##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547719_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2321423 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.64046793712305 31.0 31.0 33.0 30.0 34.0 2 32.00982673127646 33.0 31.0 34.0 30.0 34.0 3 32.05668893605345 33.0 31.0 34.0 30.0 34.0 4 35.75266765255621 37.0 35.0 37.0 35.0 37.0 5 35.67228893657037 37.0 35.0 37.0 33.0 37.0 6 35.73722152317781 37.0 35.0 37.0 33.0 37.0 7 36.13869380978822 37.0 35.0 37.0 35.0 37.0 8 36.050237289800265 37.0 35.0 37.0 35.0 37.0 9 37.865155553296404 39.0 38.0 39.0 35.0 39.0 10 37.450918682204836 39.0 37.0 39.0 35.0 39.0 11 37.09341167034186 39.0 37.0 39.0 33.0 39.0 12 36.26886741451256 38.0 35.0 39.0 33.0 39.0 13 35.96004648872696 38.0 35.0 39.0 32.0 39.0 14 36.88249879492018 39.0 35.0 41.0 32.0 41.0 15 37.13958464269545 39.0 35.0 41.0 32.0 41.0 16 37.295897387076806 39.0 35.0 41.0 33.0 41.0 17 37.22669802099833 39.0 35.0 41.0 33.0 41.0 18 37.140658983735406 38.0 35.0 41.0 32.0 41.0 19 37.127059997251685 38.0 35.0 41.0 32.0 41.0 20 37.00750832571229 38.0 35.0 41.0 32.0 41.0 21 36.84972880857991 38.0 35.0 41.0 32.0 41.0 22 36.7998658581396 38.0 35.0 41.0 32.0 41.0 23 36.740432053960006 38.0 35.0 41.0 32.0 41.0 24 36.73183732564035 38.0 35.0 41.0 32.0 41.0 25 36.653156706037635 38.0 35.0 41.0 32.0 41.0 26 36.612761655243354 38.0 35.0 40.0 32.0 41.0 27 36.51710782567417 38.0 35.0 40.0 31.0 41.0 28 36.55343382054886 38.0 35.0 40.0 32.0 41.0 29 36.509643007758605 38.0 35.0 40.0 31.0 41.0 30 36.511790397527726 38.0 35.0 40.0 31.0 41.0 31 36.349485207995265 38.0 35.0 40.0 31.0 41.0 32 36.13649171219549 38.0 35.0 40.0 31.0 41.0 33 36.0554513330832 38.0 35.0 41.0 30.0 41.0 34 35.90847079571453 38.0 35.0 40.0 30.0 41.0 35 35.79456652234427 38.0 35.0 40.0 30.0 41.0 36 35.704995599681745 38.0 35.0 40.0 30.0 41.0 37 35.43304473161505 37.0 34.0 40.0 29.0 41.0 38 35.563532798632565 38.0 35.0 40.0 29.0 41.0 39 35.518798168192525 37.0 35.0 40.0 29.0 41.0 40 35.4185256198461 37.0 35.0 40.0 29.0 41.0 41 35.386689543439516 37.0 35.0 40.0 29.0 41.0 42 35.40199868787377 37.0 35.0 40.0 29.0 41.0 43 35.31791620915275 37.0 34.0 40.0 28.0 41.0 44 35.195619238716944 37.0 34.0 40.0 28.0 41.0 45 35.17627463844375 37.0 34.0 40.0 28.0 41.0 46 34.9919682884162 36.0 34.0 40.0 27.0 41.0 47 34.86258773174902 36.0 34.0 40.0 27.0 41.0 48 34.751064325631305 36.0 34.0 40.0 26.0 41.0 49 34.84055684810566 36.0 34.0 40.0 27.0 41.0 50 34.70510975380187 36.0 34.0 40.0 26.0 41.0 51 34.083427277148544 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 4.0 12 5.0 13 15.0 14 20.0 15 52.0 16 121.0 17 336.0 18 708.0 19 1544.0 20 2636.0 21 4363.0 22 7050.0 23 10604.0 24 15330.0 25 23074.0 26 30530.0 27 35736.0 28 38864.0 29 42938.0 30 50483.0 31 62975.0 32 80045.0 33 107178.0 34 201021.0 35 371627.0 36 139934.0 37 180521.0 38 292538.0 39 621007.0 40 160.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.219256464677052 24.64445299284103 30.607476534866763 13.528814007615155 2 29.66572658235918 25.737489462282404 30.99616054463146 13.600623410726955 3 28.08376586257653 25.628547662360546 33.52340353309155 12.76428294197137 4 26.247866071801653 27.29455166077014 31.94432897408185 14.513253293346365 5 23.666647569184935 31.50976793113534 30.963249696414657 13.860334803265067 6 21.355866638695318 41.665521535713225 26.780858120213335 10.197753705378124 7 89.35415906536636 3.2225492725797924 6.030783704650123 1.3925079574037131 8 90.39683849087392 2.596381615931263 5.619053485728365 1.3877264074664548 9 87.1197537027935 4.595801799155088 6.5105756253815015 1.77386887266991 10 48.85356955625924 33.03086081252749 11.012211044691123 7.1033585865221465 11 40.962461386830405 20.976745728805135 24.478864903121924 13.58192798124254 12 38.31227656484837 21.867406327929036 25.787286504872224 14.033030602350369 13 23.186597186294787 37.08910439846594 25.59662758575236 14.127670829486913 14 14.43020078632804 42.24434754028025 27.896553105573606 15.4288985678181 15 13.291330360731326 28.887453945274082 44.938772468438536 12.882443225556047 16 17.01900084560203 23.890174259495144 44.17661063925015 14.914214255652675 17 18.146972783503912 23.413871577907173 28.135932141621755 30.303223496967163 18 20.918419434975874 26.277287680875048 34.64892008048512 18.155372803663962 19 26.187945927993304 27.898750033923157 27.1156958469008 18.797608191182736 20 29.18317773193425 26.70982410357785 26.6637747622902 17.443223402197706 21 22.745531512352553 28.486320674861926 30.859821755879906 17.90832605690561 22 21.926809547419836 23.512345660398815 29.95356727317684 24.60727751900451 23 17.577494493679094 30.043899797667205 29.235559396111782 23.14304631254192 24 18.445625807963477 26.765695006898788 37.73689672239829 17.05178246273945 25 16.78147412169174 27.91641161477249 35.75522427407672 19.54688998945905 26 16.498888828102416 35.91732312465242 27.648472510180177 19.935315537064984 27 16.140014120649273 36.42679511661597 31.473755537013286 15.959435225721466 28 14.0371659968907 31.03910834001386 38.89730566122589 16.026420001869543 29 15.094276226262943 26.612814639985906 38.260541056067765 20.032368077683387 30 17.430903372629633 32.210588074642146 33.15134725554111 17.207161297187113 31 27.032514108803092 28.94018022566331 27.152440550472708 16.874865115060892 32 26.920513840002446 28.539003878224694 28.36841885343602 16.172063428336845 33 25.479673458908607 29.448230675753624 26.544322167911666 18.527773697426106 34 18.997485593965425 30.651415101857783 28.548653132152136 21.80244617202466 35 17.562417534417467 29.07134977123945 31.9258920067562 21.440340687586882 36 28.06976582897645 26.110321126309167 28.839595368875038 16.980317675839345 37 19.01639640858215 31.747208500992706 31.377822999082888 17.85857209134225 38 18.78421123595312 33.266233685114685 26.58115302553649 21.368402053395698 39 18.34185325121703 31.600272763731557 30.301888109146844 19.755985875904564 40 22.61091580465947 28.671853427832843 27.126637411622095 21.59059335588559 41 17.84078127941353 26.12492423827971 29.143503790562942 26.890790691743817 42 20.93685640230152 26.894323007913677 26.744587263932512 25.424233325852292 43 21.783276895249166 26.86373831912581 27.647180199386323 23.7058045862387 44 18.44105964315853 31.369379901896384 29.771911452587485 20.417649002357603 45 17.51981435524676 37.59095175674575 24.706139294734307 20.183094593273175 46 22.781026982157066 32.52181959082856 26.949806217996464 17.747347209017917 47 20.578369388086532 30.449900772069544 26.93382464117914 22.037905198664784 48 21.348371236090966 27.389278041959606 30.925557298260593 20.33679342368883 49 20.76446214240145 25.928449920587504 31.545694171204474 21.761393765806577 50 19.606939364346783 32.469739465836255 28.651564148369342 19.271757021447623 51 17.642928496874546 34.24059294665384 26.38476486189721 21.731713694574406 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1688.0 1 2403.5 2 3119.0 3 11362.5 4 19606.0 5 13667.0 6 7728.0 7 8263.0 8 8798.0 9 10046.0 10 11294.0 11 11871.5 12 12449.0 13 12428.0 14 12407.0 15 12333.5 16 12260.0 17 11615.5 18 10971.0 19 10671.0 20 10371.0 21 10757.0 22 11143.0 23 12533.0 24 13923.0 25 16902.5 26 23693.0 27 27504.0 28 32142.0 29 36780.0 30 46507.0 31 56234.0 32 61689.5 33 67145.0 34 75839.5 35 84534.0 36 89997.5 37 95461.0 38 105864.0 39 116267.0 40 145115.5 41 173964.0 42 215932.5 43 257901.0 44 251779.5 45 245658.0 46 234331.5 47 223005.0 48 210342.5 49 197680.0 50 179484.0 51 161288.0 52 141814.5 53 122341.0 54 105254.0 55 88167.0 56 79834.5 57 71502.0 58 63422.0 59 55342.0 60 45074.5 61 34807.0 62 27996.5 63 21186.0 64 17736.5 65 14287.0 66 10573.5 67 6860.0 68 5406.0 69 3952.0 70 2943.5 71 1935.0 72 1380.5 73 826.0 74 663.5 75 386.5 76 272.0 77 215.0 78 158.0 79 145.0 80 132.0 81 82.0 82 32.0 83 25.5 84 19.0 85 18.0 86 17.0 87 15.0 88 13.0 89 9.0 90 5.0 91 4.5 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2321423.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.503273801447452 #Duplication Level Percentage of deduplicated Percentage of total 1 81.1538181735379 15.016113176978541 2 8.014419061553811 2.9658598051093943 3 2.5235633200698557 1.4008254919962695 4 1.1916106665269497 0.8819479370989378 5 0.7493835848323169 0.6933024826231292 6 0.48435518390357557 0.5377293950950975 7 0.3501147984623004 0.4534788984520577 8 0.2660060628213805 0.39375864105832287 9 0.2312816118716669 0.38515202907313967 >10 2.430928153338887 10.50074665946334 >50 0.9927110628748931 13.416089840324133 >100 1.601295003156919 51.362049375890464 >500 0.009345170710774942 1.1153530569317434 >1k 9.345170710774943E-4 0.31989506690806174 >5k 0.0 0.0 >10k+ 2.3362926776937358E-4 0.5576981429974195 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12901 0.5557367183835088 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3775 0.16261577489324436 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04393856699102232 0.0 2 0.0 0.0 0.0 0.1625296208403208 0.0 3 0.0 0.0 0.0 0.2237851524689813 0.0 4 0.0 0.0 0.0 0.32036384579630683 0.0 5 0.0 0.0 0.0 0.5749059951590038 0.0 6 0.0 0.0 0.0 0.787189581562688 0.0 7 0.0 0.0 0.0 0.9459715011008334 0.0 8 0.0 0.0 0.0 1.2905877127951262 0.0 9 0.0 0.0 0.0 1.3940156533298758 0.0 10 0.0 0.0 0.0 1.5883791967254568 0.0 11 0.0 0.0 0.0 1.9293338611704975 0.0 12 0.0 0.0 0.0 2.1800421551780955 0.0 13 0.0 0.0 0.0 2.2698146783244586 0.0 14 0.0 0.0 0.0 2.3041470684145025 0.0 15 0.0 0.0 0.0 2.3659626013871664 0.0 16 0.0 0.0 0.0 2.5055752441498167 0.0 17 0.0 0.0 0.0 2.691237228200117 0.0 18 0.0 0.0 0.0 2.904597740265346 0.0 19 0.0 0.0 0.0 3.034216512888862 0.0 20 0.0 0.0 0.0 3.167798371946862 0.0 21 0.0 0.0 0.0 3.345792645286964 0.0 22 0.0 0.0 0.0 3.535546946851134 0.0 23 0.0 0.0 0.0 3.736415121242445 0.0 24 0.0 0.0 0.0 3.881713931498051 0.0 25 0.0 0.0 0.0 4.004569610967066 0.0 26 0.0 0.0 0.0 4.132077609293955 0.0 27 0.0 0.0 0.0 4.259370222488534 0.0 28 0.0 0.0 0.0 4.387136682974193 0.0 29 0.0 0.0 0.0 4.540361666098768 0.0 30 0.0 0.0 0.0 4.720165174550265 0.0 31 0.0 0.0 0.0 4.8914825087887905 0.0 32 0.0 0.0 0.0 5.036781319044397 0.0 33 0.0 0.0 0.0 5.1862155238403345 0.0 34 0.0 0.0 0.0 5.340000508308912 0.0 35 0.0 0.0 0.0 5.5525425568713676 0.0 36 0.0 0.0 0.0 5.725410664062517 0.0 37 0.0 0.0 0.0 5.894186453739796 0.0 38 0.0 0.0 0.0 6.071146878444816 0.0 39 0.0 0.0 0.0 6.304925901052932 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACA 20 7.034774E-4 45.000004 41 CGCATAA 20 7.034774E-4 45.000004 44 ATTACGA 20 7.034774E-4 45.000004 20 CCGCTAT 20 7.034774E-4 45.000004 25 ATCCGGC 20 7.034774E-4 45.000004 35 ATATCGT 20 7.034774E-4 45.000004 13 GTGTCGA 40 6.8193913E-9 45.000004 44 CGAATCG 20 7.034774E-4 45.000004 22 TCTCCGA 20 7.034774E-4 45.000004 36 CCGGTAT 20 7.034774E-4 45.000004 27 TAGTCCG 20 7.034774E-4 45.000004 1 AATCGGC 20 7.034774E-4 45.000004 24 GTACGAC 20 7.034774E-4 45.000004 44 CTAGACG 25 3.8920396E-5 45.0 1 GTCGCGA 35 1.2126475E-7 45.0 16 GCGCGTC 45 3.8562575E-10 45.0 38 CTATCCG 35 1.2126475E-7 45.0 1 TAACGCG 45 3.8562575E-10 45.0 1 TCGGCGA 25 3.8920396E-5 45.0 34 GCCGATC 25 3.8920396E-5 45.0 9 >>END_MODULE