SRR1547719_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547719_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2321423
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12901	0.5557367183835088	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3775	0.16261577489324436	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGACA	20	7.034774E-4	45.000004	41
CGCATAA	20	7.034774E-4	45.000004	44
ATTACGA	20	7.034774E-4	45.000004	20
CCGCTAT	20	7.034774E-4	45.000004	25
ATCCGGC	20	7.034774E-4	45.000004	35
ATATCGT	20	7.034774E-4	45.000004	13
GTGTCGA	40	6.8193913E-9	45.000004	44
CGAATCG	20	7.034774E-4	45.000004	22
TCTCCGA	20	7.034774E-4	45.000004	36
CCGGTAT	20	7.034774E-4	45.000004	27
TAGTCCG	20	7.034774E-4	45.000004	1
AATCGGC	20	7.034774E-4	45.000004	24
GTACGAC	20	7.034774E-4	45.000004	44
CTAGACG	25	3.8920396E-5	45.0	1
GTCGCGA	35	1.2126475E-7	45.0	16
GCGCGTC	45	3.8562575E-10	45.0	38
CTATCCG	35	1.2126475E-7	45.0	1
TAACGCG	45	3.8562575E-10	45.0	1
TCGGCGA	25	3.8920396E-5	45.0	34
GCCGATC	25	3.8920396E-5	45.0	9