SRR1547722_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547722_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1330809
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6829	0.51314651463884	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2790	0.20964691401996832	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAGTTA	20	7.033688E-4	45.000004	27
CAAGTCG	20	7.033688E-4	45.000004	1
ACGTTGT	20	7.033688E-4	45.000004	37
GCGGTAG	20	7.033688E-4	45.000004	41
CTAAGCG	20	7.033688E-4	45.000004	1
TCGATCT	20	7.033688E-4	45.000004	35
ATCCGGC	20	7.033688E-4	45.000004	18
GCCGACC	20	7.033688E-4	45.000004	14
CGTAGCA	20	7.033688E-4	45.000004	37
ACAATCG	20	7.033688E-4	45.000004	44
TTACGCT	20	7.033688E-4	45.000004	42
TAATGCG	40	6.8157533E-9	45.000004	1
TAGTCGT	20	7.033688E-4	45.000004	40
TAGTCGA	20	7.033688E-4	45.000004	31
ATCGATC	20	7.033688E-4	45.000004	34
AGTCGTA	20	7.033688E-4	45.000004	41
CGGACGT	20	7.033688E-4	45.000004	18
GTCGACG	35	1.21212E-7	45.0	1
TTAGACG	25	3.8911392E-5	45.0	1
GAATACG	25	3.8911392E-5	45.0	1