##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547718_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2601674 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60950680215892 31.0 31.0 33.0 30.0 34.0 2 31.9900302651293 33.0 31.0 34.0 30.0 34.0 3 32.05206801467055 33.0 31.0 34.0 30.0 34.0 4 35.76617670007849 37.0 35.0 37.0 35.0 37.0 5 35.701796996856636 37.0 35.0 37.0 33.0 37.0 6 35.76100772041386 37.0 35.0 37.0 33.0 37.0 7 36.09607083746849 37.0 35.0 37.0 35.0 37.0 8 35.99019938701006 37.0 35.0 37.0 35.0 37.0 9 37.77660959828172 39.0 38.0 39.0 35.0 39.0 10 37.4334397776201 39.0 37.0 39.0 35.0 39.0 11 37.105820329526296 39.0 37.0 39.0 33.0 39.0 12 36.494900206559315 39.0 35.0 39.0 33.0 39.0 13 36.26245794054136 39.0 35.0 39.0 32.0 39.0 14 37.25151998290332 39.0 35.0 41.0 32.0 41.0 15 37.46954653042618 39.0 35.0 41.0 33.0 41.0 16 37.5698550241114 40.0 35.0 41.0 33.0 41.0 17 37.47401288554984 39.0 35.0 41.0 33.0 41.0 18 37.365975906281875 39.0 35.0 41.0 32.0 41.0 19 37.32437961097355 39.0 35.0 41.0 32.0 41.0 20 37.20729653292457 39.0 35.0 41.0 32.0 41.0 21 37.06656099111572 39.0 35.0 41.0 32.0 41.0 22 37.01922416105938 39.0 35.0 41.0 32.0 41.0 23 36.91485174545312 38.0 35.0 41.0 32.0 41.0 24 36.91512656850935 38.0 35.0 41.0 32.0 41.0 25 36.834691433284874 38.0 35.0 41.0 32.0 41.0 26 36.809877025330614 38.0 35.0 41.0 32.0 41.0 27 36.71546934781222 38.0 35.0 41.0 31.0 41.0 28 36.71547549769879 38.0 35.0 41.0 32.0 41.0 29 36.66163708443102 38.0 35.0 41.0 31.0 41.0 30 36.659031454363614 38.0 35.0 41.0 31.0 41.0 31 36.51881711544183 38.0 35.0 41.0 31.0 41.0 32 36.32617614658869 38.0 35.0 41.0 30.0 41.0 33 36.23145789979836 38.0 35.0 41.0 30.0 41.0 34 36.03508241232376 38.0 35.0 41.0 30.0 41.0 35 35.913105946402204 38.0 35.0 41.0 30.0 41.0 36 35.814279959748994 38.0 35.0 41.0 29.0 41.0 37 35.570192114769185 38.0 35.0 40.0 28.0 41.0 38 35.664345725098535 38.0 35.0 40.0 29.0 41.0 39 35.59308852684848 38.0 35.0 40.0 29.0 41.0 40 35.476596222278424 38.0 35.0 40.0 28.0 41.0 41 35.423066456443046 38.0 35.0 40.0 28.0 41.0 42 35.43342786221486 38.0 35.0 40.0 28.0 41.0 43 35.33480520618648 38.0 34.0 40.0 27.0 41.0 44 35.183923504635864 37.0 34.0 40.0 27.0 41.0 45 35.16867678271759 37.0 34.0 40.0 27.0 41.0 46 34.98853738016369 37.0 34.0 40.0 26.0 41.0 47 34.89180389241696 37.0 34.0 40.0 26.0 41.0 48 34.75136123895615 37.0 34.0 40.0 26.0 41.0 49 34.82399255248736 36.0 34.0 40.0 26.0 41.0 50 34.69868899792979 36.0 34.0 40.0 26.0 41.0 51 34.08335517824293 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 10.0 12 20.0 13 26.0 14 40.0 15 108.0 16 205.0 17 501.0 18 1037.0 19 1989.0 20 3299.0 21 5440.0 22 8400.0 23 11911.0 24 17659.0 25 25527.0 26 35154.0 27 41622.0 28 44928.0 29 48871.0 30 56584.0 31 69027.0 32 86469.0 33 114090.0 34 206565.0 35 337063.0 36 167826.0 37 226003.0 38 367369.0 39 723776.0 40 153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.15915060841596 23.46147134498788 29.76706535868829 13.612312687907863 2 31.743254535349163 24.72023781611378 30.0041050492875 13.53240259924956 3 29.015241725135432 24.839007500555415 32.55354052813688 13.592210246172273 4 26.357568242600728 27.00641971284642 31.562486306893177 15.073525737659676 5 23.584891881150366 32.23866633559777 30.308755055398944 13.867686727852913 6 22.425253894223488 40.31942510860315 26.91824571410561 10.337075283067747 7 86.61734713880371 3.8920325913238933 6.969282085303539 2.5213381845688585 8 87.47794689111703 2.9879223915063915 7.730983974164326 1.8031467432122548 9 83.0141670324568 5.39564142163853 8.636170404132109 2.954021141772566 10 46.57804936360205 32.4858149022514 12.458978334718338 8.477157399428215 11 36.52625194394071 21.99422371903628 25.419479919467236 16.060044417555773 12 34.58696208671802 20.685681603459926 27.579973509363587 17.147382800458473 13 24.819250989939555 31.093864950028326 26.65456932728697 17.432314732745148 14 17.459412670457557 34.47257419645967 29.07028320996405 18.99772992311873 15 16.003503897874985 26.80839336519487 40.412557453393475 16.775545283536676 16 21.735198183938493 22.963561153318977 38.27381908724921 17.027421575493317 17 21.9159279756034 22.028394026307677 28.36569839265027 27.68997960543865 18 22.628546082253195 26.337619548029462 31.923753706267583 19.110080663449764 19 26.718681894810803 26.37378856843709 28.024725618966865 18.88280391778524 20 28.536357745051838 26.23530081017068 27.29150539229742 17.936836052480057 21 26.067255159562652 26.006025351369928 29.999723255104215 17.92699623396321 22 25.359633835753442 21.23678831398553 29.384042735561795 24.019535114699227 23 20.0488992856138 27.384599300296653 30.153739476967523 22.41276193712202 24 21.247281557950764 25.681772581806943 34.65165120610807 18.419294654134223 25 20.587052797544967 26.58030944691764 32.40148458261873 20.431153172918666 26 19.633858815516472 31.78530438479225 27.13472172147625 21.446115078215026 27 18.441818613707945 30.972289379837754 31.61360723903148 18.97228476742282 28 17.319310566965733 27.937896907913906 35.34470498609741 19.398087539022953 29 17.717900090480207 26.63804150712195 35.238542569130495 20.40551583326735 30 19.683519149593685 28.469016487077166 32.90573684481607 18.94172751851308 31 27.519896804903304 25.57341926774838 27.273401663698067 19.63328226365025 32 26.902909434464117 27.17058324755523 27.77219590156184 18.154311416418814 33 25.1547657392894 26.635081874208684 27.4660852973893 20.744067089112626 34 20.59793040942101 27.77234964872617 29.366707742784072 22.263012199068754 35 20.477738563709366 27.206560084007453 30.611329474791997 21.704371877491184 36 26.704767776439326 25.547628180932737 28.436960203315248 19.31064383931269 37 20.733227914027662 30.031472044537477 29.056638149130137 20.178661892304724 38 20.482889093714277 31.512672225651638 25.86680729407297 22.137631386561115 39 20.480621323040474 29.703375595866355 28.128428081304573 21.6875749997886 40 23.083330194328727 26.119682942597727 28.554192416113626 22.24279444695992 41 19.521892443096252 25.178058434684747 28.970116932405826 26.329932189813178 42 21.805691258781845 25.26150470812254 27.145291839023646 25.787512194071972 43 22.698808536350057 25.467487471527946 26.990737502085192 24.8429664900368 44 20.608269906221917 28.11874200995205 29.662094482244893 21.610893601581136 45 19.946964915665838 32.731887238754744 25.72209277565137 21.599055069928056 46 22.506855201689373 30.041619357382977 26.828649554094785 20.622875886832862 47 21.952865731832656 27.752862195647882 27.67814107378557 22.61613099873389 48 22.16745833644031 26.693390486279217 30.05530285500797 21.083848322272505 49 22.10261546988593 25.144080311368754 30.884807243336404 21.86849697540891 50 20.203568932925496 29.766142875702332 29.366707742784072 20.6635804485881 51 20.02237789976761 30.42125954289431 27.85618029007477 21.70018226726331 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1959.0 1 3376.0 2 4793.0 3 17434.5 4 30076.0 5 20927.0 6 11778.0 7 11982.5 8 12187.0 9 12684.0 10 13181.0 11 13108.0 12 13035.0 13 12566.5 14 12098.0 15 11345.5 16 10593.0 17 9487.5 18 8382.0 19 8123.5 20 7865.0 21 9187.5 22 10510.0 23 11626.5 24 12743.0 25 14914.0 26 21207.5 27 25330.0 28 30415.0 29 35500.0 30 44992.5 31 54485.0 32 56360.0 33 58235.0 34 65974.0 35 73713.0 36 80831.0 37 87949.0 38 99796.5 39 111644.0 40 136796.0 41 161948.0 42 190473.0 43 218998.0 44 222862.5 45 226727.0 46 223407.0 47 220087.0 48 212823.0 49 205559.0 50 187919.0 51 170279.0 52 165159.5 53 160040.0 54 149247.5 55 138455.0 56 129246.5 57 120038.0 58 112929.5 59 105821.0 60 94317.5 61 82814.0 62 73477.5 63 64141.0 64 56464.5 65 48788.0 66 37706.5 67 26625.0 68 21689.0 69 16753.0 70 13181.0 71 9609.0 72 7667.0 73 5725.0 74 4390.5 75 2243.0 76 1430.0 77 1133.5 78 837.0 79 625.5 80 414.0 81 323.5 82 233.0 83 143.0 84 53.0 85 45.0 86 37.0 87 40.5 88 44.0 89 26.0 90 8.0 91 6.0 92 4.0 93 5.0 94 6.0 95 4.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2601674.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.155909655239093 #Duplication Level Percentage of deduplicated Percentage of total 1 82.41670017046182 14.963501623778333 2 6.5482145943206795 2.3777758515520873 3 1.9334926984221026 1.0531295625484842 4 1.0007063817340127 0.7267493863273576 5 0.6254163400182386 0.5677501283140718 6 0.4331827358781169 0.4718895970087433 7 0.33037805955264143 0.41988199409176713 8 0.25919750173014106 0.37647731394208955 9 0.22263534012533243 0.36379324092410664 >10 3.10067083273724 14.113272744120678 >50 1.6368438968747747 21.732651156635203 >100 1.4840459074492063 40.28341966919359 >500 0.005960878486997141 0.723949092141189 >1k 0.0021288851739275504 0.7309837282741146 >5k 2.1288851739275502E-4 0.3836968840195186 >10k+ 2.1288851739275502E-4 0.7110780271287482 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18397 0.7071216455251503 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 9927 0.3815620250654002 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3983 0.15309373887735359 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.016028141880958184 0.0 2 0.0 0.0 0.0 0.06253665908949392 0.0 3 0.0 0.0 0.0 0.09413170135843307 0.0 4 0.0 0.0 0.0 0.1344134584117764 0.0 5 0.0 0.0 0.0 0.24299739321682887 0.0 6 0.0 0.0 0.0 0.358192456087888 0.0 7 0.0 0.0 0.0 0.4383716022837604 0.0 8 0.0 0.0 0.0 0.5915422147432768 0.0 9 0.0 0.0 0.0 0.6621890367509534 0.0 10 0.0 0.0 0.0 0.7746166506641493 0.0 11 0.0 0.0 0.0 0.9295169187223303 0.0 12 0.0 0.0 0.0 1.0515537304058848 0.0 13 0.0 0.0 0.0 1.115973792258369 0.0 14 3.843679108143449E-5 0.0 0.0 1.1408423960880572 0.0 15 3.843679108143449E-5 0.0 0.0 1.2034943655507955 0.0 16 3.843679108143449E-5 0.0 0.0 1.273872130020902 0.0 17 7.687358216286899E-5 0.0 0.0 1.361815508015224 0.0 18 7.687358216286899E-5 0.0 0.0 1.476549329393306 0.0 19 7.687358216286899E-5 0.0 0.0 1.5500020371499272 0.0 20 7.687358216286899E-5 0.0 0.0 1.6315649078247314 0.0 21 7.687358216286899E-5 0.0 0.0 1.732461484413497 0.0 22 7.687358216286899E-5 0.0 0.0 1.8430056955637024 0.0 23 7.687358216286899E-5 0.0 0.0 1.9659649902332115 0.0 24 7.687358216286899E-5 0.0 0.0 2.0526783909129276 0.0 25 7.687358216286899E-5 0.0 0.0 2.14946223085598 0.0 26 7.687358216286899E-5 0.0 0.0 2.226720180929663 0.0 27 7.687358216286899E-5 0.0 0.0 2.306784016752291 0.0 28 7.687358216286899E-5 0.0 0.0 2.395419256986079 0.0 29 7.687358216286899E-5 0.0 0.0 2.495739281708623 0.0 30 7.687358216286899E-5 0.0 0.0 2.6178914037654217 0.0 31 7.687358216286899E-5 0.0 0.0 2.7250531773004614 0.0 32 7.687358216286899E-5 0.0 0.0 2.83701954972068 0.0 33 7.687358216286899E-5 0.0 0.0 2.937531758398631 0.0 34 7.687358216286899E-5 0.0 0.0 3.067063744343065 0.0 35 7.687358216286899E-5 0.0 0.0 3.2020537546210632 0.0 36 7.687358216286899E-5 0.0 0.0 3.3096767696490796 0.0 37 7.687358216286899E-5 0.0 0.0 3.4250255796844646 0.0 38 7.687358216286899E-5 0.0 0.0 3.557901566452984 0.0 39 7.687358216286899E-5 0.0 0.0 3.7601175243324105 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGC 40 6.8212103E-9 45.000004 12 ACGTTAG 70 0.0 45.000004 1 GTCGTAC 20 7.0349313E-4 45.000004 20 CGGTCTA 725 0.0 43.448277 31 CGTTTTT 9880 0.0 43.064274 1 CATTAGA 1540 0.0 41.055195 17 TATAGCG 160 0.0 40.781254 1 CACGACG 800 0.0 40.78125 26 TCACGAC 795 0.0 40.4717 25 CTCACGA 795 0.0 40.4717 24 TAACGCG 95 0.0 40.26316 1 ATATACG 45 1.9299478E-8 40.0 1 TACGTAC 45 1.9299478E-8 40.0 24 TTACGGG 800 0.0 39.9375 3 ACGGTCT 795 0.0 39.905663 30 TATTACG 85 0.0 39.705883 1 CGTACAA 85 0.0 39.705883 36 TCTCACG 815 0.0 39.478527 23 TAGCGAG 275 0.0 39.272728 1 GCGATAA 195 0.0 39.23077 9 >>END_MODULE