##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547721_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1233864 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.605272542192658 31.0 31.0 33.0 30.0 34.0 2 31.97673244377014 31.0 31.0 34.0 30.0 34.0 3 32.03239660124617 33.0 31.0 34.0 30.0 34.0 4 35.74784822314291 37.0 35.0 37.0 35.0 37.0 5 35.69500447375076 37.0 35.0 37.0 33.0 37.0 6 35.748594658730624 37.0 35.0 37.0 33.0 37.0 7 36.06393087082531 37.0 35.0 37.0 35.0 37.0 8 35.91987528609312 37.0 35.0 37.0 35.0 37.0 9 37.63969935098196 39.0 37.0 39.0 35.0 39.0 10 37.355957382661295 39.0 37.0 39.0 34.0 39.0 11 37.10730031834951 39.0 37.0 39.0 33.0 39.0 12 36.57282407137254 39.0 35.0 39.0 33.0 39.0 13 36.379791451894214 39.0 35.0 39.0 32.0 39.0 14 37.411568860101276 40.0 35.0 41.0 33.0 41.0 15 37.58354648486381 40.0 35.0 41.0 33.0 41.0 16 37.642109665246736 40.0 35.0 41.0 33.0 41.0 17 37.533369155757846 39.0 35.0 41.0 33.0 41.0 18 37.41039450052842 39.0 35.0 41.0 32.0 41.0 19 37.38576131567174 39.0 35.0 41.0 32.0 41.0 20 37.297509287895586 39.0 35.0 41.0 32.0 41.0 21 37.16390299092931 39.0 35.0 41.0 32.0 41.0 22 37.10426513781098 39.0 35.0 41.0 32.0 41.0 23 36.99660659521633 39.0 35.0 41.0 32.0 41.0 24 37.00727470774737 39.0 35.0 41.0 32.0 41.0 25 36.92691090752303 39.0 35.0 41.0 32.0 41.0 26 36.87289279855803 39.0 35.0 41.0 32.0 41.0 27 36.77552631408324 38.0 35.0 41.0 31.0 41.0 28 36.767625119137925 38.0 35.0 41.0 31.0 41.0 29 36.67664831780488 38.0 35.0 41.0 31.0 41.0 30 36.66198543761711 38.0 35.0 41.0 31.0 41.0 31 36.539946866105176 38.0 35.0 41.0 31.0 41.0 32 36.35114323782848 38.0 35.0 41.0 30.0 41.0 33 36.25759727166041 38.0 35.0 41.0 30.0 41.0 34 36.073754481855374 38.0 35.0 41.0 30.0 41.0 35 35.97035248617352 38.0 35.0 41.0 30.0 41.0 36 35.88846906952468 38.0 35.0 41.0 29.0 41.0 37 35.63464774075587 38.0 35.0 41.0 27.0 41.0 38 35.745282300156255 38.0 35.0 41.0 29.0 41.0 39 35.66462997542679 38.0 35.0 40.0 28.0 41.0 40 35.56695632581873 38.0 35.0 40.0 27.0 41.0 41 35.50717177906155 38.0 35.0 40.0 27.0 41.0 42 35.51495302561709 38.0 35.0 40.0 27.0 41.0 43 35.4287855063443 38.0 35.0 40.0 27.0 41.0 44 35.2934391472642 38.0 34.0 40.0 27.0 41.0 45 35.26771345950607 38.0 34.0 40.0 27.0 41.0 46 35.07769332762768 38.0 34.0 40.0 26.0 41.0 47 34.97690831404434 37.0 34.0 40.0 26.0 41.0 48 34.85434861540656 37.0 34.0 40.0 25.0 41.0 49 34.913548008532544 37.0 34.0 40.0 26.0 41.0 50 34.78692303203594 37.0 34.0 40.0 26.0 41.0 51 34.17935120888526 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 5.0 12 8.0 13 16.0 14 29.0 15 49.0 16 109.0 17 227.0 18 522.0 19 1020.0 20 1744.0 21 2865.0 22 4391.0 23 6255.0 24 8985.0 25 12696.0 26 16915.0 27 19445.0 28 20984.0 29 22717.0 30 26388.0 31 31878.0 32 39852.0 33 52399.0 34 92840.0 35 149102.0 36 79149.0 37 107388.0 38 176498.0 39 359309.0 40 77.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.992893868367986 22.72989567731938 26.36530444198064 13.91190601233199 2 34.305320521548566 23.954828084780818 27.46031977592344 14.279531617747173 3 30.995150194835087 24.403256760874783 30.272055915400724 14.329537128889408 4 27.099421005880714 26.205562363437135 30.231856995584604 16.463159635097547 5 24.106951819649492 31.24161171733676 28.977342721726217 15.674093741287532 6 23.180188416227395 39.342585568587786 26.688921955742284 10.788304059442531 7 83.58668378362607 5.230641302445002 8.406112829290748 2.776562084638177 8 83.23575369732806 4.9478710781739315 8.850489194919376 2.9658860295786247 9 78.24257778815169 7.192121660085713 10.397012960909793 4.168287590852801 10 42.23423327044147 31.02092288939462 16.049499782796158 10.695344057367748 11 35.179322842712004 23.548705529944954 25.775450130646487 15.496521496696555 12 32.74291169853404 22.628101638430167 28.642378738661634 15.98660792437416 13 24.050786796599947 31.603726180519086 27.32464842154403 17.020838601336937 14 17.58881043615828 34.49132157190744 30.069197253506058 17.850670738428224 15 17.12238950159823 28.057468246095198 38.95421213359009 15.865930118716488 16 21.22097735244727 24.765614362685028 37.465312222416735 16.548096062450966 17 21.692909429240174 24.4204385572478 29.010895852379193 24.87575616113283 18 22.756721972599898 26.333534327932412 32.79178256274597 18.117961136721714 19 26.40550336179676 27.527750222066615 27.45318770950445 18.613558706632176 20 27.95737617760142 27.550524206881793 27.239630947981304 17.25246866753548 21 24.833531086084044 27.418662024339795 29.67490744522897 18.07289944434719 22 23.427622493240747 23.594334545784623 30.34410599547438 22.63393696550025 23 20.645306127741794 27.694948551866332 30.31217378900754 21.347571531384336 24 21.041622091251547 25.6631200845474 34.37737060162222 18.917887222578823 25 19.791241174067807 27.693327627680198 32.55796424889615 19.957466949355844 26 19.068146894633443 32.73221359890555 28.178956513845932 20.02068299261507 27 18.564687842420234 32.182639253596825 30.817658996453417 18.43501390752952 28 17.619851134322744 29.020378258868075 34.99915711942321 18.36061348738597 29 18.64946217735504 27.012944700550467 34.682266441034024 19.655326681060473 30 20.61912820213573 28.80479534211226 32.02403182198362 18.55204463376839 31 25.545440988634077 27.578079918046072 28.155209974519074 18.721269118800777 32 26.104984017687528 27.96507556748556 28.054712674978767 17.87522773984815 33 24.905419073739083 27.882165295364803 27.812708693988963 19.399706936907148 34 20.26098500320943 28.768729778970776 29.61315023373727 21.357134984082524 35 20.246234593115613 28.83883475002107 30.51098014043687 20.403950516426445 36 24.772908521522634 28.10682538756297 28.12846472544786 18.991801365466536 37 20.80885737812271 31.484750345256852 28.602666096101352 19.103726180519086 38 20.33019846595735 31.937960747699908 26.494816284452742 21.237024501889998 39 20.026194134847923 30.803962187080586 28.403697652253406 20.76614602581808 40 23.128886165736258 27.783775197266475 27.36703558901143 21.72030304798584 41 19.19149922519824 26.97817587675789 28.58232349756537 25.248001400478497 42 21.16999928679336 27.347017175312676 27.42676664527047 24.056216892623496 43 21.582200307327227 27.003381247852275 27.610984679024593 23.803433765795905 44 19.938583182587383 29.702138971556025 29.25516912722958 21.104108718627014 45 19.85696964981554 32.82574092444548 26.070539378732178 21.246750047006802 46 21.182318310607975 31.528920529329003 27.560654983045136 19.72810617701789 47 20.60867324113517 29.766084430699006 27.652318245771006 21.97292408239482 48 21.166838484630397 27.88945945420241 30.682960196585686 20.26074186458151 49 21.304049716986636 26.743871285652226 30.558473219090597 21.393605778270537 50 19.95074011398339 30.58238185083607 29.16318167966648 20.30369635551406 51 19.206979051175818 31.81987642074005 27.143834328580784 21.82931019950335 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 906.0 1 1686.5 2 2467.0 3 7327.5 4 12188.0 5 8857.0 6 5526.0 7 5576.5 8 5627.0 9 5906.0 10 6185.0 11 6123.0 12 6061.0 13 5996.0 14 5931.0 15 5542.5 16 5154.0 17 4906.0 18 4658.0 19 5113.0 20 5568.0 21 5704.5 22 5841.0 23 6758.5 24 7676.0 25 9473.5 26 12665.5 27 14060.0 28 17210.5 29 20361.0 30 22981.0 31 25601.0 32 29300.0 33 32999.0 34 38400.5 35 43802.0 36 45721.0 37 47640.0 38 55016.5 39 62393.0 40 72280.0 41 82167.0 42 92034.5 43 101902.0 44 105605.5 45 109309.0 46 105981.5 47 102654.0 48 99128.5 49 95603.0 50 89272.5 51 82942.0 52 77787.0 53 72632.0 54 66302.0 55 59972.0 56 56930.0 57 53888.0 58 48475.0 59 43062.0 60 38369.0 61 33676.0 62 28837.5 63 23999.0 64 19891.0 65 15783.0 66 12789.0 67 9795.0 68 7952.5 69 6110.0 70 4920.0 71 3730.0 72 3024.5 73 2319.0 74 1681.5 75 887.0 76 730.0 77 541.5 78 353.0 79 259.0 80 165.0 81 100.0 82 35.0 83 32.5 84 30.0 85 25.5 86 21.0 87 16.0 88 11.0 89 7.0 90 3.0 91 5.0 92 7.0 93 6.0 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1233864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.984160936959288 #Duplication Level Percentage of deduplicated Percentage of total 1 80.40158653838839 17.675614180467896 2 5.0967673013458885 2.2409630522203936 3 1.7508932047627295 1.154757539907968 4 1.0251177629745925 0.901454155222765 5 0.7388330866569099 0.8121312741307948 6 0.5702624109756935 0.7522044371512839 7 0.4766325550321176 0.7334856758334124 8 0.4351805453532584 0.7653663316543794 9 0.39068188730735687 0.7729932137147932 >10 6.866598254005823 38.74403483059745 >50 2.129081684074947 31.293343747796747 >100 0.11688057139039854 3.4332883064344877 >500 7.420988659707821E-4 0.09103446862555253 >1k 3.7104943298539106E-4 0.10163884221096636 >5k 3.7104943298539106E-4 0.5276899440310926 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6469 0.5242879280050313 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1246 0.10098357679614609 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01823539709400712 0.0 2 0.0 0.0 0.0 0.06078465698002373 0.0 3 0.0 0.0 0.0 0.08550375081856672 0.0 4 0.0 0.0 0.0 0.12294709951826133 0.0 5 0.0 0.0 0.0 0.22814507919835572 0.0 6 0.0 0.0 0.0 0.3264541310873808 0.0 7 0.0 0.0 0.0 0.3982610725331155 0.0 8 0.0 0.0 0.0 0.5356343973079691 0.0 9 0.0 0.0 0.0 0.5860451394967354 0.0 10 0.0 0.0 0.0 0.6767358477109309 0.0 11 0.0 0.0 0.0 0.8126503407182639 0.0 12 0.0 0.0 0.0 0.9189019211193454 0.0 13 0.0 0.0 0.0 0.961208042377442 0.0 14 0.0 0.0 0.0 0.9828473802623303 0.0 15 8.104620930669831E-5 0.0 0.0 1.018669804775891 0.0 16 8.104620930669831E-5 0.0 0.0 1.0924218552449865 0.0 17 8.104620930669831E-5 0.0 0.0 1.177439328807713 0.0 18 8.104620930669831E-5 0.0 0.0 1.2732359482082305 0.0 19 8.104620930669831E-5 0.0 0.0 1.3354794369557748 0.0 20 8.104620930669831E-5 0.0 0.0 1.4055844080060687 0.0 21 8.104620930669831E-5 0.0 0.0 1.4931143140573029 0.0 22 8.104620930669831E-5 0.0 0.0 1.5925580128766217 0.0 23 8.104620930669831E-5 0.0 0.0 1.7038344582547185 0.0 24 8.104620930669831E-5 0.0 0.0 1.7827734661194428 0.0 25 8.104620930669831E-5 0.0 0.0 1.8543372689372573 0.0 26 8.104620930669831E-5 0.0 0.0 1.9274409497318992 0.0 27 8.104620930669831E-5 0.0 0.0 2.0054074030849427 0.0 28 1.6209241861339662E-4 0.0 0.0 2.0906680152755897 0.0 29 1.6209241861339662E-4 0.0 0.0 2.1863835884668004 0.0 30 1.6209241861339662E-4 0.0 0.0 2.3001724663334047 0.0 31 1.6209241861339662E-4 0.0 0.0 2.405127307385579 0.0 32 1.6209241861339662E-4 0.0 0.0 2.499140910181349 0.0 33 1.6209241861339662E-4 0.0 0.0 2.5981793779541342 0.0 34 1.6209241861339662E-4 0.0 0.0 2.7002165554712674 0.0 35 1.6209241861339662E-4 0.0 0.0 2.8183819286404335 0.0 36 1.6209241861339662E-4 0.0 0.0 2.921796891715781 0.0 37 1.6209241861339662E-4 0.0 0.0 3.0287778880006226 0.0 38 1.6209241861339662E-4 0.0 0.0 3.1487262777745357 0.0 39 1.6209241861339662E-4 0.0 0.0 3.3169782082952417 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGCG 45 3.8562575E-10 45.0 1 CGTACGT 20 7.033489E-4 45.0 29 ATGCGCG 45 3.8562575E-10 45.0 1 TCGAATA 30 2.1656324E-6 44.999996 30 CGACGGT 265 0.0 43.301888 28 TTGTACG 80 0.0 42.1875 1 CGTTTTT 4175 0.0 41.874252 1 CCGCTAT 70 0.0 41.785717 20 TCACGAC 270 0.0 41.666664 25 ACGGTCT 270 0.0 41.666664 30 CGTAAGG 185 0.0 41.351353 2 GACGGTC 280 0.0 40.982143 29 CGGTCTA 280 0.0 40.982143 31 GCGTAAG 145 0.0 40.34483 1 TCGGTAG 40 3.458499E-7 39.375 1 GCGGGAT 730 0.0 39.143837 5 GACAACG 35 6.2486615E-6 38.57143 1 CAACCGG 35 6.2486615E-6 38.57143 2 CGACCCG 35 6.2486615E-6 38.57143 32 GCGTTAG 105 0.0 38.57143 1 >>END_MODULE