##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547717_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2248136 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61991979132935 31.0 31.0 33.0 30.0 34.0 2 31.993897611176546 33.0 31.0 34.0 30.0 34.0 3 31.9515273986983 33.0 31.0 34.0 30.0 34.0 4 35.723545194774694 37.0 35.0 37.0 33.0 37.0 5 35.677065355476714 37.0 35.0 37.0 33.0 37.0 6 35.73866839016856 37.0 35.0 37.0 33.0 37.0 7 36.115028628161284 37.0 35.0 37.0 35.0 37.0 8 36.01637178533683 37.0 35.0 37.0 35.0 37.0 9 37.81506323460858 39.0 38.0 39.0 35.0 39.0 10 37.44639648135166 39.0 37.0 39.0 35.0 39.0 11 37.110099655892704 39.0 37.0 39.0 33.0 39.0 12 36.68204103310476 39.0 35.0 39.0 33.0 39.0 13 36.534694965073285 39.0 35.0 39.0 33.0 39.0 14 37.64296910863044 40.0 35.0 41.0 33.0 41.0 15 37.81097317955853 40.0 36.0 41.0 33.0 41.0 16 37.8836017927741 40.0 35.0 41.0 33.0 41.0 17 37.775042968930705 40.0 35.0 41.0 33.0 41.0 18 37.5670088464399 39.0 36.0 41.0 33.0 41.0 19 37.44466838305156 39.0 36.0 41.0 33.0 41.0 20 37.24700107110958 39.0 35.0 41.0 33.0 41.0 21 37.11339260614127 39.0 35.0 41.0 32.0 41.0 22 37.065044997277745 39.0 35.0 41.0 32.0 41.0 23 36.976209624328774 38.0 35.0 41.0 32.0 41.0 24 36.91834034951622 38.0 35.0 41.0 32.0 41.0 25 36.86041769714999 38.0 35.0 41.0 32.0 41.0 26 36.82015456360291 38.0 35.0 41.0 32.0 41.0 27 36.72787322475153 38.0 35.0 41.0 32.0 41.0 28 36.69926152154496 38.0 35.0 41.0 32.0 41.0 29 36.61004005095777 38.0 35.0 41.0 31.0 41.0 30 36.539589241931985 38.0 35.0 41.0 31.0 41.0 31 36.360977716650595 38.0 35.0 41.0 31.0 41.0 32 36.02177893152371 38.0 35.0 41.0 30.0 41.0 33 35.79178128013608 38.0 35.0 41.0 29.0 41.0 34 35.47404249564973 38.0 35.0 41.0 27.0 41.0 35 35.27183008501265 38.0 35.0 41.0 25.0 41.0 36 35.16470622773711 38.0 35.0 41.0 24.0 41.0 37 34.894520616190476 38.0 34.0 40.0 23.0 41.0 38 34.99387848421981 38.0 34.0 40.0 24.0 41.0 39 34.909699858015706 38.0 34.0 40.0 23.0 41.0 40 34.809968347110676 38.0 34.0 40.0 23.0 41.0 41 34.728923428120005 38.0 34.0 40.0 23.0 41.0 42 34.72709658134561 38.0 34.0 40.0 23.0 41.0 43 34.63231228004 38.0 34.0 40.0 23.0 41.0 44 34.47707611995004 38.0 34.0 40.0 22.0 41.0 45 34.47726561026557 38.0 34.0 40.0 23.0 41.0 46 34.28069476223858 37.0 34.0 40.0 22.0 41.0 47 34.190573435059086 37.0 34.0 40.0 21.0 41.0 48 34.05452383663622 37.0 33.0 40.0 20.0 41.0 49 34.1171116871933 37.0 34.0 40.0 21.0 41.0 50 33.99671194269386 37.0 33.0 40.0 20.0 41.0 51 33.42567620464242 36.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 3.0 12 7.0 13 13.0 14 24.0 15 58.0 16 155.0 17 397.0 18 986.0 19 1938.0 20 3433.0 21 5619.0 22 8626.0 23 12930.0 24 19611.0 25 31246.0 26 43916.0 27 50373.0 28 49459.0 29 47973.0 30 50917.0 31 58620.0 32 71039.0 33 91799.0 34 155307.0 35 257560.0 36 149384.0 37 188084.0 38 306045.0 39 642471.0 40 139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.246123899977583 22.39335164776508 28.047191095200645 19.313333357056692 2 35.32499813178562 23.818265443015903 28.56833394420978 12.288402480988694 3 26.788859748698478 23.791843553948695 36.78972268581616 12.629574011536668 4 24.480147108537917 25.71881772277122 36.14905859787842 13.65197657081244 5 22.57950586619315 29.92287833120416 34.55004501507026 12.947570787532428 6 20.379505510342792 37.6430073625439 31.71729824174338 10.260188885369924 7 82.86491564567268 3.342146560528367 12.33973389510243 1.4532038986965201 8 83.98971414540756 2.690095261140785 11.811740926705502 1.50844966674614 9 80.40510004732809 4.705186874815403 12.738775590088855 2.150937487767644 10 41.339447435564395 34.4408879178128 17.066805566922998 7.152859079699804 11 29.90704299028173 23.125513758954085 32.595314518338746 14.372128732425441 12 29.572098840995388 22.073130807033024 32.91126515477711 15.443505197194476 13 22.183978193490073 29.31633139632122 32.32068700470078 16.179003405487926 14 15.172569631018765 33.49721725020194 34.084592747058004 17.245620371721284 15 14.4540187960159 28.19317870449119 42.533102979535045 14.819699519957869 16 18.39986548856475 25.668153528078374 41.0102413732977 14.921739610059179 17 18.76572413768562 24.5727126828626 33.584044737506986 23.077518441944793 18 19.235446609991566 26.706435909571308 36.320889839404735 17.737227641032394 19 22.7992434621393 27.22637776362284 32.38198222883313 17.592396545404725 20 24.75174989413452 27.171443364636303 32.4559991032571 15.620807637972081 21 22.665577171487847 26.114478839358473 34.811595028058804 16.40834896109488 22 21.255698053854395 22.90034944505137 34.91221171672888 20.931740784365356 23 18.08097908667447 26.712485365654036 35.11504642067918 20.091489126992318 24 17.76356056751015 26.21700822370177 39.15123462281641 16.868196585971667 25 17.577406349082082 28.369902888437355 35.91922374802948 18.13346701445108 26 17.4294615628236 32.884798784415175 31.8351291914724 17.850610461288817 27 16.873178490980973 31.922534935608876 34.72298828896472 16.481298284445426 28 15.10522495080369 29.377315251390485 39.42305981488665 16.09439998291918 29 16.297279168164202 26.47032919716601 38.73769202574933 18.494699608920456 30 17.27324325574609 28.579765636954345 36.48876224570044 17.65822886159912 31 22.298117195756838 27.6115857759495 32.26290580285178 17.827391225441875 32 22.27600999227805 28.663835283986376 32.36641377567906 16.693740948056522 33 21.360718390702342 29.32638416892928 31.380085546426017 17.93281189394236 34 18.03494094663312 29.767638612610625 32.644021536063654 19.5533989046926 35 18.167717611390056 29.00073661024066 32.64246469074825 20.189081087621034 36 22.20470647683236 28.145227868776622 31.79402847514563 17.856037179245384 37 18.909843532597673 30.615318646202898 32.25098481586523 18.2238530053342 38 18.260060779241112 31.578827971261525 29.850729671158682 20.310381578338678 39 18.43634015024002 30.30083589249049 31.618727692630692 19.644096264638794 40 20.331688118512403 28.877301017376173 30.605265873594835 20.18574499051659 41 17.570956561346822 27.568216513591704 32.066076073689494 22.79475085137198 42 19.994164054131957 28.685542155812637 29.552037777073988 21.76825601298142 43 20.600533063835996 28.916578000619182 29.516719629061587 20.966169306483238 44 18.59802965656882 31.402771006736245 30.80578755021938 19.19341178647555 45 18.426109452453055 33.54903795855766 28.294729500350513 19.730123088638766 46 20.40583843682055 31.52384909098026 29.326028318571474 18.744284153627717 47 19.386149236523057 30.366445802211256 30.50500503528256 19.742399925983126 48 20.24099075856621 28.677224153698887 31.600801730856144 19.480983356878763 49 19.180289804531398 27.95235697484494 31.991747830202442 20.87560539042122 50 17.870182230968233 31.189794567588436 31.69145460950761 19.24856859193572 51 17.293170875783314 31.992192643149703 29.891963831369633 20.82267264969735 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2008.0 1 2653.5 2 3299.0 3 35029.0 4 66759.0 5 44056.5 6 21354.0 7 21451.0 8 21548.0 9 22292.0 10 23036.0 11 23156.0 12 23276.0 13 22723.5 14 22171.0 15 21125.5 16 20080.0 17 18745.5 18 17411.0 19 17474.5 20 17538.0 21 17495.5 22 17453.0 23 17946.0 24 18439.0 25 21047.0 26 28191.5 27 32728.0 28 38080.0 29 43432.0 30 49463.5 31 55495.0 32 63840.5 33 72186.0 34 78786.5 35 85387.0 36 91151.5 37 96916.0 38 106425.0 39 115934.0 40 132099.5 41 148265.0 42 167662.0 43 187059.0 44 189752.0 45 192445.0 46 187003.0 47 181561.0 48 172554.5 49 163548.0 50 148329.5 51 133111.0 52 123934.5 53 114758.0 54 102331.5 55 89905.0 56 79406.5 57 68908.0 58 63245.0 59 57582.0 60 50333.5 61 43085.0 62 36124.0 63 29163.0 64 23832.0 65 18501.0 66 13917.5 67 9334.0 68 7333.0 69 5332.0 70 3887.5 71 2443.0 72 1937.5 73 1432.0 74 1159.0 75 622.0 76 358.0 77 264.0 78 170.0 79 138.5 80 107.0 81 76.5 82 46.0 83 30.0 84 14.0 85 11.5 86 9.0 87 5.0 88 1.0 89 2.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2248136.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.31816278200911 #Duplication Level Percentage of deduplicated Percentage of total 1 77.52505072358468 18.85266803179646 2 6.5905594574195066 3.205405954200744 3 2.834577934713187 2.067951829039395 4 1.8172433104556407 1.7676807455270955 5 1.3288744684801155 1.6157892820677644 6 0.9940291651287885 1.4503777828599895 7 0.8135368923642194 1.3848605804378042 8 0.6494304305446318 1.2634363940459694 9 0.5251946316294149 1.1494591689781282 >10 5.074277703544524 28.2880413855637 >50 1.517551532897443 25.927048036873064 >100 0.32577999618042763 10.223767316915984 >500 0.0029666689962067885 0.4912100485478928 >1k 7.416672490516971E-4 0.24840060193228766 >5k 0.0 0.0 >10k+ 1.8541681226292428E-4 2.0639028412137597 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45773 2.0360423034905364 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029313173224395677 0.0 2 0.0 0.0 0.0 0.09323279374557411 0.0 3 0.0 0.0 0.0 0.13740271940843438 0.0 4 0.0 0.0 0.0 0.21173096289548318 0.0 5 0.0 0.0 0.0 0.4063811086162047 0.0 6 0.0 0.0 0.0 0.6745588345189081 0.0 7 0.0 0.0 0.0 0.8752139550276318 0.0 8 0.0 0.0 0.0 1.1736389613439757 0.0 9 0.0 0.0 4.448129472594185E-5 1.3208720468868431 0.0 10 0.0 0.0 8.89625894518837E-5 1.5078714099147026 0.0 11 0.0 0.0 8.89625894518837E-5 1.7099054505599305 0.0 12 0.0 0.0 8.89625894518837E-5 1.868748154026269 0.0 13 0.0 0.0 8.89625894518837E-5 1.942765028450236 0.0 14 0.0 0.0 8.89625894518837E-5 1.98404366995591 0.0 15 0.0 0.0 8.89625894518837E-5 2.0311493610706823 0.0 16 0.0 0.0 8.89625894518837E-5 2.1091695520199845 0.0 17 0.0 0.0 8.89625894518837E-5 2.211609973773829 0.0 18 0.0 0.0 8.89625894518837E-5 2.3424294615628236 0.0 19 0.0 0.0 8.89625894518837E-5 2.425298113637253 0.0 20 0.0 0.0 8.89625894518837E-5 2.5124814513000993 0.0 21 0.0 0.0 8.89625894518837E-5 2.620393072305234 0.0 22 0.0 0.0 8.89625894518837E-5 2.7456523982534864 0.0 23 0.0 0.0 8.89625894518837E-5 2.8810089781045276 0.0 24 0.0 0.0 8.89625894518837E-5 2.9890540429938404 0.0 25 0.0 0.0 8.89625894518837E-5 3.076548749719768 0.0 26 0.0 0.0 8.89625894518837E-5 3.1626200550144654 0.0 27 0.0 0.0 8.89625894518837E-5 3.2496699487931333 0.0 28 0.0 0.0 8.89625894518837E-5 3.3515321137155403 0.0 29 0.0 0.0 8.89625894518837E-5 3.4638918641932697 0.0 30 0.0 0.0 8.89625894518837E-5 3.5999156634651994 0.0 31 0.0 0.0 8.89625894518837E-5 3.7239739944558514 0.0 32 0.0 0.0 8.89625894518837E-5 3.838379884490974 0.0 33 0.0 0.0 8.89625894518837E-5 3.9509175601476065 0.0 34 0.0 0.0 8.89625894518837E-5 4.065012081119647 0.0 35 0.0 0.0 8.89625894518837E-5 4.205839860221979 0.0 36 0.0 0.0 8.89625894518837E-5 4.330387485454617 0.0 37 0.0 0.0 8.89625894518837E-5 4.458760502033685 0.0 38 0.0 0.0 8.89625894518837E-5 4.5952735955476 0.0 39 0.0 0.0 8.89625894518837E-5 4.747399623510321 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGCG 30 2.166431E-6 45.000004 1 TCACGAC 325 0.0 44.307693 25 CGTTTTT 20345 0.0 44.08208 1 CGCACGG 90 0.0 42.5 2 CGGTCTA 335 0.0 42.313435 31 TAGTACG 75 0.0 42.0 1 TCGTCCC 270 0.0 41.666668 38 CGACGGT 350 0.0 41.142857 28 GACGGTC 350 0.0 41.142857 29 CACGACG 350 0.0 40.5 26 ACGGTCT 350 0.0 40.5 30 TGCGTAG 225 0.0 40.0 1 CTATGCG 125 0.0 39.6 1 CTCGTCC 290 0.0 39.56897 37 GTTTTTT 23845 0.0 38.64961 2 GGCGATA 445 0.0 38.426968 8 TAGGGAT 3685 0.0 38.4057 5 AGGGATT 4585 0.0 38.276993 6 GTTAGCG 100 0.0 38.25 1 AAGGGAT 3525 0.0 38.234043 5 >>END_MODULE