##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547720_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1449831 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.69606940395122 31.0 31.0 33.0 30.0 34.0 2 32.08144052651654 33.0 31.0 34.0 30.0 34.0 3 32.148291766419675 33.0 31.0 34.0 30.0 34.0 4 35.838968128009405 37.0 35.0 37.0 35.0 37.0 5 35.7739377899907 37.0 35.0 37.0 35.0 37.0 6 35.82646942988528 37.0 35.0 37.0 35.0 37.0 7 36.15183769694537 37.0 35.0 37.0 35.0 37.0 8 36.04296017949678 37.0 35.0 37.0 35.0 37.0 9 37.84579168192707 39.0 38.0 39.0 35.0 39.0 10 37.50161846449689 39.0 37.0 39.0 35.0 39.0 11 37.16182023973829 39.0 37.0 39.0 34.0 39.0 12 36.35793137269103 38.0 35.0 39.0 33.0 39.0 13 36.076301996577534 38.0 35.0 39.0 32.0 39.0 14 36.95838204590742 39.0 35.0 41.0 32.0 41.0 15 37.19799135209552 39.0 35.0 41.0 33.0 41.0 16 37.32741885088676 39.0 35.0 41.0 33.0 41.0 17 37.24007073927927 39.0 35.0 41.0 33.0 41.0 18 37.14437337869035 39.0 35.0 41.0 32.0 41.0 19 37.14078606403091 38.0 35.0 41.0 32.0 41.0 20 37.04935885630808 38.0 35.0 41.0 32.0 41.0 21 36.90340391397342 38.0 35.0 41.0 32.0 41.0 22 36.86195356562248 38.0 35.0 41.0 32.0 41.0 23 36.80837007899542 38.0 35.0 41.0 32.0 41.0 24 36.80271631659138 38.0 35.0 41.0 32.0 41.0 25 36.740520101998094 38.0 35.0 41.0 32.0 41.0 26 36.708849514184756 38.0 35.0 41.0 32.0 41.0 27 36.63006377984745 38.0 35.0 41.0 32.0 41.0 28 36.63490365428798 38.0 35.0 40.0 32.0 41.0 29 36.565534879582515 38.0 35.0 40.0 32.0 41.0 30 36.55741117412995 38.0 35.0 40.0 32.0 41.0 31 36.40564314047637 38.0 35.0 41.0 31.0 41.0 32 36.2282659151308 38.0 35.0 41.0 31.0 41.0 33 36.14420094479977 38.0 35.0 41.0 30.0 41.0 34 35.96540217446034 38.0 35.0 41.0 30.0 41.0 35 35.85886010162564 38.0 35.0 41.0 30.0 41.0 36 35.79960147079211 38.0 35.0 40.0 30.0 41.0 37 35.55197605789916 38.0 35.0 40.0 29.0 41.0 38 35.652313959351126 38.0 35.0 40.0 29.0 41.0 39 35.59549423346583 38.0 35.0 40.0 29.0 41.0 40 35.46890499651339 37.0 35.0 40.0 29.0 41.0 41 35.427042876031756 37.0 35.0 40.0 29.0 41.0 42 35.43793724923801 37.0 35.0 40.0 29.0 41.0 43 35.35079605829921 37.0 34.0 40.0 29.0 41.0 44 35.22070986204599 37.0 34.0 40.0 28.0 41.0 45 35.198153439952655 37.0 34.0 40.0 28.0 41.0 46 35.04815250880965 36.0 34.0 40.0 27.0 41.0 47 34.9334370695619 36.0 34.0 40.0 27.0 41.0 48 34.81342032278245 36.0 34.0 40.0 27.0 41.0 49 34.884069936427075 36.0 34.0 40.0 27.0 41.0 50 34.76438495245308 36.0 34.0 40.0 27.0 41.0 51 34.17784072764343 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 3.0 13 9.0 14 19.0 15 44.0 16 115.0 17 216.0 18 523.0 19 1014.0 20 1695.0 21 2723.0 22 4442.0 23 6342.0 24 9386.0 25 13793.0 26 18465.0 27 21973.0 28 23929.0 29 26166.0 30 31019.0 31 37958.0 32 48583.0 33 65937.0 34 128614.0 35 219784.0 36 86415.0 37 114829.0 38 190765.0 39 394950.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.07773871575377 23.751733822769687 30.26676902342411 13.903758438052435 2 30.926570062303817 25.54497731114868 30.184414597287546 13.344038029259961 3 29.924246343194483 24.134606033392856 32.039044550709704 13.902103072702957 4 27.21737912901573 26.655589513536405 30.877460890269283 15.24957046717859 5 23.85581491911816 31.483255634622243 29.673389519192238 14.987539927067361 6 22.325153759300225 40.416158848858935 26.404249874640563 10.85443751720028 7 87.83782385671157 3.9760496223352924 6.455235127404505 1.7308913935486274 8 88.99202734663557 3.11119020078892 6.188031570576157 1.7087508819993502 9 85.31394348720644 5.075901949951408 7.139935620082616 2.4702189427595354 10 49.584744704727655 27.79068732838517 13.403631181841194 9.220936785045982 11 42.827198480374605 20.9384404113307 22.284252440456854 13.950108667837839 12 39.820020402377935 20.699102171218577 24.974772921809507 14.506104504593983 13 26.087730225108995 32.985430715717904 24.49575157380412 16.431087485368984 14 17.220007021508025 36.66565275539011 28.564294735041535 17.55004548806033 15 17.016121189297234 26.16015245914869 42.26368452598958 14.560041825564497 16 21.95918006995298 22.031533330436446 40.4489902616236 15.560296337986978 17 22.337500025865083 21.707150695494853 27.604113858787677 28.351235419852383 18 23.388588049227806 25.83611469198824 32.27224414431751 18.503053114466443 19 28.22749685997885 26.532195821444017 26.498674673117073 18.741632645460058 20 30.500313484813056 26.498674673117073 25.104443207518667 17.896568634551198 21 25.187487369217514 27.462097306513655 29.83782247724045 17.512592847028376 22 23.691037093288806 22.761480476000308 29.607105931656864 23.94037649905403 23 20.75097028550224 27.743302495256344 29.056352085174066 22.449375134067353 24 22.04208628453937 24.782267726376382 35.445786439936796 17.729859549147452 25 20.490871004965406 25.487384391698065 32.62704411755577 21.394700485780756 26 18.568371072214624 32.07829050420359 27.693227693434615 21.66011073014717 27 17.742481709937227 32.49254568291063 31.11335045256999 18.651622154582153 28 15.771355420045508 29.426809055676145 35.92087629523717 18.880959229041178 29 18.07155454670234 26.90968809468138 35.06112091685169 19.957636441764592 30 20.23966931318202 28.901230557216667 32.84272442788159 18.016375701719717 31 28.524910834435186 25.697064002632032 27.52520811046253 18.252817052470252 32 28.766939043240214 26.95458987978599 27.455682765784427 16.822788311189374 33 27.4751333086408 26.78201804210284 26.765464388608052 18.97738426064831 34 20.88636537637835 27.898217102545054 29.58517234077627 21.630245180300324 35 19.4764079399599 28.673962689444494 31.218811020043024 20.63081835055258 36 27.93815279160123 26.404111927528106 28.156040255726356 17.501695025144308 37 21.53582038182381 31.810811053150335 28.665892783365788 17.98747578166007 38 21.517818283648232 32.00566134949522 25.058230924845727 21.418289442010828 39 20.847395317109374 30.18779430154273 27.237174539653243 21.727635841694653 40 24.10639584889549 26.517573427523622 26.65634822265492 22.71968250092597 41 19.013871271893066 25.571463156740336 27.94836087792301 27.466304693443583 42 21.47712388547355 26.367280048502206 26.41990687190438 25.735689194119864 43 22.341638439238782 25.82087153606179 26.506951499864467 25.33053852483496 44 19.929495230823456 29.261479441396965 28.63037140190822 22.178653925871362 45 20.032403776716045 33.610951897152155 24.616386323647376 21.740258002484428 46 22.69478304712756 30.914223795738955 26.59930709165413 19.791686065479354 47 21.72694610613237 28.675204213456603 27.060602235708853 22.537247444702178 48 22.85735371915761 26.67448826794295 29.93341982617284 20.534738186726592 49 22.90225550426222 24.120604401478516 30.6011528240188 22.375987270240465 50 20.317471484607516 30.150410634067004 28.165765527154544 21.366352354170935 51 18.968486671894862 31.736940374429846 27.401952365482597 21.892620588192692 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1035.0 1 1763.0 2 2491.0 3 7437.5 4 12384.0 5 8834.0 6 5284.0 7 5390.5 8 5497.0 9 5826.0 10 6155.0 11 6264.0 12 6373.0 13 6103.0 14 5833.0 15 5475.0 16 5117.0 17 5022.5 18 4928.0 19 5158.5 20 5389.0 21 5175.0 22 4961.0 23 5725.0 24 6489.0 25 7375.0 26 10006.0 27 11751.0 28 14705.5 29 17660.0 30 21341.5 31 25023.0 32 30188.5 33 35354.0 34 38025.0 35 40696.0 36 44975.0 37 49254.0 38 54458.5 39 59663.0 40 77136.5 41 94610.0 42 112657.5 43 130705.0 44 134423.5 45 138142.0 46 132699.0 47 127256.0 48 119455.0 49 111654.0 50 104832.5 51 98011.0 52 95696.0 53 93381.0 54 86062.0 55 78743.0 56 72659.5 57 66576.0 58 61753.0 59 56930.0 60 53037.5 61 49145.0 62 41318.0 63 33491.0 64 27639.5 65 21788.0 66 17608.0 67 13428.0 68 10428.0 69 7428.0 70 5892.5 71 4357.0 72 3204.5 73 2052.0 74 1650.5 75 979.0 76 709.0 77 518.5 78 328.0 79 215.5 80 103.0 81 91.5 82 80.0 83 51.0 84 22.0 85 16.0 86 10.0 87 10.5 88 11.0 89 11.5 90 12.0 91 9.5 92 7.0 93 5.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1449831.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.808489402158656 #Duplication Level Percentage of deduplicated Percentage of total 1 81.14584921767984 14.450849958222156 2 5.8038493721061295 2.067155800697544 3 1.7560796011789566 0.9381937490082733 4 0.9322194204377796 0.6640567867741074 5 0.6340134421276629 0.5645410832478308 6 0.48193908111706485 0.5149564211135599 7 0.41788726233179097 0.5209358617772956 8 0.3221059506482114 0.45889763267927297 9 0.29294933971869686 0.469528669057481 >10 4.680564210947142 21.008258000927345 >50 2.4310351246102404 31.60955863920701 >100 1.0979999899083321 25.764127411468447 >500 0.002728434479715416 0.3548406911318983 >1k 3.897763542450594E-4 0.16673070033232 >5k 3.897763542450594E-4 0.4473685943554547 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6445 0.4445345698912494 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2402 0.1656744820603229 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.897355622827764E-5 0.0 0.0 0.0111047425527527 0.0 2 6.897355622827764E-5 0.0 0.0 0.051247352277610285 0.0 3 6.897355622827764E-5 0.0 0.0 0.07718140941944268 0.0 4 6.897355622827764E-5 0.0 0.0 0.11987604072474654 0.0 5 6.897355622827764E-5 0.0 0.0 0.22278458661733677 0.0 6 6.897355622827764E-5 0.0 0.0 0.3124502097140977 0.0 7 6.897355622827764E-5 0.0 0.0 0.37494025165691724 0.0 8 6.897355622827764E-5 0.0 0.0 0.49033301122682577 0.0 9 6.897355622827764E-5 0.0 0.0 0.5355106905563476 0.0 10 6.897355622827764E-5 0.0 0.0 0.6229001862975754 0.0 11 6.897355622827764E-5 0.0 0.0 0.764916738571599 0.0 12 6.897355622827764E-5 0.0 0.0 0.8725844598439404 0.0 13 6.897355622827764E-5 0.0 0.0 0.9172793242798644 0.0 14 6.897355622827764E-5 0.0 0.0 0.9370057613611518 0.0 15 6.897355622827764E-5 0.0 0.0 0.9666643905393111 0.0 16 6.897355622827764E-5 0.0 0.0 1.0296372473757287 0.0 17 6.897355622827764E-5 0.0 0.0 1.10205948141542 0.0 18 6.897355622827764E-5 0.0 0.0 1.19096639539367 0.0 19 6.897355622827764E-5 0.0 0.0 1.2510423628685 0.0 20 6.897355622827764E-5 0.0 0.0 1.3215333373337996 0.0 21 6.897355622827764E-5 0.0 0.0 1.411336907543017 0.0 22 6.897355622827764E-5 0.0 0.0 1.5003127950774953 0.0 23 6.897355622827764E-5 0.0 0.0 1.5911509686301368 0.0 24 6.897355622827764E-5 0.0 0.0 1.6580553181715663 0.0 25 6.897355622827764E-5 0.0 0.0 1.7149585020598952 0.0 26 6.897355622827764E-5 0.0 0.0 1.7797936449144762 0.0 27 6.897355622827764E-5 0.0 0.0 1.858492472570941 0.0 28 6.897355622827764E-5 0.0 0.0 1.9281557643615015 0.0 29 6.897355622827764E-5 0.0 0.0 2.0176144667895777 0.0 30 6.897355622827764E-5 0.0 0.0 2.1045901211934357 0.0 31 6.897355622827764E-5 0.0 0.0 2.1905311722538694 0.0 32 6.897355622827764E-5 0.0 0.0 2.2646087716430396 0.0 33 6.897355622827764E-5 0.0 0.0 2.3477219068981143 0.0 34 6.897355622827764E-5 0.0 0.0 2.442560546711996 0.0 35 6.897355622827764E-5 0.0 0.0 2.553263104458382 0.0 36 6.897355622827764E-5 0.0 0.0 2.6434115424487405 0.0 37 6.897355622827764E-5 0.0 0.0 2.740940150955525 0.0 38 6.897355622827764E-5 0.0 0.0 2.8639200017105444 0.0 39 6.897355622827764E-5 0.0 0.0 3.096153965531155 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGTCG 35 1.2122291E-7 45.000004 1 TCGTCCG 35 1.2122291E-7 45.000004 34 TCGTAAG 35 1.2122291E-7 45.000004 1 TCGAGTA 30 2.1658961E-6 45.000004 1 TGATCGC 20 7.0338976E-4 45.0 38 CGTATCG 25 3.891313E-5 45.0 41 ATAGCGC 20 7.0338976E-4 45.0 37 CGCTAGC 20 7.0338976E-4 45.0 29 TAGGACG 20 7.0338976E-4 45.0 1 ACGACGT 20 7.0338976E-4 45.0 12 ATCGATT 20 7.0338976E-4 45.0 27 TATCGCG 70 0.0 41.785717 1 CGTTTTT 4200 0.0 41.678574 1 TATAGCG 60 3.6379788E-12 41.250004 1 CGGGTAT 115 0.0 41.086956 6 AATGCGG 165 0.0 40.90909 2 ATATCGC 55 6.184564E-11 40.90909 23 TTAGTCG 55 6.184564E-11 40.90909 1 CGTAAGG 165 0.0 40.90909 2 CGGATTA 50 1.0822987E-9 40.5 25 >>END_MODULE