##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547716_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1454366 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.70058912268301 31.0 31.0 33.0 30.0 34.0 2 32.08864274879913 33.0 31.0 34.0 30.0 34.0 3 32.14648169717939 33.0 31.0 34.0 30.0 34.0 4 35.85252199240081 37.0 35.0 37.0 35.0 37.0 5 35.789505530244796 37.0 35.0 37.0 35.0 37.0 6 35.849599756870006 37.0 35.0 37.0 35.0 37.0 7 36.14185218851376 37.0 35.0 37.0 35.0 37.0 8 36.0209369580972 37.0 35.0 37.0 35.0 37.0 9 37.797007080748585 39.0 38.0 39.0 35.0 39.0 10 37.47702847838852 39.0 37.0 39.0 35.0 39.0 11 37.18965102319498 39.0 37.0 39.0 34.0 39.0 12 36.49741055552729 38.0 35.0 39.0 33.0 39.0 13 36.24801459880113 38.0 35.0 39.0 32.0 39.0 14 37.212844634706805 39.0 35.0 41.0 33.0 41.0 15 37.425696145261924 39.0 35.0 41.0 33.0 41.0 16 37.52140520336697 39.0 35.0 41.0 33.0 41.0 17 37.42586941663928 39.0 35.0 41.0 33.0 41.0 18 37.29309609823112 39.0 35.0 41.0 33.0 41.0 19 37.272714708677185 39.0 35.0 41.0 33.0 41.0 20 37.17961365983528 39.0 35.0 41.0 33.0 41.0 21 37.03082580313346 39.0 35.0 41.0 32.0 41.0 22 37.00402924710836 38.0 35.0 41.0 32.0 41.0 23 36.93464437424967 38.0 35.0 41.0 32.0 41.0 24 36.93365356450852 38.0 35.0 41.0 32.0 41.0 25 36.86606947632164 38.0 35.0 41.0 32.0 41.0 26 36.81821701002361 38.0 35.0 41.0 32.0 41.0 27 36.74259780550425 38.0 35.0 41.0 32.0 41.0 28 36.72662658505493 38.0 35.0 41.0 32.0 41.0 29 36.678708110613144 38.0 35.0 41.0 32.0 41.0 30 36.684221165786326 38.0 35.0 41.0 32.0 41.0 31 36.523779433787645 38.0 35.0 41.0 31.0 41.0 32 36.3049424972806 38.0 35.0 41.0 31.0 41.0 33 36.200439916774734 38.0 35.0 41.0 30.0 41.0 34 35.98710503408358 38.0 35.0 41.0 30.0 41.0 35 35.859414342744536 38.0 35.0 41.0 30.0 41.0 36 35.79288432210324 38.0 35.0 41.0 30.0 41.0 37 35.559290439958026 38.0 35.0 40.0 29.0 41.0 38 35.65366902141552 38.0 35.0 40.0 29.0 41.0 39 35.599557470402914 38.0 35.0 40.0 29.0 41.0 40 35.47625081994491 38.0 35.0 40.0 28.0 41.0 41 35.435875838681596 38.0 35.0 40.0 28.0 41.0 42 35.44912009769205 38.0 35.0 40.0 29.0 41.0 43 35.37399939217501 38.0 35.0 40.0 28.0 41.0 44 35.239981545223145 37.0 34.0 40.0 27.0 41.0 45 35.218618284530855 37.0 34.0 40.0 27.0 41.0 46 35.04585503236462 37.0 34.0 40.0 27.0 41.0 47 34.92690354422477 37.0 34.0 40.0 26.0 41.0 48 34.808725589019545 37.0 34.0 40.0 26.0 41.0 49 34.89120551498041 36.0 34.0 40.0 27.0 41.0 50 34.76295100408013 36.0 34.0 40.0 26.0 41.0 51 34.18891874535021 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 3.0 11 4.0 12 11.0 13 17.0 14 23.0 15 41.0 16 111.0 17 247.0 18 515.0 19 1045.0 20 1741.0 21 2837.0 22 4421.0 23 6618.0 24 9882.0 25 14712.0 26 19940.0 27 23111.0 28 24073.0 29 26410.0 30 30028.0 31 36178.0 32 46508.0 33 62708.0 34 120646.0 35 207257.0 36 86398.0 37 117611.0 38 195427.0 39 415735.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.86421712278752 22.965814657383355 28.68370135165426 15.48626686817486 2 32.286920898865894 24.561286498721778 29.483362509849652 13.66843009256267 3 28.937901463593068 24.365393580432986 32.260517641364004 14.436187314609942 4 27.198655634138863 26.187080831097536 30.351782151122897 16.262481383640708 5 24.14591650244849 30.823740378969255 30.130517352578373 14.899825766003879 6 22.65832672105921 38.875358747385455 27.446323690185277 11.019990841370054 7 85.239616437678 4.574639396135498 7.924071382306792 2.2616727838797113 8 85.6714197114069 4.113682525581594 7.886804284478598 2.328093478532914 9 81.52184525765867 5.855678694358916 9.260323742441724 3.3621523055406963 10 46.90215530341056 26.01882882300604 17.02439413462636 10.054621738957044 11 39.85874257236486 22.104339622900977 23.644735919294043 14.392181885440117 12 37.55767117768155 21.46564207359083 25.756308934614808 15.220377814112815 13 25.474261637029468 32.212661737141815 25.521911265802416 16.791165360026294 14 16.858067364061043 35.839534202532235 29.634493655654765 17.667904777751957 15 16.735952298114782 25.931918100395634 42.49576791536656 14.836361686123025 16 20.94761566208231 22.655232589320708 40.70089647310237 15.696255275494615 17 21.036314105252735 21.83659408979583 29.550058238435167 27.577033566516267 18 23.260582274338095 25.367204678877258 32.881131709624675 18.491081337159972 19 27.287835386690833 26.696787466153637 27.560462772094507 18.454914375061023 20 29.62988683728855 26.56202083932105 26.610495569890936 17.197596753499464 21 24.64249026723672 26.48439251192616 30.48427974801391 18.388837472823212 22 22.828435208193813 23.446711488029838 30.43284840267168 23.292004901104672 23 20.020751310192892 27.260675785875083 30.46069558831821 22.257877315613815 24 21.9251550160001 24.45388574815418 35.425264341988196 18.19569489385753 25 20.087928348159952 25.37339294235426 33.4174478776319 21.12123083185388 26 18.69770057880891 32.454760356058934 28.198885287472343 20.64865377765982 27 18.260740418849174 32.13881512631621 32.117775030494386 17.482669424340227 28 16.224732976430968 29.327211994779855 35.91833142413945 18.52972360464972 29 18.185381121395853 26.407107976946655 35.87315710075731 19.53435380090019 30 20.179170855204262 28.27665113183339 33.328199366596856 18.215978646365496 31 26.536098891200705 26.040831537590954 28.96794892069809 18.455120650510256 32 27.330190612266787 27.632865454775484 28.221781862337263 16.815162070620463 33 26.20296404068852 28.398078612948872 27.35480614920866 18.044151197153948 34 20.560780436286326 29.087107371872005 29.274336721292986 21.07777547054868 35 20.54950404506156 28.480863826574605 30.296225296795992 20.673406831567846 36 26.524547466043625 27.052681374564585 28.583795275742148 17.838975883649645 37 20.927881977438968 31.44868623166383 29.495395244388277 18.128036546508923 38 21.48585706761572 30.626059740120436 26.081949110471502 21.80613408179234 39 20.796278240827963 30.174935332646662 27.990615842229534 21.038170584295838 40 22.669053044419353 27.87138863257254 28.041428361224064 21.418129961784036 41 18.78137965271465 26.65443224057768 28.913973511481977 25.650214595225684 42 21.990544333407133 27.550974101429766 26.36956584518615 24.088915719976953 43 22.11788504406731 27.396198756021523 27.015276759770234 23.47063944014093 44 19.92600212051162 30.23111101332127 28.43397054111551 21.408916325051603 45 19.82967148571955 33.54932664817522 25.283594363454593 21.337407502650642 46 22.742693379795732 31.258637784436655 26.315177885071574 19.683490950696044 47 21.51686714348383 29.52647407873946 27.102875067211418 21.853783710565292 48 22.82644121218455 26.49401869955706 30.389393041366482 20.29014704689191 49 22.178117475243507 25.634056351702387 30.29808177583909 21.889744397215004 50 20.063725362116553 30.36663398346771 28.708798197977675 20.860842456438064 51 18.965858662812522 32.00006050746511 27.592779259141096 21.44130157058127 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 969.0 1 2205.5 2 3442.0 3 9086.5 4 14731.0 5 10704.0 6 6677.0 7 6708.0 8 6739.0 9 7178.0 10 7617.0 11 7422.5 12 7228.0 13 7216.5 14 7205.0 15 6707.0 16 6209.0 17 5929.5 18 5650.0 19 5860.0 20 6070.0 21 6708.0 22 7346.0 23 7461.0 24 7576.0 25 9390.0 26 13406.5 27 15609.0 28 18324.0 29 21039.0 30 25161.0 31 29283.0 32 33233.5 33 37184.0 34 40029.5 35 42875.0 36 47294.5 37 51714.0 38 57969.5 39 64225.0 40 78292.5 41 92360.0 42 109163.0 43 125966.0 44 130878.5 45 135791.0 46 131442.5 47 127094.0 48 120928.0 49 114762.0 50 103379.0 51 91996.0 52 90223.5 53 88451.0 54 78810.5 55 69170.0 56 64567.0 57 59964.0 58 59037.5 59 58111.0 60 52976.5 61 47842.0 62 40385.0 63 32928.0 64 26956.5 65 20985.0 66 16475.0 67 11965.0 68 9522.0 69 7079.0 70 5285.5 71 3492.0 72 3030.5 73 2569.0 74 2164.5 75 1212.0 76 664.0 77 566.5 78 469.0 79 293.5 80 118.0 81 111.5 82 105.0 83 81.5 84 58.0 85 45.5 86 33.0 87 21.0 88 9.0 89 10.0 90 11.0 91 9.5 92 8.0 93 6.5 94 5.0 95 6.0 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1454366.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.156227865173292 #Duplication Level Percentage of deduplicated Percentage of total 1 81.84514012966656 14.859990138512646 2 5.438186422933521 1.974739037361453 3 1.6177245744779367 0.8811532799193574 4 0.8618851484256016 0.6259433259369569 5 0.5649604286250893 0.5128775138461547 6 0.42836422546483216 0.4666487092096776 7 0.35176020156243815 0.44706468614268385 8 0.3235181016371429 0.46990946974658065 9 0.2980028973262297 0.486954765750318 >10 4.716612917048011 21.503459374922535 >50 2.6058226012152854 34.75411294926677 >100 0.9453540136755945 22.09533967852742 >500 0.0019059556727330535 0.2196031110316569 >1k 3.8119113454661074E-4 0.20077800980234378 >5k 3.8119113454661074E-4 0.5014259500234335 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7245 0.4981552098990213 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2901 0.19946835940884206 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3751696615569946E-4 0.0 0.0 0.009832463080132511 0.0 2 1.3751696615569946E-4 0.0 0.0 0.03369165670814637 0.0 3 1.3751696615569946E-4 0.0 0.0 0.04579314972984792 0.0 4 1.3751696615569946E-4 0.0 0.0 0.07006489425632888 0.0 5 1.3751696615569946E-4 0.0 0.0 0.12410906195551877 0.0 6 1.3751696615569946E-4 0.0 0.0 0.17801571268855296 0.0 7 1.3751696615569946E-4 0.0 0.0 0.2163829462459931 0.0 8 1.3751696615569946E-4 0.0 0.0 0.30439380458564075 0.0 9 1.3751696615569946E-4 0.0 0.0 0.34434248325387146 0.0 10 1.3751696615569946E-4 0.0 0.0 0.4210081918856739 0.0 11 1.3751696615569946E-4 0.0 0.0 0.5585939165244512 0.0 12 1.3751696615569946E-4 0.0 0.0 0.657537373673477 0.0 13 1.3751696615569946E-4 0.0 0.0 0.6989987389694203 0.0 14 1.3751696615569946E-4 0.0 0.0 0.7166696691204277 0.0 15 1.3751696615569946E-4 0.0 0.0 0.744448096283879 0.0 16 1.3751696615569946E-4 0.0 0.0 0.8011050863400272 0.0 17 1.3751696615569946E-4 0.0 0.0 0.8695197770024877 0.0 18 1.3751696615569946E-4 0.0 0.0 0.951754922763596 0.0 19 1.3751696615569946E-4 0.0 0.0 0.9995420685027016 0.0 20 1.3751696615569946E-4 0.0 0.0 1.055992783109616 0.0 21 1.3751696615569946E-4 0.0 0.0 1.1267452621967236 0.0 22 1.3751696615569946E-4 0.0 0.0 1.1996292542592442 0.0 23 1.3751696615569946E-4 0.0 0.0 1.2749885517125676 0.0 24 1.3751696615569946E-4 0.0 0.0 1.3337082962610511 0.0 25 1.3751696615569946E-4 0.0 0.0 1.3920842483941456 0.0 26 1.3751696615569946E-4 0.0 0.0 1.4407652544132632 0.0 27 1.3751696615569946E-4 0.0 0.0 1.4981785877832678 0.0 28 1.3751696615569946E-4 0.0 0.0 1.5562795059840508 0.0 29 1.3751696615569946E-4 0.0 0.0 1.6267569511388467 0.0 30 1.3751696615569946E-4 0.0 0.0 1.7047290709491283 0.0 31 1.3751696615569946E-4 0.0 0.0 1.7789194741901282 0.0 32 1.3751696615569946E-4 0.0 0.0 1.844858859461786 0.0 33 1.3751696615569946E-4 0.0 0.0 1.9170552666935283 0.0 34 1.3751696615569946E-4 0.0 0.0 1.9915894623499175 0.0 35 1.3751696615569946E-4 0.0 0.0 2.0877825801758294 0.0 36 1.3751696615569946E-4 0.0 0.0 2.165342149087644 0.0 37 1.3751696615569946E-4 0.0 0.0 2.25211535473189 0.0 38 1.3751696615569946E-4 0.0 0.0 2.3492023328378138 0.0 39 1.3751696615569946E-4 0.0 0.0 2.4846565445011777 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGAT 20 7.0339034E-4 45.000004 5 GATCGTA 20 7.0339034E-4 45.000004 16 TAGGTCG 40 6.8175723E-9 45.000004 1 CCGGAAT 20 7.0339034E-4 45.000004 43 CGTTCGG 20 7.0339034E-4 45.000004 45 CGCTAAG 20 7.0339034E-4 45.000004 43 AGGTCGT 30 2.1659016E-6 45.000004 14 AATATCG 25 3.8913182E-5 45.0 30 CGAAGGC 25 3.8913182E-5 45.0 23 TCGTTAG 55 1.8189894E-12 44.999996 1 CGGTCTA 260 0.0 44.999996 31 CGTAAGG 170 0.0 43.676468 2 CGACAGG 105 0.0 42.857143 2 CTCACGA 305 0.0 42.786884 24 CGTTTTT 5375 0.0 42.613953 1 GTTAGCG 85 0.0 42.35294 1 TCGTAAG 75 0.0 42.0 1 TCACGAC 300 0.0 41.25 25 CACGACG 290 0.0 41.12069 26 CGAGGGC 285 0.0 41.05263 4 >>END_MODULE