##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547711_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2499503 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.68174513093203 31.0 31.0 33.0 30.0 34.0 2 32.074636837803354 33.0 31.0 34.0 30.0 34.0 3 32.058221974528536 33.0 31.0 34.0 30.0 34.0 4 35.80275518773132 37.0 35.0 37.0 35.0 37.0 5 35.76586785452948 37.0 35.0 37.0 35.0 37.0 6 35.828781561774484 37.0 35.0 37.0 35.0 37.0 7 36.15726406409594 37.0 35.0 37.0 35.0 37.0 8 36.05211836113019 37.0 35.0 37.0 35.0 37.0 9 37.845620109277725 39.0 38.0 39.0 35.0 39.0 10 37.5091804250685 39.0 37.0 39.0 35.0 39.0 11 37.228982721765085 39.0 37.0 39.0 34.0 39.0 12 36.877020751725446 39.0 35.0 39.0 33.0 39.0 13 36.77556818295477 39.0 35.0 39.0 33.0 39.0 14 37.90437618998657 40.0 36.0 41.0 33.0 41.0 15 38.05012116408742 40.0 36.0 41.0 33.0 41.0 16 38.0917558410612 40.0 36.0 41.0 33.0 41.0 17 37.98513544492645 40.0 36.0 41.0 33.0 41.0 18 37.795766998479294 39.0 36.0 41.0 33.0 41.0 19 37.70139023637899 39.0 36.0 41.0 33.0 41.0 20 37.54457546160177 39.0 35.0 41.0 33.0 41.0 21 37.430323548321404 39.0 35.0 41.0 33.0 41.0 22 37.38339501892976 39.0 35.0 41.0 33.0 41.0 23 37.27889744481203 39.0 35.0 41.0 33.0 41.0 24 37.24450460751597 39.0 35.0 41.0 33.0 41.0 25 37.16616903440404 39.0 35.0 41.0 33.0 41.0 26 37.14652872991151 39.0 35.0 41.0 33.0 41.0 27 37.05079089723037 39.0 35.0 41.0 32.0 41.0 28 37.0138395513028 39.0 35.0 41.0 32.0 41.0 29 36.93686344845355 39.0 35.0 41.0 32.0 41.0 30 36.88304875009152 39.0 35.0 41.0 32.0 41.0 31 36.71184631504743 39.0 35.0 41.0 31.0 41.0 32 36.41648799781397 39.0 35.0 41.0 30.0 41.0 33 36.21113437351345 39.0 35.0 41.0 30.0 41.0 34 35.90548841109612 39.0 35.0 41.0 29.0 41.0 35 35.69164309864801 39.0 35.0 41.0 27.0 41.0 36 35.56837779350535 39.0 35.0 41.0 26.0 41.0 37 35.335767550589054 38.0 35.0 41.0 24.0 41.0 38 35.414161135233684 39.0 35.0 41.0 25.0 41.0 39 35.3268261730432 38.0 35.0 41.0 24.0 41.0 40 35.23855102394356 38.0 35.0 41.0 24.0 41.0 41 35.157394490024615 38.0 35.0 41.0 24.0 41.0 42 35.162272259725235 38.0 35.0 41.0 24.0 41.0 43 35.065712263598 38.0 35.0 40.0 23.0 41.0 44 34.938064887299596 38.0 34.0 40.0 23.0 41.0 45 34.91778045475441 38.0 34.0 40.0 23.0 41.0 46 34.73609113491762 38.0 34.0 40.0 23.0 41.0 47 34.631793200488254 38.0 34.0 40.0 23.0 41.0 48 34.506515895359996 38.0 34.0 40.0 23.0 41.0 49 34.55414536409838 38.0 34.0 40.0 23.0 41.0 50 34.45179101605399 37.0 34.0 40.0 23.0 41.0 51 33.87668108419954 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 8.0 13 14.0 14 25.0 15 58.0 16 155.0 17 385.0 18 919.0 19 1784.0 20 3300.0 21 5483.0 22 8447.0 23 12613.0 24 19622.0 25 30847.0 26 44625.0 27 50605.0 28 49418.0 29 48310.0 30 51922.0 31 60020.0 32 72884.0 33 94782.0 34 158531.0 35 251842.0 36 166245.0 37 219725.0 38 365716.0 39 781019.0 40 193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.975637956825818 22.998172036600874 28.179842152619937 17.846347853953365 2 34.877613669597515 23.508073404992913 28.235373192190604 13.378939733218964 3 27.316910601827644 23.963804004236042 36.347865955752 12.371419438184311 4 25.10671121418938 25.71203155187251 34.31586199336428 14.865395240573825 5 22.600012882561053 30.94215129967838 33.04540942739417 13.412426390366406 6 20.97693021372649 39.43668001198638 29.84477314090041 9.741616633386716 7 83.3234847087601 3.3746308766182715 10.995465898620646 2.306418516000981 8 84.01762270339344 2.8889743280964253 11.566699459852618 1.5267035086575211 9 79.92688946562576 5.520657506712334 12.239113135691374 2.3133398919705237 10 38.85224382607262 37.24332397280579 16.179336452086677 7.7250957490349075 11 28.834052209579262 23.643020232422206 31.917065112544375 15.605862445454155 12 28.089264145712168 21.9188774728416 33.1046211986943 16.88723718275193 13 23.357243419991892 26.759799848209827 32.39996111226912 17.482995619529163 14 16.72620516958771 30.963435530983556 33.68633684376454 18.624022455664186 15 16.378456037060168 27.783803420119916 40.4032721705075 15.434468372312416 16 21.916276955858823 25.781325327475102 37.55166527105588 14.750732445610188 17 20.971889211575263 24.996889381609062 32.00824323875586 22.022978168059808 18 21.04146304285292 27.11038954544163 34.915301161870985 16.93284624983447 19 23.284348928567 26.98564474617554 32.40980306885008 17.320203256407375 20 25.016173215235188 27.750396778879644 32.09638076049519 15.137049245389983 21 23.747480999222645 26.387165768554787 33.53154607135899 16.333807160863582 22 22.842821152845186 22.7129553355207 34.631844810748376 19.812378700885734 23 18.973932017685115 26.706309214271794 34.66889217576454 19.650866592278547 24 18.677633113462957 26.577883683276237 37.485012020389654 17.259471182871156 25 18.879633271094292 28.609727613849635 34.54326720151966 17.96737191353641 26 18.58801529744113 31.621166287858028 31.212405026119193 18.578413388581648 27 17.416102321141445 30.592041697889538 34.78759577403988 17.20426020692914 28 17.041067764271535 27.851056790089867 37.862287022660105 17.24558842297849 29 17.365332228046938 26.9761628611768 37.234722262785844 18.423782647990418 30 18.73892529834931 28.135953427541395 35.26917151129644 17.85594976281285 31 23.323036619679993 26.540316214863513 31.811204067368593 18.3254430980879 32 22.65718424822855 28.19728562038133 32.20156167046009 16.943968460930034 33 22.368046767697418 27.67834245447995 31.05753423780648 18.896076540016153 34 19.357928356157203 28.36747945491564 32.507222435820246 19.767369753106916 35 19.73172266646609 28.083823064025125 32.512423469785794 19.672030799722982 36 22.682389258984685 27.317230665456293 31.985398697261015 18.014981378298007 37 19.8623886428622 30.250533806120654 31.109264521786933 18.777813029230213 38 19.716439628198085 30.993281464355114 29.250134926823453 20.04014398062335 39 19.566689857943757 30.142752379172983 30.499423285349124 19.791134477534133 40 21.27326912590223 27.47542211391625 30.803723780287523 20.447584979894003 41 18.67291217494038 27.60740835278053 31.115785818220665 22.603893654058428 42 20.0549069154948 27.54951684394858 29.730310385704676 22.665265854851945 43 20.448585178733534 28.406167146028633 29.836291454741204 21.308956220496636 44 19.782332727746276 29.91578725850699 30.333830365476654 19.968049648270075 45 19.36845044794905 31.678457677386263 28.68378233592838 20.2693095387363 46 21.138922417776655 30.534230204964746 29.284701798717585 19.042145578541014 47 19.95344674521295 29.206726297187878 30.442972062846096 20.396854894753076 48 20.35128583562412 28.42040997750353 31.499062013528288 19.729242173344062 49 20.43450237907296 27.54587612017269 31.56731558233777 20.45230591841658 50 19.11920089713835 30.13014987379491 30.614686199616486 20.135963029450256 51 18.679633511142015 31.10070281972056 29.71490732357593 20.504756345561496 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1944.0 1 2984.5 2 4025.0 3 31416.5 4 58808.0 5 40002.5 6 21197.0 7 21072.0 8 20947.0 9 21592.5 10 22238.0 11 22488.5 12 22739.0 13 21776.5 14 20814.0 15 19987.5 16 19161.0 17 18197.0 18 17233.0 19 16729.0 20 16225.0 21 16461.5 22 16698.0 23 18539.0 24 20380.0 25 23569.0 26 31001.0 27 35244.0 28 42391.5 29 49539.0 30 61232.5 31 72926.0 32 77649.0 33 82372.0 34 89927.5 35 97483.0 36 102382.0 37 107281.0 38 119617.0 39 131953.0 40 146050.0 41 160147.0 42 173048.5 43 185950.0 44 190110.5 45 194271.0 46 191521.0 47 188771.0 48 180842.5 49 172914.0 50 163977.0 51 155040.0 52 144882.5 53 134725.0 54 124073.5 55 113422.0 56 103031.0 57 92640.0 58 81695.5 59 70751.0 60 64198.5 61 57646.0 62 48671.5 63 39697.0 64 34323.5 65 28950.0 66 23336.0 67 17722.0 68 13706.5 69 9691.0 70 7495.0 71 5299.0 72 4098.0 73 2897.0 74 2141.5 75 1120.0 76 854.0 77 635.5 78 417.0 79 266.5 80 116.0 81 128.0 82 140.0 83 92.0 84 44.0 85 29.5 86 15.0 87 12.5 88 10.0 89 8.0 90 6.0 91 6.5 92 7.0 93 7.0 94 7.0 95 4.0 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2499503.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.57901098379631 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91906215754287 16.446552579547745 2 5.651942805714874 2.3262278615718985 3 2.0822632826288845 1.285527568931267 4 1.2485225313954618 1.0277343554841751 5 0.8644447331190352 0.8894708828870745 6 0.6818151834171657 0.8418649289076571 7 0.5522930805689494 0.7955951759912178 8 0.44424817032475816 0.7313750381315689 9 0.39412224769189874 0.7299581457789065 >10 5.588829262698609 28.579716187884824 >50 2.047643354977606 29.686935282662475 >100 0.5208834897549178 13.937586431687746 >500 0.002554305107236734 0.36884507277598183 >1k 9.824250412448978E-4 0.34001515204705446 >5k 0.0 0.0 >10k+ 3.92970016497959E-4 2.012595335710559 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37169 1.4870556266585797 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 12605 0.5043002548906722 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 2806 0.11226231774876846 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.001590716234387E-5 0.0 0.0 0.01200238607435158 0.0 2 8.001590716234387E-5 0.0 0.0 0.04764947271517578 0.0 3 8.001590716234387E-5 0.0 0.0 0.07577506408273965 0.0 4 8.001590716234387E-5 0.0 0.0 0.11046195983761571 0.0 5 8.001590716234387E-5 0.0 0.0 0.20676110410749657 0.0 6 8.001590716234387E-5 0.0 0.0 0.34750908480605947 0.0 7 8.001590716234387E-5 0.0 0.0 0.45016949369534665 0.0 8 8.001590716234387E-5 0.0 0.0 0.6064405603834042 0.0 9 8.001590716234387E-5 0.0 0.0 0.702499656931798 0.0 10 8.001590716234387E-5 0.0 0.0 0.812081441790628 0.0 11 8.001590716234387E-5 0.0 0.0 0.9545897724467625 0.0 12 8.001590716234387E-5 0.0 0.0 1.060370801715381 0.0 13 8.001590716234387E-5 0.0 0.0 1.1205427639014636 0.0 14 8.001590716234387E-5 0.0 0.0 1.1453877030753714 0.0 15 8.001590716234387E-5 0.0 0.0 1.1854356646101245 0.0 16 8.001590716234387E-5 0.0 0.0 1.228804286292115 0.0 17 8.001590716234387E-5 0.0 0.0 1.2842953179092003 0.0 18 1.2002386074351581E-4 0.0 0.0 1.3529889742080725 0.0 19 1.2002386074351581E-4 0.0 0.0 1.3986780571977708 0.0 20 1.2002386074351581E-4 0.0 0.0 1.453849025186207 0.0 21 1.2002386074351581E-4 0.0 0.0 1.514821146443913 0.0 22 1.2002386074351581E-4 0.0 0.0 1.5844749936287335 0.0 23 1.2002386074351581E-4 0.0 0.0 1.6612102485974212 0.0 24 1.2002386074351581E-4 0.0 0.0 1.7227024732516825 0.0 25 1.2002386074351581E-4 0.0 0.0 1.7989576327773962 0.0 26 1.2002386074351581E-4 0.0 0.0 1.851047988340082 0.0 27 1.2002386074351581E-4 0.0 0.0 1.9113799823404893 0.0 28 1.2002386074351581E-4 0.0 0.0 1.972712175180426 0.0 29 1.2002386074351581E-4 0.0 0.0 2.039485449707402 0.0 30 1.2002386074351581E-4 0.0 0.0 2.122982048831308 0.0 31 1.2002386074351581E-4 0.0 0.0 2.1964766595599206 0.0 32 1.2002386074351581E-4 0.0 0.0 2.2827338074809274 0.0 33 1.2002386074351581E-4 0.0 0.0 2.349467074054322 0.0 34 1.2002386074351581E-4 0.0 0.0 2.448606783028466 0.0 35 1.2002386074351581E-4 0.0 0.0 2.535864129789002 0.0 36 1.2002386074351581E-4 0.0 0.0 2.6147998222046542 0.0 37 1.2002386074351581E-4 0.0 0.0 2.705057765483778 0.0 38 1.2002386074351581E-4 0.0 0.0 2.8001166631926426 0.0 39 1.2002386074351581E-4 0.0 0.0 2.93146277479963 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 85 0.0 45.0 1 CGACGGT 395 0.0 43.86076 28 CGTTTTT 20280 0.0 43.768494 1 CGGTCTA 410 0.0 42.804874 31 CACGACG 420 0.0 40.714287 26 GCGCGAC 90 0.0 40.0 9 TCACGAC 425 0.0 39.70588 25 CTCAACT 2550 0.0 39.617645 2 ACGGTCT 450 0.0 39.5 30 ACGGGAC 885 0.0 39.152542 5 GCATTAG 2505 0.0 39.071857 16 GACGGTC 455 0.0 39.065933 29 ACTTGAC 2565 0.0 39.035088 6 CGCATCG 75 0.0 39.0 21 ACGGGTA 110 0.0 38.863636 5 TTGACCC 2565 0.0 38.596493 8 CTATGCG 105 0.0 38.57143 1 CCGCTCG 105 0.0 38.57143 19 AGGGATT 5510 0.0 38.384758 6 GCTCAAC 2665 0.0 38.24578 1 >>END_MODULE