##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547722_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1330809 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.705756423348504 31.0 31.0 33.0 30.0 34.0 2 32.08257533575442 33.0 31.0 34.0 30.0 34.0 3 32.12901250292116 33.0 31.0 34.0 30.0 34.0 4 35.828089530503625 37.0 35.0 37.0 35.0 37.0 5 35.752670743885865 37.0 35.0 37.0 35.0 37.0 6 35.80925587368285 37.0 35.0 37.0 35.0 37.0 7 36.16586602585345 37.0 35.0 37.0 35.0 37.0 8 36.07583732902317 37.0 35.0 37.0 35.0 37.0 9 37.93359302499457 39.0 39.0 39.0 35.0 39.0 10 37.55715433243989 39.0 37.0 39.0 35.0 39.0 11 37.14052204335859 39.0 37.0 39.0 34.0 39.0 12 36.271040397232056 38.0 35.0 39.0 33.0 39.0 13 35.93831496480712 38.0 35.0 39.0 32.0 39.0 14 36.85026927229978 39.0 35.0 41.0 32.0 41.0 15 37.12053645564465 39.0 35.0 41.0 33.0 41.0 16 37.28454421333189 39.0 35.0 41.0 33.0 41.0 17 37.20976413595039 38.0 35.0 41.0 33.0 41.0 18 37.13069343534647 38.0 35.0 41.0 33.0 41.0 19 37.09758274853867 38.0 35.0 41.0 33.0 41.0 20 36.988567856093546 38.0 35.0 41.0 33.0 41.0 21 36.83300608877758 38.0 35.0 41.0 32.0 41.0 22 36.76657581967059 38.0 35.0 41.0 32.0 41.0 23 36.70690835424167 38.0 35.0 41.0 32.0 41.0 24 36.71416108547508 38.0 35.0 41.0 32.0 41.0 25 36.64745203857203 38.0 35.0 40.0 32.0 41.0 26 36.60458638316994 38.0 35.0 40.0 32.0 41.0 27 36.53054570565723 38.0 35.0 40.0 32.0 41.0 28 36.548927006054214 38.0 35.0 40.0 32.0 41.0 29 36.53799831531046 38.0 35.0 40.0 32.0 41.0 30 36.56608423898546 38.0 35.0 40.0 32.0 41.0 31 36.40664287662617 38.0 35.0 40.0 31.0 41.0 32 36.16646941822606 38.0 35.0 40.0 31.0 41.0 33 36.07280909582066 38.0 35.0 40.0 31.0 41.0 34 35.90086781799642 38.0 35.0 40.0 30.0 41.0 35 35.795019420517896 38.0 35.0 40.0 30.0 41.0 36 35.705053843188615 38.0 35.0 40.0 30.0 41.0 37 35.47249304746211 37.0 35.0 40.0 29.0 41.0 38 35.598805688870456 37.0 35.0 40.0 30.0 41.0 39 35.552812612478576 37.0 35.0 40.0 30.0 41.0 40 35.452671269881705 37.0 35.0 40.0 29.0 41.0 41 35.427158217294895 37.0 35.0 40.0 29.0 41.0 42 35.42383016646266 37.0 35.0 40.0 29.0 41.0 43 35.31266395102528 37.0 34.0 40.0 29.0 41.0 44 35.20256700999167 36.0 34.0 40.0 29.0 41.0 45 35.18686227700594 36.0 34.0 40.0 28.0 41.0 46 35.021852121529086 36.0 34.0 40.0 28.0 41.0 47 34.898521876542766 36.0 34.0 40.0 27.0 41.0 48 34.78619847025381 36.0 34.0 40.0 27.0 41.0 49 34.88532013234055 36.0 34.0 40.0 27.0 41.0 50 34.75707708619343 36.0 34.0 40.0 27.0 41.0 51 34.14467290197166 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 2.0 13 4.0 14 12.0 15 36.0 16 89.0 17 175.0 18 384.0 19 767.0 20 1390.0 21 2426.0 22 3739.0 23 5596.0 24 8410.0 25 12628.0 26 17249.0 27 19841.0 28 21372.0 29 23514.0 30 27857.0 31 34590.0 32 44516.0 33 61043.0 34 119899.0 35 227920.0 36 77219.0 37 100395.0 38 167220.0 39 352419.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.191252839438267 23.7898902096394 30.731607616119216 14.287249334803114 2 30.352890610147664 25.311370752677508 31.998431029546687 12.337307607628142 3 27.84847412363457 25.001784628748382 33.33626388159382 13.813477366023225 4 26.285364766844825 27.268601279372174 32.466417044068685 13.979616909714315 5 23.507580727211792 31.730098008053748 31.3498781568204 13.412443107914058 6 21.823266900058535 40.52174278953629 27.026267480908228 10.628722829496946 7 88.53486864005278 3.589621050053013 6.521972724861344 1.3535375850328635 8 90.04432642099655 2.882156643064482 5.809774355298168 1.263742580640798 9 87.78389686273538 3.7792049798280596 6.486205007630696 1.95069314980587 10 54.83927445636452 26.807453210791333 10.743164496182397 7.61010783666176 11 42.81681293108177 20.334773810516758 22.628341106800452 14.220072151601018 12 39.734928152725146 20.84281065126551 24.93956683491019 14.482694361099153 13 23.7544982037242 36.96834031029246 24.565658933776373 14.711502552206964 14 15.20894433386008 41.70425658377724 27.244480612920412 15.84231846944227 15 13.670406497100634 26.58172585247019 45.636676638044975 14.111191012384197 16 18.20952518355376 21.29095910833185 44.83844037724422 15.661075330870169 17 18.594028143783216 21.029163463727702 28.911586861826155 31.46522153066293 18 21.65427195037004 25.207599287350778 34.275767597003025 18.86236116527616 19 27.0257414850666 26.162131455377896 27.312108649701045 19.50001840985446 20 30.317949457811 25.25298521425689 26.95976657807394 17.46929874985817 21 23.43769842253847 27.178505705927748 30.537740577348067 18.846055294185717 22 23.09888195826749 22.49909641428635 29.693517251536473 24.70850437590969 23 17.92488629097038 28.593735088957168 29.700054628425264 23.781323991647184 24 19.735589404640336 25.147786045931458 38.13665221680947 16.979972332618733 25 17.720499335366682 26.27198944401488 36.020420661417226 19.987090559201206 26 16.5483551734321 36.15289647124418 27.04678131873169 20.251967036592028 27 17.49529797288717 34.60000646223463 31.44786366788923 16.456831896988973 28 14.812268327010111 28.89603241336661 39.25484423384572 17.03685502577755 29 15.115317074050447 25.849689925451365 39.11560562034071 19.91938738015748 30 18.03962852670819 30.492504934968128 33.90877278407345 17.559093754250235 31 28.62469370135008 27.28400544330554 26.59667916282502 17.494621692519363 32 28.13724584068788 27.456757506148517 28.510853172769345 15.895143480394255 33 27.20863775342667 28.846062808412025 26.188581531985434 17.75671790617587 34 20.610095062477036 28.492518460575482 28.179100081228786 22.718286395718696 35 18.820807493787616 27.681733441838762 31.12813333844301 22.36932572593062 36 28.19397824932053 24.661540461478694 29.733643220026313 17.410838069174464 37 20.11603468266295 30.84634985185703 31.099654420732055 17.93796104474797 38 19.6773541507459 32.483925191368556 25.372611697095525 22.466108960790017 39 19.4347197832296 30.744982938949168 29.94096072389051 19.87933655393073 40 23.23083177225282 27.35569116229301 26.68910414642522 22.72437291902895 41 17.90076562451862 24.703394702019597 30.288568832942968 27.10727084051881 42 22.314096162559764 24.954970998843564 27.215099988052383 25.515832850544296 43 22.231063961845766 25.65942971530851 27.301513590605413 24.807992732240315 44 19.34176880378777 30.4804070306107 29.260848100666585 20.91697606493494 45 17.83396415263197 36.12486840711176 25.26989222345205 20.771275216804213 46 23.504950748003658 32.09596568703698 26.458793110055613 17.940290454903746 47 21.147061674515278 29.527603134634646 27.138680306490265 22.186654884359815 48 22.414636510573644 26.6300423276368 30.961618083436466 19.993703078353093 49 21.303057012689276 23.720834469860065 32.66479261862521 22.311315898825452 50 20.053140608456964 31.536756965124223 28.62649711566423 19.783605310754588 51 18.685551420226343 33.30598154956872 26.91122467611806 21.097242354086877 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1301.0 1 1677.0 2 2053.0 3 6636.5 4 11220.0 5 8033.5 6 4847.0 7 5150.0 8 5453.0 9 5905.0 10 6357.0 11 6451.5 12 6546.0 13 6337.5 14 6129.0 15 5924.5 16 5720.0 17 5466.5 18 5213.0 19 4746.0 20 4279.0 21 4690.5 22 5102.0 23 5518.0 24 5934.0 25 7259.5 26 10780.0 27 12975.0 28 15107.5 29 17240.0 30 19248.5 31 21257.0 32 26961.5 33 32666.0 34 37011.0 35 41356.0 36 44013.5 37 46671.0 38 52876.0 39 59081.0 40 82227.5 41 105374.0 42 121594.0 43 137814.0 44 141831.0 45 145848.0 46 136434.5 47 127021.0 48 120030.0 49 113039.0 50 102328.5 51 91618.0 52 82336.5 53 73055.0 54 67180.0 55 61305.0 56 56580.5 57 51856.0 58 46320.0 59 40784.0 60 34511.5 61 28239.0 62 23698.5 63 19158.0 64 15567.5 65 11977.0 66 9198.0 67 6419.0 68 5004.0 69 3589.0 70 2622.5 71 1656.0 72 1349.5 73 1043.0 74 839.5 75 425.5 76 215.0 77 124.5 78 34.0 79 61.0 80 88.0 81 55.5 82 23.0 83 16.5 84 10.0 85 8.5 86 7.0 87 5.5 88 4.0 89 3.0 90 2.0 91 3.5 92 5.0 93 4.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1330809.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.01777836819444 #Duplication Level Percentage of deduplicated Percentage of total 1 81.9515097828432 14.765841402061872 2 6.66866074745152 2.4030890272051875 3 2.005502960367493 1.0840412356997797 4 0.9336417954467968 0.6728860378257405 5 0.5943525512692367 0.5354456270670015 6 0.4246023824935359 0.45902349734255116 7 0.314173269793766 0.3962493041048523 8 0.26799709292538626 0.3862969778920015 9 0.23793897542624315 0.3858418551946781 >10 3.181868091689674 14.594002441832727 >50 1.9218823855864622 25.64234721601229 >100 1.492423164835039 37.3764778347305 >500 0.004608830660635999 0.5723027112625997 >1k 4.1898460551236357E-4 0.21062189215441934 >5k 4.1898460551236357E-4 0.5155329396138099 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6829 0.51314651463884 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2790 0.20964691401996832 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.514226308959437E-5 0.0 0.0 0.029305482604941806 0.0 2 7.514226308959437E-5 0.0 0.0 0.1376606259801369 0.0 3 7.514226308959437E-5 0.0 0.0 0.19198848219391362 0.0 4 7.514226308959437E-5 0.0 0.0 0.2809569216919934 0.0 5 7.514226308959437E-5 0.0 0.0 0.49638978996986044 0.0 6 7.514226308959437E-5 0.0 0.0 0.6511077096713352 0.0 7 7.514226308959437E-5 0.0 0.0 0.7656245186198771 0.0 8 7.514226308959437E-5 0.0 0.0 0.9531796072915046 0.0 9 7.514226308959437E-5 0.0 0.0 1.0214839244399458 0.0 10 7.514226308959437E-5 0.0 0.0 1.1951376944399985 0.0 11 7.514226308959437E-5 0.0 0.0 1.4413037483215096 0.0 12 7.514226308959437E-5 0.0 0.0 1.6419335907707266 0.0 13 7.514226308959437E-5 0.0 0.0 1.716549858018694 0.0 14 7.514226308959437E-5 0.0 0.0 1.7447282066772918 0.0 15 7.514226308959437E-5 0.0 0.0 1.7968017949983808 0.0 16 7.514226308959437E-5 0.0 0.0 1.8980184233800643 0.0 17 7.514226308959437E-5 0.0 0.0 2.0248585634753 0.0 18 7.514226308959437E-5 0.0 0.0 2.1828827427527164 0.0 19 7.514226308959437E-5 0.0 0.0 2.2875559152365215 0.0 20 7.514226308959437E-5 0.0 0.0 2.3802063256259913 0.0 21 7.514226308959437E-5 0.0 0.0 2.5149364033456343 0.0 22 7.514226308959437E-5 0.0 0.0 2.6583829835836696 0.0 23 7.514226308959437E-5 0.0 0.0 2.8182857194383266 0.0 24 7.514226308959437E-5 0.0 0.0 2.932877670649958 0.0 25 7.514226308959437E-5 0.0 0.0 3.024926942934711 0.0 26 7.514226308959437E-5 0.0 0.0 3.126068429053305 0.0 27 7.514226308959437E-5 0.0 7.514226308959437E-5 3.2236782288066883 0.0 28 7.514226308959437E-5 0.0 7.514226308959437E-5 3.3254959952930885 0.0 29 7.514226308959437E-5 0.0 7.514226308959437E-5 3.438735385769107 0.0 30 7.514226308959437E-5 0.0 7.514226308959437E-5 3.573690890278019 0.0 31 7.514226308959437E-5 0.0 7.514226308959437E-5 3.698953042848373 0.0 32 7.514226308959437E-5 0.0 7.514226308959437E-5 3.8085104624330013 0.0 33 7.514226308959437E-5 0.0 7.514226308959437E-5 3.916489894492748 0.0 34 7.514226308959437E-5 0.0 7.514226308959437E-5 4.031758126072186 0.0 35 7.514226308959437E-5 0.0 7.514226308959437E-5 4.193238849451724 0.0 36 7.514226308959437E-5 0.0 7.514226308959437E-5 4.321431550282573 0.0 37 7.514226308959437E-5 0.0 7.514226308959437E-5 4.4542830714249755 0.0 38 7.514226308959437E-5 0.0 7.514226308959437E-5 4.595550526033413 0.0 39 7.514226308959437E-5 0.0 7.514226308959437E-5 4.76093864709361 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTA 20 7.033688E-4 45.000004 27 CAAGTCG 20 7.033688E-4 45.000004 1 ACGTTGT 20 7.033688E-4 45.000004 37 GCGGTAG 20 7.033688E-4 45.000004 41 CTAAGCG 20 7.033688E-4 45.000004 1 TCGATCT 20 7.033688E-4 45.000004 35 ATCCGGC 20 7.033688E-4 45.000004 18 GCCGACC 20 7.033688E-4 45.000004 14 CGTAGCA 20 7.033688E-4 45.000004 37 ACAATCG 20 7.033688E-4 45.000004 44 TTACGCT 20 7.033688E-4 45.000004 42 TAATGCG 40 6.8157533E-9 45.000004 1 TAGTCGT 20 7.033688E-4 45.000004 40 TAGTCGA 20 7.033688E-4 45.000004 31 ATCGATC 20 7.033688E-4 45.000004 34 AGTCGTA 20 7.033688E-4 45.000004 41 CGGACGT 20 7.033688E-4 45.000004 18 GTCGACG 35 1.21212E-7 45.0 1 TTAGACG 25 3.8911392E-5 45.0 1 GAATACG 25 3.8911392E-5 45.0 1 >>END_MODULE