##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547724_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2977702 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60174658176003 31.0 31.0 33.0 30.0 34.0 2 31.990918500239445 31.0 31.0 34.0 30.0 34.0 3 32.0726832302225 33.0 31.0 34.0 30.0 34.0 4 35.78524378866656 37.0 35.0 37.0 35.0 37.0 5 35.71585739607254 37.0 35.0 37.0 33.0 37.0 6 35.77520718997401 37.0 35.0 37.0 33.0 37.0 7 36.123349818081195 37.0 35.0 37.0 35.0 37.0 8 36.0252990393263 37.0 35.0 37.0 35.0 37.0 9 37.82927875254139 39.0 38.0 39.0 35.0 39.0 10 37.332327076383066 39.0 37.0 39.0 34.0 39.0 11 37.10470591079967 39.0 37.0 39.0 33.0 39.0 12 36.562494164963454 39.0 35.0 39.0 33.0 39.0 13 36.36204764613786 39.0 35.0 39.0 32.0 39.0 14 37.35545766500476 39.0 35.0 41.0 33.0 41.0 15 37.54866437272769 40.0 35.0 41.0 33.0 41.0 16 37.647522485460264 40.0 35.0 41.0 33.0 41.0 17 37.56490038291273 39.0 35.0 41.0 33.0 41.0 18 37.464702310708056 39.0 35.0 41.0 33.0 41.0 19 37.44036172860817 39.0 35.0 41.0 33.0 41.0 20 37.3524949776707 39.0 35.0 41.0 33.0 41.0 21 37.208792216279534 39.0 35.0 41.0 32.0 41.0 22 37.170758860356074 39.0 35.0 41.0 32.0 41.0 23 37.08352682706329 39.0 35.0 41.0 32.0 41.0 24 37.0893158549781 39.0 35.0 41.0 32.0 41.0 25 37.020544030262265 39.0 35.0 41.0 32.0 41.0 26 36.99555361819282 39.0 35.0 41.0 32.0 41.0 27 36.8985052903212 39.0 35.0 41.0 32.0 41.0 28 36.9104413403356 39.0 35.0 41.0 32.0 41.0 29 36.84712103494574 38.0 35.0 41.0 32.0 41.0 30 36.85131285803617 39.0 35.0 41.0 32.0 41.0 31 36.72567570562803 39.0 35.0 41.0 31.0 41.0 32 36.55594851331664 39.0 35.0 41.0 31.0 41.0 33 36.48286631771749 39.0 35.0 41.0 31.0 41.0 34 36.308495275887246 39.0 35.0 41.0 30.0 41.0 35 36.217120450602515 38.0 35.0 41.0 30.0 41.0 36 36.13662112595552 38.0 35.0 41.0 30.0 41.0 37 35.873401703729925 38.0 35.0 41.0 29.0 41.0 38 35.99302784496232 38.0 35.0 41.0 30.0 41.0 39 35.9234752167947 38.0 35.0 41.0 30.0 41.0 40 35.81621935304473 38.0 35.0 40.0 29.0 41.0 41 35.77217498594554 38.0 35.0 40.0 29.0 41.0 42 35.778119167062385 38.0 35.0 40.0 29.0 41.0 43 35.67625437333891 38.0 35.0 40.0 29.0 41.0 44 35.537320725848325 38.0 35.0 40.0 28.0 41.0 45 35.52378814266841 38.0 35.0 40.0 28.0 41.0 46 35.34335134946345 38.0 34.0 40.0 27.0 41.0 47 35.23074505104943 38.0 34.0 40.0 27.0 41.0 48 35.09158068873245 37.0 34.0 40.0 27.0 41.0 49 35.16594843943417 37.0 34.0 40.0 27.0 41.0 50 35.02435099281258 37.0 34.0 40.0 27.0 41.0 51 34.41747394467277 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 4.0 11 3.0 12 4.0 13 16.0 14 30.0 15 62.0 16 156.0 17 436.0 18 955.0 19 1875.0 20 3341.0 21 5377.0 22 8384.0 23 12716.0 24 18438.0 25 27031.0 26 36594.0 27 43053.0 28 47198.0 29 51665.0 30 61630.0 31 75941.0 32 95597.0 33 126744.0 34 225377.0 35 372047.0 36 188202.0 37 256766.0 38 430657.0 39 887195.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.09582422955688 23.569148289519905 30.08722833916893 14.247799141754278 2 30.56282999440508 25.169778574215957 31.395351180205406 12.872040251173555 3 29.538583780378293 23.749455116730957 33.2641076910987 13.447853411792046 4 26.247320920629395 27.03175133038833 31.887677141634725 14.833250607347544 5 24.435286002427375 31.422486199089093 30.00323739581731 14.138990402666218 6 22.4699785270655 41.0927621367081 26.10902635656624 10.328232979660154 7 89.53226347028682 3.3176590538609974 5.925341085172391 1.2247363906797928 8 90.83887507883595 2.419013051003761 5.59434758750204 1.147764282658238 9 86.72251286394676 4.263589842099713 7.062090162145171 1.9518071318083543 10 41.92303326524951 29.57965572108962 19.27435989229278 9.222951121368087 11 36.45774493216581 21.740825643398836 25.107146383351996 16.69428304108336 12 34.43692485010253 22.309418471022287 26.6367823240875 16.616874354787686 13 25.525018957571984 30.750592235220314 26.48384559636928 17.240543210838425 14 18.19718695826513 35.08406818412319 29.15207767600653 17.566667181605144 15 17.781564441304067 28.509635954168683 38.89956080225624 14.809238802271013 16 21.882176255380827 25.108590449951002 37.3948098231455 15.61442347152267 17 22.186001151223326 24.210951935418656 28.166283933046355 25.436762980311663 18 23.37755759307009 26.47954697951642 31.727217834423993 18.415677592989493 19 26.017647165498765 27.7311497255266 27.470478912933533 18.780724196041106 20 28.591444006149707 27.71368659456185 26.788073487541737 16.90679591174671 21 25.536369992699072 26.541473928552957 30.781992288012706 17.140163790735272 22 23.92710889135313 22.071651226348372 31.057842591367436 22.94339729093106 23 19.96952683646651 27.152918592928373 30.918943534309346 21.958611036295775 24 20.31919245109148 26.44216916266302 34.97616618452753 18.26247220171797 25 19.539933814733644 27.405663830698973 33.419395224908335 19.635007129659048 26 19.659858508339653 32.81826052439096 27.23758119516325 20.28429977210614 27 18.269994781210478 32.99880243221115 31.152714408627862 17.578488377950514 28 16.547525575091125 29.56971516961738 35.64775790189885 18.23500135339265 29 17.957203239276463 27.148888639628815 34.947049771938225 19.946858349156496 30 19.346227392801563 28.797240287980465 33.43168658247199 18.424845736745986 31 25.627547686101565 27.166015941151933 28.666199639856504 18.540236732889994 32 25.762584704580917 28.0352432849224 28.73494392655813 17.467228083938554 33 24.910182415836104 27.67382363984039 28.11926781121818 19.296726133105327 34 20.287490151801624 28.460101111528285 29.999106693685263 21.253302042984824 35 20.046599693320555 28.07174794522756 30.69534829207221 21.186304069379677 36 25.541709680820983 26.927476288762275 29.38799785875148 18.142816171665263 37 20.63927149190886 30.545601944049473 29.753648954798027 19.06147760924364 38 20.655055475665463 31.40327675502787 26.27865380753346 21.663013961773206 39 20.535399445612757 30.36358238668611 28.50950162239203 20.5915165453091 40 22.84560375752846 27.452276957197196 27.774270225831867 21.927849059442483 41 19.480693501230142 26.87203084794919 28.98473386524239 24.662541785578274 42 21.769102482384067 26.793278843887 27.76013180633925 23.677486867389685 43 22.381621800972695 26.351260132813824 28.02896327436392 23.238154791849556 44 20.138684126215452 29.532773931038097 29.03618293570008 21.292359007046375 45 20.04901766530029 32.7279559875367 26.38598489707835 20.837041450084662 46 22.318855278332084 30.731449957047413 27.1417354725221 19.807959292098403 47 21.699350707357553 29.599704738754916 27.240603660137918 21.46034089374961 48 21.84637683690309 28.319858736703672 29.739040374087132 20.094724052306105 49 21.990615582083095 26.144322030881533 30.499694059378673 21.365368327656697 50 20.48294288683018 30.65031356394965 28.76308643376671 20.103657115453462 51 19.552124423464807 31.605613993609836 27.898560702179065 20.943700880746295 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1952.0 1 3262.5 2 4573.0 3 15274.0 4 25975.0 5 18813.5 6 11652.0 7 11910.0 8 12168.0 9 12443.5 10 12719.0 11 13039.5 12 13360.0 13 12679.0 14 11998.0 15 11568.0 16 11138.0 17 10921.0 18 10704.0 19 11512.5 20 12321.0 21 12306.5 22 12292.0 23 13568.0 24 14844.0 25 18914.5 26 28174.5 27 33364.0 28 38231.5 29 43099.0 30 49287.0 31 55475.0 32 70059.0 33 84643.0 34 92909.0 35 101175.0 36 111588.5 37 122002.0 38 135704.5 39 149407.0 40 171399.5 41 193392.0 42 229334.5 43 265277.0 44 271813.0 45 278349.0 46 269745.0 47 261141.0 48 252036.0 49 242931.0 50 230621.0 51 218311.0 52 200587.0 53 182863.0 54 167272.5 55 151682.0 56 136767.5 57 121853.0 58 108364.0 59 94875.0 60 83222.5 61 71570.0 62 60486.5 63 49403.0 64 41375.5 65 33348.0 66 26519.5 67 19691.0 68 15071.0 69 10451.0 70 8285.5 71 6120.0 72 5197.0 73 4274.0 74 3350.5 75 1805.5 76 1184.0 77 690.5 78 197.0 79 250.0 80 303.0 81 179.0 82 55.0 83 67.5 84 80.0 85 68.5 86 57.0 87 33.5 88 10.0 89 7.0 90 4.0 91 4.5 92 5.0 93 2.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2977702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.718992835624068 #Duplication Level Percentage of deduplicated Percentage of total 1 82.06938814698613 13.721175124535117 2 6.61241676916538 2.211058971796729 3 1.8750750629394846 0.9404809963062776 4 0.9773195598363562 0.6535919487607723 5 0.5899666354188567 0.49318239754125504 6 0.43352282182348145 0.43488389712877895 7 0.327777004994622 0.3836070978731179 8 0.2690134382263318 0.359810699711411 9 0.22439944080847357 0.33765593788754245 >10 3.1277692944816584 13.085515269640702 >50 1.6797411024566815 20.748434044917577 >100 1.806323081909465 45.08331153452004 >500 0.005668165185651487 0.6207512310064577 >1k 0.0014170412964128719 0.44485874163616373 >5k 0.0 0.0 >10k+ 2.0243447091612454E-4 0.48168210673812256 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14232 0.4779524613275607 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4009 0.13463402314939507 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017899709238869438 0.0 2 0.0 0.0 0.0 0.05269163939171885 0.0 3 0.0 0.0 0.0 0.0752257949250798 0.0 4 0.0 0.0 0.0 0.10696167715909785 0.0 5 0.0 0.0 0.0 0.18692266721115813 0.0 6 0.0 0.0 0.0 0.26812622619724874 0.0 7 0.0 0.0 0.0 0.32689637848246733 0.0 8 0.0 0.0 0.0 0.44255603817977757 0.0 9 0.0 0.0 0.0 0.48359439594694165 0.0 10 0.0 0.0 0.0 0.5691301547300569 0.0 11 0.0 0.0 0.0 0.7116225868135898 0.0 12 0.0 0.0 0.0 0.817912605089428 0.0 13 0.0 0.0 0.0 0.8577755598108877 0.0 14 0.0 0.0 0.0 0.8754066054964533 0.0 15 0.0 0.0 0.0 0.9025416243801428 0.0 16 0.0 0.0 0.0 0.9693045173761511 0.0 17 0.0 0.0 0.0 1.0469818672251285 0.0 18 0.0 0.0 0.0 1.141551437988086 0.0 19 0.0 0.0 0.0 1.2008589173799125 0.0 20 0.0 0.0 0.0 1.2657747484469568 0.0 21 3.3582944162982055E-5 0.0 0.0 1.3497321088544119 0.0 22 3.3582944162982055E-5 0.0 0.0 1.441413546419353 0.0 23 3.3582944162982055E-5 0.0 0.0 1.5413899711925505 0.0 24 3.3582944162982055E-5 0.0 0.0 1.6187650745440612 0.0 25 3.3582944162982055E-5 0.0 0.0 1.6880802712964562 0.0 26 3.3582944162982055E-5 0.0 0.0 1.7565558944447766 0.0 27 6.716588832596411E-5 0.0 0.0 1.8314122769840635 0.0 28 6.716588832596411E-5 0.0 0.0 1.9080821385081517 0.0 29 6.716588832596411E-5 0.0 0.0 2.0006367326213303 0.0 30 6.716588832596411E-5 0.0 0.0 2.1070946656179834 3.3582944162982055E-5 31 6.716588832596411E-5 0.0 0.0 2.2038471277515344 3.3582944162982055E-5 32 6.716588832596411E-5 0.0 0.0 2.2937822522200007 3.3582944162982055E-5 33 6.716588832596411E-5 0.0 0.0 2.390467548465226 3.3582944162982055E-5 34 6.716588832596411E-5 0.0 0.0 2.4907798026800534 3.3582944162982055E-5 35 1.0074883248894618E-4 0.0 0.0 2.6104694156769215 3.3582944162982055E-5 36 1.0074883248894618E-4 0.0 0.0 2.7112182481658675 3.3582944162982055E-5 37 1.0074883248894618E-4 0.0 0.0 2.8199262384214405 3.3582944162982055E-5 38 1.0074883248894618E-4 0.0 0.0 2.946063776697601 3.3582944162982055E-5 39 1.0074883248894618E-4 0.0 0.0 3.156393755990358 3.3582944162982055E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAG 25 3.8923063E-5 45.0 28 CCGTAAG 40 6.8212103E-9 45.0 1 CGCAATA 20 7.0350966E-4 45.0 21 CGACTCG 20 7.0350966E-4 45.0 18 CGAATCG 30 2.166671E-6 44.999996 20 CGACGGT 615 0.0 41.707317 28 CGTTTTT 9935 0.0 41.580273 1 CACGACG 620 0.0 41.370968 26 TCGTTAG 185 0.0 41.351353 1 CGTTAGG 485 0.0 41.288662 2 CGGTCTA 630 0.0 40.714287 31 GATACGA 50 1.0822987E-9 40.5 24 ACGGTCT 635 0.0 40.3937 30 CGGGTCA 430 0.0 39.24419 6 TACGGGA 890 0.0 38.932583 4 CCGCTCG 70 0.0 38.571426 19 GTAGGGT 2480 0.0 38.195564 4 CTAGACG 130 0.0 38.076927 1 GGGCGAT 2205 0.0 37.959183 7 CGTAAGG 400 0.0 37.6875 2 >>END_MODULE