 153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.8773242593817 23.513575986281563 29.453412676654466 14.155687077682272 2 30.985502104533214 24.843221682873992 30.60442838942734 13.566847823165453 3 29.359555333365588 24.446505077219975 32.54941486988448 13.64452471952996 4 26.873142070774676 26.69687733501051 31.082100985340837 15.34787960887398 5 24.02489961134674 31.60729356491262 29.945975584189394 14.421831239551247 6 22.43298015879415 40.54836125938708 26.56205819585329 10.456600385965478 7 87.41075220263725 3.8134786885774643 6.684567293994957 2.091201814790326 8 88.20380912448194 3.4036457073435575 6.66392512914792 1.728620039026593 9 84.54003988668312 5.381584393663285 7.450746397028388 2.6276293226252103 10 46.06954904395599 33.25952684287765 12.133292479048741 8.537631634117627 11 36.58796841318733 23.270439237315014 25.736049068146023 14.405543281351632 12 35.00857402420079 22.055830605234725 27.191536712412713 15.744058658151774 13 24.79860450364732 31.86032135120171 27.05892155439802 16.282152590752954 14 16.681556978288096 35.98230364409468 29.538239072822766 17.797900304794464 15 15.613271191816242 28.61514726356927 40.571099894101394 15.200481650513098 16 21.32464642229354 25.31578749321335 37.89939094862574 15.460175135867374 17 20.91051299004983 24.984168964720173 28.581066189316605 25.524251855913388 18 22.33229584952722 27.126653657802365 32.4507732748472 18.09027721782322 19 25.937955243056116 28.09113730802518 27.515898229826853 18.455009219091853 20 27.924172297569704 28.362442011105916 27.118805334709478 16.594580356614898 21 24.6021276481371 27.34807312916942 30.873152821902195 17.17664640079128 22 24.067312809430888 23.367898208324597 30.139173345804643 22.425615636439872 23 19.862116789498298 27.822036586086966 30.6669461959823 21.648900428432434 24 20.17105043891478 27.06897385863342 35.366049014390384 17.39392668806141 25 18.890429883834067 28.63998236815086 33.326452611717656 19.143135136297417 26 18.446032027608897 33.78138657291683 27.779999677466172 19.992581722008097 27 17.697377262440398 33.41160154171169 31.022324716304624 17.868696479543292 28 16.33241411192999 30.288345240207065 35.36475887908745 18.0144817687755 29 17.062523182118724 27.177614002268484 35.64729851043128 20.112564305181508 30 19.233122073677478 30.1464841125213 32.439753369134586 18.180640444666636 31 25.575373467292383 27.896004343455523 28.16564262176996 18.362979567482142 32 25.963757949114914 27.646793207437632 29.021539883995334 17.367908959452123 33 25.16543297478323 28.279658329167273 27.63985873018433 18.91504996586517 34 20.295709762561348 28.869250162610804 29.574040327479345 21.260999747348503 35 19.700849876630812 28.46011600466599 31.213909808791197 20.625124309912003 36 25.64616964204121 27.377477462948928 29.04067689098894 17.935676004020923 37 20.411714428550695 31.07091981271536 29.806855994022374 18.710509764711574 38 20.12535814693566 32.0799131308896 26.826320910405478 20.96840781176926 39 19.957855580103963 31.443930182177855 29.036430195616763 19.561784042101415 40 22.71922892913394 27.480849554096988 27.781343568406736 22.018577948362335 41 18.800012901353032 26.516473415149417 29.83072349712676 24.852790186370797 42 21.01194987824348 26.829062447924223 27.816177221586113 24.34281045224618 43 20.982706811376843 27.041773505996442 28.368838931982992 23.606680750643726 44 19.578985846140615 30.1335827594919 29.10185080660334 21.185580587764143 45 18.930209055674712 34.13267966477984 25.939836690372903 20.99727458917254 46 21.40635499147973 31.814575303584963 27.107355383895886 19.671714321039417 47 20.296032296387086 29.500717637762257 28.474683782461685 21.728566283388968 48 21.558322179038527 27.927505147102305 30.313072833513417 20.20109984034576 49 21.634010116811 26.552597203631727 30.742634133754777 21.07075854580249 50 19.751111397807843 30.48874625726373 29.539905497589057 20.220236847339365 51 18.801840593032193 32.18097372961989 27.404194014847306 21.612991662500605 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1781.0 1 2443.5 2 3106.0 3 11136.0 4 19166.0 5 13439.0 6 7712.0 7 7957.0 8 8202.0 9 8442.5 10 8683.0 11 8813.5 12 8944.0 13 8764.5 14 8585.0 15 8261.0 16 7937.0 17 7854.0 18 7771.0 19 7520.0 20 7269.0 21 7953.5 22 8638.0 23 10975.5 24 13313.0 25 15354.0 26 21204.5 27 25014.0 28 29065.5 29 33117.0 30 38682.0 31 44247.0 32 52050.0 33 59853.0 34 61844.0 35 63835.0 36 71913.5 37 79992.0 38 85837.0 39 91682.0 40 107912.5 41 124143.0 42 144385.5 43 164628.0 44 166152.0 45 167676.0 46 166622.5 47 165569.0 48 154370.5 49 143172.0 50 131830.5 51 120489.0 52 110240.0 53 99991.0 54 90674.5 55 81358.0 56 75535.0 57 69712.0 58 64110.0 59 58508.0 60 51946.0 61 45384.0 62 40183.0 63 34982.0 64 29036.0 65 23090.0 66 18962.0 67 14834.0 68 11890.0 69 8946.0 70 7174.0 71 5402.0 72 4149.0 73 2896.0 74 2080.5 75 1051.0 76 837.0 77 777.5 78 718.0 79 455.5 80 193.0 81 157.0 82 121.0 83 85.0 84 49.0 85 34.0 86 19.0 87 20.0 88 21.0 89 14.0 90 7.0 91 5.5 92 4.0 93 6.0 94 8.0 95 5.5 96 3.0 97 1.5 98 0.0 99 1.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1860270.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.695910272661386 #Duplication Level Percentage of deduplicated Percentage of total 1 82.30397714157482 16.210517488636313 2 6.298401973666174 2.4810552026896464 3 1.8399010526535382 1.0871557813091797 4 0.9191664375913993 0.7241527872176806 5 0.6366894431433459 0.6270089071851042 6 0.4583028056946452 0.5416014563202419 7 0.3534954978863002 0.48736909257108324 8 0.29765098885242625 0.4690005735205057 9 0.24146733775232987 0.428032711633348 >10 3.603741747430742 18.033334497656135 >50 1.890917598882311 27.18330929158296 >100 1.1538237097113402 30.62386266685487 >500 0.001369036200344668 0.15553074088649593 >1k 8.214217202068009E-4 0.3154297168672381 >5k 0.0 0.0 >10k+ 2.7380724006893363E-4 0.6326390850691692 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11731 0.6306073849494965 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2537 0.1363780526482715 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 1970 0.10589860611631643 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022684879076693167 0.0 2 0.0 0.0 0.0 0.07353771226757407 0.0 3 0.0 0.0 0.0 0.10170566638176179 0.0 4 0.0 0.0 0.0 0.15433243561418503 0.0 5 0.0 0.0 0.0 0.28399103355964456 0.0 6 0.0 0.0 0.0 0.40300601525584995 0.0 7 0.0 0.0 0.0 0.49831476076053477 0.0 8 0.0 0.0 0.0 0.6845780451224822 0.0 9 0.0 0.0 0.0 0.748869787718987 0.0 10 0.0 0.0 0.0 0.879549742779274 0.0 11 0.0 0.0 0.0 1.0500088696802077 0.0 12 0.0 0.0 0.0 1.182355249506792 0.0 13 0.0 0.0 0.0 1.2419702516301396 0.0 14 0.0 0.0 0.0 1.2638487961424953 0.0 15 0.0 0.0 0.0 1.3094335768463718 0.0 16 5.375563762249566E-5 0.0 0.0 1.3825412440129659 0.0 17 5.375563762249566E-5 0.0 0.0 1.474624651260301 0.0 18 5.375563762249566E-5 0.0 0.0 1.5835335730834772 0.0 19 5.375563762249566E-5 0.0 0.0 1.6658872099211406 0.0 20 5.375563762249566E-5 0.0 0.0 1.752165008305246 0.0 21 5.375563762249566E-5 0.0 0.0 1.85865492643541 0.0 22 5.375563762249566E-5 0.0 0.0 1.9756271939019605 0.0 23 5.375563762249566E-5 0.0 0.0 2.097168690566423 0.0 24 5.375563762249566E-5 0.0 0.0 2.1879082068731956 0.0 25 5.375563762249566E-5 0.0 0.0 2.2810129712353584 0.0 26 5.375563762249566E-5 0.0 0.0 2.362076472770082 0.0 27 5.375563762249566E-5 0.0 0.0 2.4471716471264924 0.0 28 5.375563762249566E-5 0.0 0.0 2.53995387766292 0.0 29 5.375563762249566E-5 0.0 0.0 2.645314927403011 0.0 30 5.375563762249566E-5 0.0 0.0 2.7684153375585265 0.0 31 5.375563762249566E-5 0.0 0.0 2.87641041354212 0.0 32 5.375563762249566E-5 0.0 0.0 2.9872007826820837 0.0 33 5.375563762249566E-5 0.0 0.0 3.092400565509308 0.0 34 5.375563762249566E-5 0.0 0.0 3.2137807952609028 0.0 35 5.375563762249566E-5 0.0 0.0 3.346879754014202 0.0 36 5.375563762249566E-5 0.0 0.0 3.4634757320173954 0.0 37 5.375563762249566E-5 0.0 0.0 3.589640213517393 0.0 38 5.375563762249566E-5 0.0 0.0 3.7312863186526686 0.0 39 5.375563762249566E-5 0.0 0.0 3.927279373424288 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 20 7.034412E-4 45.000004 11 ATAGCGC 20 7.034412E-4 45.000004 18 TAGTACG 100 0.0 42.75 1 CGTTTTT 6475 0.0 42.359074 1 TCACGAC 480 0.0 41.718754 25 TAATGCG 110 0.0 40.909092 1 TACGGGA 660 0.0 40.56818 4 CACGACG 495 0.0 40.454544 26 CGACGGT 490 0.0 40.408165 28 CTCACGA 500 0.0 40.05 24 CGATTCG 45 1.929402E-8 40.0 10 GTTGCGA 45 1.929402E-8 40.0 15 GACGGTC 500 0.0 39.6 29 ACGACGG 510 0.0 39.264706 27 CGTTAGG 375 0.0 39.0 2 AGGGCGC 150 0.0 39.0 6 CGGTCTA 505 0.0 38.76238 31 TAGGGAC 1580 0.0 38.734177 5 CGCATCG 105 0.0 38.57143 21 TATCGTT 35 6.250373E-6 38.571426 14 >>END_MODULE