##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547715_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1618549 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.625989698180284 31.0 31.0 33.0 30.0 34.0 2 32.01372525638705 33.0 31.0 34.0 30.0 34.0 3 32.019159135744424 33.0 31.0 34.0 30.0 34.0 4 35.7743923724274 37.0 35.0 37.0 35.0 37.0 5 35.724593447587935 37.0 35.0 37.0 33.0 37.0 6 35.78734471430893 37.0 35.0 37.0 35.0 37.0 7 36.14153417659892 37.0 35.0 37.0 35.0 37.0 8 36.04688211478305 37.0 35.0 37.0 35.0 37.0 9 37.87145832470935 39.0 38.0 39.0 35.0 39.0 10 37.37715200466591 39.0 37.0 39.0 34.0 39.0 11 37.13349796638841 39.0 37.0 39.0 34.0 39.0 12 36.61531655822592 39.0 35.0 39.0 33.0 39.0 13 36.427214746047234 39.0 35.0 39.0 33.0 39.0 14 37.44590556109206 40.0 35.0 41.0 33.0 41.0 15 37.65550749467579 40.0 35.0 41.0 33.0 41.0 16 37.75222745805039 40.0 35.0 41.0 33.0 41.0 17 37.66786609487881 40.0 35.0 41.0 33.0 41.0 18 37.511835600899325 39.0 36.0 41.0 33.0 41.0 19 37.40940929190281 39.0 36.0 41.0 33.0 41.0 20 37.25085307889968 39.0 35.0 41.0 33.0 41.0 21 37.114969024725234 39.0 35.0 41.0 33.0 41.0 22 37.08503665937825 39.0 35.0 41.0 33.0 41.0 23 37.004211179272296 38.0 35.0 41.0 32.0 41.0 24 36.97234004036949 38.0 35.0 41.0 32.0 41.0 25 36.90655024963718 38.0 35.0 41.0 32.0 41.0 26 36.874198433288086 38.0 35.0 41.0 32.0 41.0 27 36.78606640886374 38.0 35.0 41.0 32.0 41.0 28 36.762789387284535 38.0 35.0 41.0 32.0 41.0 29 36.7114674934154 38.0 35.0 41.0 32.0 41.0 30 36.6617754544348 38.0 35.0 41.0 32.0 41.0 31 36.46660187612485 38.0 35.0 41.0 31.0 41.0 32 36.1732582702161 38.0 35.0 41.0 30.0 41.0 33 35.97520989478848 38.0 35.0 41.0 30.0 41.0 34 35.71754824846205 38.0 35.0 41.0 29.0 41.0 35 35.53383802405735 38.0 35.0 41.0 27.0 41.0 36 35.42121245634207 38.0 35.0 41.0 27.0 41.0 37 35.150021408063644 38.0 34.0 40.0 25.0 41.0 38 35.25762951878504 38.0 35.0 40.0 26.0 41.0 39 35.18123949290383 38.0 35.0 40.0 25.0 41.0 40 35.08352048655926 38.0 35.0 40.0 24.0 41.0 41 35.01402923235565 38.0 34.0 40.0 24.0 41.0 42 35.0238133043856 38.0 34.0 40.0 24.0 41.0 43 34.93291707572647 38.0 34.0 40.0 24.0 41.0 44 34.81017503949525 38.0 34.0 40.0 23.0 41.0 45 34.78975860477502 38.0 34.0 40.0 24.0 41.0 46 34.62852097773994 37.0 34.0 40.0 23.0 41.0 47 34.53048131381873 37.0 34.0 40.0 23.0 41.0 48 34.38776892142283 37.0 34.0 40.0 23.0 41.0 49 34.453312812895994 37.0 34.0 40.0 24.0 41.0 50 34.32316661404752 37.0 34.0 40.0 23.0 41.0 51 33.750031664163394 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 2.0 13 2.0 14 8.0 15 30.0 16 80.0 17 223.0 18 552.0 19 1050.0 20 2031.0 21 3465.0 22 5239.0 23 8175.0 24 12454.0 25 19930.0 26 28102.0 27 31967.0 28 31903.0 29 31289.0 30 34859.0 31 41221.0 32 51225.0 33 68224.0 34 120141.0 35 209233.0 36 104319.0 37 133192.0 38 218561.0 39 460967.0 40 104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.019233276224572 23.188423705429987 29.87292939540292 16.919413622942525 2 33.22197845106945 23.97888479125439 30.170603423189533 12.62853333448663 3 27.48727409550159 23.769932204709278 36.144966880829685 12.597826818959451 4 24.940981088617026 26.519431910927626 34.86085376469912 13.678733235756225 5 22.881729252558927 30.250736925480787 33.4854860742554 13.38204774770489 6 21.246066693068915 39.22105540209163 29.831596077721468 9.701281827117993 7 85.8552938465255 3.0544642145526644 9.882678868542133 1.2075630703797045 8 87.3353849651756 2.2677101527355674 9.360235618445904 1.0366692636429296 9 83.40019363022066 3.8314564464838567 10.890371561194625 1.8779783621008694 10 40.89063723124848 25.632649984646743 23.633266586306622 9.843446197798151 11 35.68813795566276 21.364691461302684 27.452860555967103 15.494310027067455 12 33.58928274645995 22.140571586031687 28.86152967874312 15.408615988765245 13 24.138286823568517 31.068259286558515 29.319717846046057 15.473736043826907 14 16.69322337476345 35.055905011216836 31.77852508635821 16.472346527661504 15 15.774746393220102 27.408129132945618 42.2452455872513 14.571878886582985 16 19.851422477787203 24.17609846844303 40.97046181487246 15.002017238897308 17 19.732797709553434 23.415293574677072 31.51161935783223 25.340289357937262 18 21.089074226359536 26.00619443711621 35.399113650559855 17.505617685964403 19 24.445475546307215 26.87314378495801 30.73987874324472 17.94150192549005 20 26.739134867093924 26.72832271373928 29.680164147023042 16.852378272143753 21 22.96544621139057 26.77045921995565 33.42969536294545 16.834399205708323 22 21.916543768523535 22.316840577579054 33.41770931865516 22.348906335242244 23 18.104610981811486 27.418385232699165 33.019451372803665 21.457552412685683 24 18.347421054289985 26.47686291857707 38.20069704408084 16.975018983052102 25 18.09423131459103 27.479489345086243 35.74436115310689 18.681918187215835 26 17.54880451564951 32.98713848020666 30.41415490046949 19.04990210367434 27 17.256691023873852 33.05071394193194 33.38366648152141 16.308928552672793 28 15.242603096971424 29.26485389073794 38.4903391865183 17.002203825772344 29 16.82914758836464 26.94802566990558 38.052477867522086 18.1703488742077 30 18.75958034016888 29.12139206165522 34.878338561266915 17.240689036908986 31 24.65238926964831 27.390829687578194 30.22725910676785 17.729521936005643 32 24.859117641789037 28.479582638523766 30.73407107229994 15.92722864738726 33 23.645129063130003 28.31672071713615 29.990133137767224 18.048017081966623 34 19.084933480543377 29.036501211887934 31.083458084988468 20.795107222580224 35 18.800542955449604 28.68390144505974 32.43256768871378 20.082987910776875 36 24.856090238849735 26.909843322630334 30.8185912196665 17.41547521885343 37 19.487207369069456 30.960323104212478 31.190035025198497 18.36243450151957 38 19.383534264331818 32.05599583330502 27.77691623793904 20.783553664424122 39 19.084130292008457 31.162541263810983 30.234796722249374 19.518531721931186 40 21.928838731481097 28.602717619299757 28.691439060541263 20.777004588677883 41 18.767982927918773 27.0211776103164 30.540070149250965 23.670769312513862 42 20.67858310128393 27.725635739171317 28.58498568779815 23.010795471746608 43 20.899151029718592 27.736015406391772 28.703363321098095 22.661470242791538 44 19.659522201675696 30.272114097256246 30.30763974399292 19.760723957075133 45 18.36632687672724 33.83555270801193 27.608184861873198 20.189935553387635 46 21.273004400855335 31.28746797285717 28.59802205555717 18.841505570730327 47 20.33296489633616 29.835735587862956 28.937585454626337 20.893714061174546 48 20.984350798153162 28.49144511534714 30.99832010028736 19.525883986212342 49 20.72485911764179 26.89995792527752 31.605159930283232 20.77002302679746 50 19.002822898781563 31.6362989319446 29.860140162577714 19.50073800669612 51 18.497864445253125 32.78467318567433 28.414771502129376 20.30269086694317 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1365.0 1 1855.0 2 2345.0 3 18485.5 4 34626.0 5 23326.0 6 12026.0 7 12155.0 8 12284.0 9 12893.0 10 13502.0 11 13606.5 12 13711.0 13 13521.5 14 13332.0 15 12599.0 16 11866.0 17 11541.0 18 11216.0 19 10175.5 20 9135.0 21 8913.5 22 8692.0 23 9826.0 24 10960.0 25 11934.0 26 15782.0 27 18656.0 28 22000.0 29 25344.0 30 29975.5 31 34607.0 32 38917.0 33 43227.0 34 49515.5 35 55804.0 36 59220.0 37 62636.0 38 69876.0 39 77116.0 40 91739.5 41 106363.0 42 126291.0 43 146219.0 44 148188.5 45 150158.0 46 146537.5 47 142917.0 48 135474.5 49 128032.0 50 120714.0 51 113396.0 52 104036.0 53 94676.0 54 84748.0 55 74820.0 56 66029.5 57 57239.0 58 50481.5 59 43724.0 60 37490.0 61 31256.0 62 25879.5 63 20503.0 64 16010.0 65 11517.0 66 8656.5 67 5796.0 68 4393.0 69 2990.0 70 2253.0 71 1516.0 72 1260.0 73 1004.0 74 829.5 75 472.5 76 290.0 77 176.5 78 63.0 79 48.0 80 33.0 81 23.0 82 13.0 83 7.5 84 2.0 85 2.5 86 3.0 87 2.5 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1618549.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.670114893071258 #Duplication Level Percentage of deduplicated Percentage of total 1 79.9116333103383 18.915175417486882 2 6.083297206819421 2.8798468762823033 3 2.351422838676864 1.6697534626101942 4 1.3887861970798492 1.3149091538716613 5 0.9062556349945418 1.0725587501407028 6 0.6749376233189333 0.958551065376936 7 0.5525384159360613 0.9155053451629517 8 0.43918953106610825 0.8316533328135096 9 0.3881711078328789 0.8269249248517497 >10 5.297249345684877 30.0421165656448 >50 1.6434342133051603 27.357316745863606 >100 0.3602133094418398 11.294121998144488 >500 0.0020881930946975032 0.32542008383454823 >1k 5.220482736743758E-4 0.17386218262965988 >5k 0.0 0.0 >10k+ 2.610241368371879E-4 1.422284095285988 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23020 1.4222615441361366 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1733 0.10707121007766833 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03422818833411902 0.0 2 0.0 0.0 0.0 0.09539408445465661 0.0 3 0.0 0.0 0.0 0.14024907494305083 0.0 4 0.0 0.0 0.0 0.18732827983582825 0.0 5 0.0 0.0 0.0 0.31676520142423864 0.0 6 0.0 0.0 0.0 0.47005064412631314 0.0 7 0.0 0.0 0.0 0.5773689891378018 0.0 8 0.0 0.0 0.0 0.7579010582935704 0.0 9 0.0 0.0 0.0 0.8383434792520955 0.0 10 0.0 0.0 0.0 0.9850798462079307 0.0 11 0.0 0.0 0.0 1.2126293365230216 0.0 12 0.0 0.0 0.0 1.3780243909822933 0.0 13 0.0 0.0 0.0 1.4501877916578367 0.0 14 0.0 0.0 0.0 1.4854663034606923 0.0 15 0.0 0.0 0.0 1.5350786414251283 0.0 16 0.0 0.0 0.0 1.6435090936388086 0.0 17 0.0 0.0 0.0 1.7681886677511771 0.0 18 0.0 0.0 0.0 1.9179524376463115 0.0 19 0.0 0.0 0.0 2.012049063698411 0.0 20 6.178373345508848E-5 0.0 0.0 2.1111501721603734 0.0 21 6.178373345508848E-5 0.0 0.0 2.2355826113389217 0.0 22 6.178373345508848E-5 0.0 0.0 2.3744106604125053 0.0 23 6.178373345508848E-5 0.0 0.0 2.5307852897873344 0.0 24 6.178373345508848E-5 0.0 0.0 2.65033681402293 0.0 25 6.178373345508848E-5 0.0 0.0 2.758952617436976 0.0 26 6.178373345508848E-5 0.0 0.0 2.8628110733749796 0.0 27 6.178373345508848E-5 0.0 0.0 2.9751956845297856 0.0 28 6.178373345508848E-5 0.0 0.0 3.081710841006358 0.0 29 6.178373345508848E-5 0.0 0.0 3.214916570335529 0.0 30 6.178373345508848E-5 0.0 0.0 3.370117308774711 0.0 31 6.178373345508848E-5 0.0 0.0 3.510860653585403 0.0 32 6.178373345508848E-5 0.0 0.0 3.633316013293388 0.0 33 6.178373345508848E-5 0.0 0.0 3.7587987759406727 0.0 34 6.178373345508848E-5 0.0 0.0 3.8921898564702087 0.0 35 6.178373345508848E-5 0.0 0.0 4.056287452526924 0.0 36 6.178373345508848E-5 0.0 0.0 4.202467765881663 0.0 37 6.178373345508848E-5 0.0 0.0 4.355444289916462 0.0 38 6.178373345508848E-5 0.0 0.0 4.520097939574273 0.0 39 6.178373345508848E-5 0.0 0.0 4.754999694170519 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGCG 30 2.1660526E-6 45.000004 1 CCGCTCG 60 0.0 45.000004 19 TCGCGAG 30 2.1660526E-6 45.000004 1 TCACCGT 25 3.891514E-5 45.0 24 ATAGCGC 25 3.891514E-5 45.0 18 CGACATA 25 3.891514E-5 45.0 17 CGTCGGA 20 7.034142E-4 45.0 17 CGCGTCA 25 3.891514E-5 45.0 39 ATACGCG 40 6.8175723E-9 45.0 1 TACCGTA 20 7.034142E-4 45.0 40 CGTTTTT 11880 0.0 43.844696 1 CGGTCTA 365 0.0 43.76712 31 CGTATGG 200 0.0 42.75 2 CGACGGT 375 0.0 42.6 28 GACCGAT 280 0.0 42.589283 9 CGTAAGG 230 0.0 42.06522 2 TTTCGCG 75 0.0 42.0 1 CACGACG 385 0.0 41.493504 26 TAGGGTA 1125 0.0 41.4 5 TCGTGCG 50 1.0822987E-9 40.5 1 >>END_MODULE