##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547712_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1348781 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.633754479044413 31.0 31.0 33.0 30.0 34.0 2 32.009280972967446 33.0 31.0 34.0 30.0 34.0 3 32.07579065837968 33.0 31.0 34.0 30.0 34.0 4 35.782151438966 37.0 35.0 37.0 35.0 37.0 5 35.71466828195237 37.0 35.0 37.0 33.0 37.0 6 35.763118697549864 37.0 35.0 37.0 33.0 37.0 7 36.08642173933352 37.0 35.0 37.0 35.0 37.0 8 35.9684181494253 37.0 35.0 37.0 35.0 37.0 9 37.721409924961876 39.0 38.0 39.0 35.0 39.0 10 37.41600674979852 39.0 37.0 39.0 35.0 39.0 11 37.11175498468617 39.0 37.0 39.0 33.0 39.0 12 36.41942020239016 38.0 35.0 39.0 33.0 39.0 13 36.18499741618543 38.0 35.0 39.0 32.0 39.0 14 37.09325976566989 39.0 35.0 41.0 32.0 41.0 15 37.31897098194592 39.0 35.0 41.0 32.0 41.0 16 37.440384317394745 39.0 35.0 41.0 33.0 41.0 17 37.349157498511616 39.0 35.0 41.0 33.0 41.0 18 37.26213373409026 39.0 35.0 41.0 32.0 41.0 19 37.235372532679506 39.0 35.0 41.0 32.0 41.0 20 37.14641368761867 39.0 35.0 41.0 32.0 41.0 21 37.0085343728893 39.0 35.0 41.0 32.0 41.0 22 36.987395285075934 39.0 35.0 41.0 32.0 41.0 23 36.91920259849449 38.0 35.0 41.0 32.0 41.0 24 36.921770843450496 38.0 35.0 41.0 32.0 41.0 25 36.84342750972915 38.0 35.0 41.0 32.0 41.0 26 36.797296225258215 38.0 35.0 41.0 32.0 41.0 27 36.725432816743414 38.0 35.0 41.0 32.0 41.0 28 36.723933685305475 38.0 35.0 41.0 32.0 41.0 29 36.64313702521017 38.0 35.0 41.0 31.0 41.0 30 36.64632286486835 38.0 35.0 41.0 31.0 41.0 31 36.49160612434487 38.0 35.0 41.0 31.0 41.0 32 36.306295091642006 38.0 35.0 41.0 31.0 41.0 33 36.23177521035661 38.0 35.0 41.0 30.0 41.0 34 36.04641302034948 38.0 35.0 41.0 30.0 41.0 35 35.93775861314772 38.0 35.0 41.0 30.0 41.0 36 35.85268549898019 38.0 35.0 41.0 30.0 41.0 37 35.626696995286856 38.0 35.0 40.0 29.0 41.0 38 35.73282319368378 38.0 35.0 40.0 29.0 41.0 39 35.67055066760282 38.0 35.0 40.0 29.0 41.0 40 35.54813420414433 38.0 35.0 40.0 28.0 41.0 41 35.50123407728905 38.0 35.0 40.0 28.0 41.0 42 35.53655041107489 38.0 35.0 40.0 29.0 41.0 43 35.457919410193355 38.0 35.0 40.0 28.0 41.0 44 35.3165562089027 38.0 34.0 40.0 27.0 41.0 45 35.30593254205093 37.0 34.0 40.0 28.0 41.0 46 35.155453702268936 37.0 34.0 40.0 27.0 41.0 47 35.043532641696466 37.0 34.0 40.0 27.0 41.0 48 34.921588456539645 37.0 34.0 40.0 26.0 41.0 49 34.9836726644281 37.0 34.0 40.0 27.0 41.0 50 34.86243726742889 37.0 34.0 40.0 27.0 41.0 51 34.257124025323606 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 10.0 12 7.0 13 10.0 14 17.0 15 57.0 16 96.0 17 264.0 18 481.0 19 1067.0 20 1705.0 21 2870.0 22 4474.0 23 6285.0 24 9285.0 25 13060.0 26 17439.0 27 20679.0 28 22306.0 29 24725.0 30 29075.0 31 35698.0 32 44527.0 33 59698.0 34 111420.0 35 181229.0 36 82247.0 37 111559.0 38 183922.0 39 384465.0 40 97.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.453406446265184 23.657287580415204 28.45903078409319 13.430275189226421 2 32.09957732204116 24.699117202866887 29.483437266687474 13.717868208404477 3 30.420209062850084 24.382905749710293 31.277649966896032 13.919235220543587 4 27.210495996014178 26.677718621481173 30.046464177653746 16.0653212048509 5 24.418790003714467 31.14308401438039 29.159959993505247 15.278165988399897 6 23.23987363404437 39.79563769062583 26.314724184281957 10.649764491047844 7 85.69841953586239 4.865875186557343 7.181373403095091 2.2543318744851835 8 86.29392021388202 4.149376362804636 7.236905027576753 2.319798395736595 9 81.55571586491803 6.476514719587538 8.481584482580939 3.4861849329134977 10 46.32449597080623 30.320415249028564 13.945555282881358 9.409533497283844 11 38.98979893696605 22.232890291307484 23.98543573789963 14.791875033826841 12 36.14767705061088 21.52217446716702 26.99296624136906 15.337182240853037 13 25.355487658856408 31.619736636266378 26.18060307789033 16.844172626986886 14 17.39696807710073 35.398185472660124 30.040903601103512 17.163942849135626 15 16.693295649923893 27.02788666210452 40.955722241045805 15.32309544692578 16 22.022700497708673 23.55400913862221 38.67536686830553 15.747923495363592 17 21.85862641896646 23.479126707745735 28.20443051911318 26.457816354174625 18 23.42411407040876 25.707583366017168 32.039745518360654 18.82855704521342 19 27.369676767392185 26.37930101328533 27.70635114225363 18.54467107706885 20 28.837149989509047 26.81369325338954 27.10832966953123 17.240827087570185 21 25.125872917842113 26.391015294551156 30.186516565698952 18.296595221907783 22 23.09470551557295 23.35783199792998 30.182512950582783 23.36494953591428 23 19.601847890799174 27.478960631859433 30.71358508164038 22.205606395701007 24 21.075845522734973 25.384995785082975 35.10888721000667 18.430271482175385 25 20.541288763705897 26.44550894474344 32.464870130881145 20.54833216066952 26 18.58062947209369 32.25823910627448 27.630134173005104 21.530997248626722 27 18.36324799948991 31.85987940221578 31.447581186271158 18.329291412023153 28 16.712646456318705 29.241959962366014 35.25894863584229 18.786444945472986 29 17.750917309778234 27.253720211064657 34.97387641136701 20.0214860677901 30 20.507999445425167 28.468594975759594 33.03709052841047 17.986315050404773 31 27.10432605441506 26.56724850068321 27.833502992702297 18.49492245219943 32 27.412159572235968 27.823049108787863 27.581720086507744 17.18307123246843 33 26.431496291836854 27.782716393543506 27.175946280382064 18.609841034237583 34 20.50659076603244 28.588703429244628 29.715498661383872 21.189207143339058 35 20.096071934583897 28.362425034160477 30.244198279780036 21.29730475147559 36 26.25363198325006 26.975691383553002 28.895350690734816 17.87532594246212 37 20.735834801943383 31.05789598163082 29.150395801838847 19.055873414586948 38 20.40346060628078 31.445060391568386 26.596089357723752 21.555389644427077 39 20.22003572114376 29.76673010666669 28.853683437118406 21.15955073507115 40 23.097226310275722 27.296425438970452 27.428248173721308 22.17810007703252 41 18.93131649986173 25.344663069838617 29.595686771981516 26.12833365831814 42 21.14931927421872 25.814049871698963 28.337217087132753 24.69941376694956 43 22.021884946481304 26.729839759012027 27.63613959567936 23.61213569882731 44 19.864826091114864 29.41863801462209 29.125039572769783 21.59149632149326 45 19.44207399125581 32.84899475897125 26.089928609611196 21.619002640161746 46 21.946038682336123 30.246125946317452 27.502611617453095 20.30522375389333 47 20.926599648126714 29.273247473088666 27.493418130890042 22.30673474789458 48 21.910228569352622 27.458201146071897 30.302843827129834 20.328726457445647 49 21.57132996387108 25.251022960732687 31.1266247077917 22.051022367604524 50 20.02422928555488 29.737073698398774 29.048970885562593 21.18972613048375 51 18.859696273894723 31.68490659343511 27.64948497939992 21.80591215327025 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 807.0 1 1720.0 2 2633.0 3 6954.5 4 11276.0 5 8219.5 6 5163.0 7 5245.5 8 5328.0 9 5562.5 10 5797.0 11 5753.5 12 5710.0 13 5394.0 14 5078.0 15 4969.5 16 4861.0 17 4902.5 18 4944.0 19 5021.5 20 5099.0 21 5532.0 22 5965.0 23 7303.5 24 8642.0 25 10190.0 26 13839.5 27 15941.0 28 16964.0 29 17987.0 30 22121.0 31 26255.0 32 29786.0 33 33317.0 34 37647.5 35 41978.0 36 46077.0 37 50176.0 38 55911.0 39 61646.0 40 77251.0 41 92856.0 42 105942.0 43 119028.0 44 124830.5 45 130633.0 46 121078.0 47 111523.0 48 107937.0 49 104351.0 50 99087.0 51 93823.0 52 87050.0 53 80277.0 54 73928.0 55 67579.0 56 63726.0 57 59873.0 58 54588.5 59 49304.0 60 43268.5 61 37233.0 62 32752.0 63 28271.0 64 23719.5 65 19168.0 66 15144.0 67 11120.0 68 8625.0 69 6130.0 70 4645.5 71 3161.0 72 2612.0 73 2063.0 74 1570.5 75 796.0 76 514.0 77 386.0 78 258.0 79 176.5 80 95.0 81 71.5 82 48.0 83 37.0 84 26.0 85 17.5 86 9.0 87 8.5 88 8.0 89 5.5 90 3.0 91 3.0 92 3.0 93 3.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1348781.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.82928053994325 #Duplication Level Percentage of deduplicated Percentage of total 1 81.07990639953717 16.077562101487626 2 5.632429795522527 2.233740610739028 3 1.7749522727999119 1.0558807968707804 4 1.0157052351170661 0.8056281621210131 5 0.6293425137710055 0.6239704630639183 6 0.5014823125075618 0.5966420076319162 7 0.3977143275061134 0.5520472282411515 8 0.34734136123733106 0.5510023436080647 9 0.31109284421635547 0.5551872553741477 >10 5.215731083758248 26.672916988416002 >50 2.542607541709696 35.97908929572988 >100 0.5494378938617189 13.576042530138862 >500 0.0015042789701895105 0.17688460438163267 >1k 3.760697425473776E-4 0.10641413594122676 >5k 3.760697425473776E-4 0.4369914762547924 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5860 0.43446638112488234 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1427 0.10579923649576914 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4828204133955031E-4 0.0 0.0 0.02891499806121231 0.0 2 1.4828204133955031E-4 0.0 0.0 0.08140684069541312 0.0 3 1.4828204133955031E-4 0.0 0.0 0.1115822361080116 0.0 4 1.4828204133955031E-4 0.0 0.0 0.15161838726969018 0.0 5 1.4828204133955031E-4 0.0 0.0 0.25793661091014775 0.0 6 1.4828204133955031E-4 0.0 0.0 0.3572114375869767 0.0 7 1.4828204133955031E-4 0.0 0.0 0.4232710870037463 0.0 8 1.4828204133955031E-4 0.0 0.0 0.5527213090931737 0.0 9 1.4828204133955031E-4 0.0 0.0 0.6056579978513932 0.0 10 1.4828204133955031E-4 0.0 0.0 0.70233788880478 0.0 11 1.4828204133955031E-4 0.0 0.0 0.8661154034643134 0.0 12 1.4828204133955031E-4 0.0 0.0 1.0039435608894254 0.0 13 1.4828204133955031E-4 0.0 0.0 1.062440826197878 0.0 14 1.4828204133955031E-4 0.0 0.0 1.0925420805898067 0.0 15 1.4828204133955031E-4 0.0 0.0 1.1357662956402856 0.0 16 1.4828204133955031E-4 0.0 0.0 1.2178404055217267 0.0 17 1.4828204133955031E-4 0.0 0.0 1.315039283619802 0.0 18 1.4828204133955031E-4 0.0 0.0 1.4322562372987164 0.0 19 1.4828204133955031E-4 0.0 0.0 1.5040247453070588 0.0 20 1.4828204133955031E-4 0.0 0.0 1.585728150085151 0.0 21 1.4828204133955031E-4 0.0 0.0 1.6876720535060918 0.0 22 1.4828204133955031E-4 0.0 0.0 1.7976231871593684 0.0 23 1.4828204133955031E-4 0.0 0.0 1.914840140838283 0.0 24 1.4828204133955031E-4 0.0 0.0 2.0009178658358917 0.0 25 1.4828204133955031E-4 0.0 0.0 2.0795073477458534 0.0 26 1.4828204133955031E-4 0.0 0.0 2.161655598647964 0.0 27 1.4828204133955031E-4 0.0 0.0 2.2663427198336867 0.0 28 1.4828204133955031E-4 0.0 0.0 2.3585741495468873 0.0 29 1.4828204133955031E-4 0.0 0.0 2.4666717576834194 0.0 30 1.4828204133955031E-4 0.0 0.0 2.5950098644628 0.0 31 1.4828204133955031E-4 0.0 0.0 2.701476370144597 0.0 32 2.2242306200932546E-4 0.0 0.0 2.7999356455940587 0.0 33 2.2242306200932546E-4 0.0 0.0 2.9021019720770087 0.0 34 2.2242306200932546E-4 0.0 0.0 3.022729412706733 0.0 35 2.2242306200932546E-4 0.0 0.0 3.173087402625037 0.0 36 2.2242306200932546E-4 0.0 0.0 3.29082334344864 0.0 37 2.2242306200932546E-4 0.0 0.0 3.4231650653441887 0.0 38 2.2242306200932546E-4 0.0 0.0 3.5823458367221956 0.0 39 2.2242306200932546E-4 0.0 0.0 3.895220943948647 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCATT 25 3.891166E-5 45.000004 27 CTCGGTA 30 2.1657834E-6 45.000004 28 ATATACG 35 1.2121382E-7 45.000004 1 CGACTTA 30 2.1657834E-6 45.000004 19 CGCGGAT 20 7.0337235E-4 45.0 45 CTATCGC 20 7.0337235E-4 45.0 44 CCGGCTA 20 7.0337235E-4 45.0 33 TTCGTAG 45 3.8562575E-10 45.0 1 TGTCGGT 20 7.0337235E-4 45.0 36 GCGTAAA 20 7.0337235E-4 45.0 21 CACGACG 375 0.0 44.999996 26 CGACGGT 380 0.0 44.407894 28 ACGACGG 395 0.0 42.72152 27 CGTAAGG 190 0.0 42.63158 2 CGGTCTA 405 0.0 42.22222 31 TTAAGCG 75 0.0 42.0 1 CGTTTTT 4045 0.0 41.82942 1 ACGGTCT 405 0.0 41.666664 30 TACGGGT 60 3.6379788E-12 41.250004 4 GCGCGAC 95 0.0 40.263157 9 >>END_MODULE