SRR1547710_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547710_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1467707
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6464	0.44041487844644744	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3953	0.26933168541132524	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGCA	20	7.033927E-4	45.0	22
TACCCGT	25	3.8913357E-5	45.0	36
CGTATTA	20	7.033927E-4	45.0	44
CGAGTTA	20	7.033927E-4	45.0	14
CGTGATA	20	7.033927E-4	45.0	13
TTACTCG	20	7.033927E-4	45.0	23
CACGAGA	20	7.033927E-4	45.0	16
CACGACT	40	6.8175723E-9	45.0	26
CTTATCG	20	7.033927E-4	45.0	41
CTACGCG	35	1.2122291E-7	45.0	1
CGAGGTA	25	3.8913357E-5	45.0	42
CATACGT	20	7.033927E-4	45.0	42
GTATCGA	25	3.8913357E-5	45.0	26
ACTCGAA	20	7.033927E-4	45.0	25
TCGTAAT	25	3.8913357E-5	45.0	40
ACGTCGT	20	7.033927E-4	45.0	27
ACGTCGA	25	3.8913357E-5	45.0	33
GCGGACC	25	3.8913357E-5	45.0	5
GACGCAA	40	6.8175723E-9	45.0	1
CACGTAA	45	3.8562575E-10	45.0	34