##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547709_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1886443 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.66778482042659 31.0 31.0 33.0 30.0 34.0 2 32.048279221794665 33.0 31.0 34.0 30.0 34.0 3 32.104161111679495 33.0 31.0 34.0 30.0 34.0 4 35.798801766075094 37.0 35.0 37.0 35.0 37.0 5 35.72286202127496 37.0 35.0 37.0 33.0 37.0 6 35.78964644041723 37.0 35.0 37.0 35.0 37.0 7 36.15305471726418 37.0 35.0 37.0 35.0 37.0 8 36.05276332229492 37.0 35.0 37.0 35.0 37.0 9 37.86959107696337 39.0 38.0 39.0 35.0 39.0 10 37.48375275584791 39.0 37.0 39.0 35.0 39.0 11 37.1156175935345 39.0 37.0 39.0 33.0 39.0 12 36.439725451550885 38.0 35.0 39.0 33.0 39.0 13 36.20503614474437 38.0 35.0 39.0 32.0 39.0 14 37.184560572463624 39.0 35.0 41.0 32.0 41.0 15 37.410732261722195 39.0 35.0 41.0 33.0 41.0 16 37.54863942350763 39.0 35.0 41.0 33.0 41.0 17 37.452465301098414 39.0 35.0 41.0 33.0 41.0 18 37.35647141207023 39.0 35.0 41.0 33.0 41.0 19 37.343321266531774 39.0 35.0 41.0 33.0 41.0 20 37.24365485731612 39.0 35.0 41.0 33.0 41.0 21 37.07916433202593 39.0 35.0 41.0 32.0 41.0 22 37.032673131390666 39.0 35.0 41.0 32.0 41.0 23 36.98112744461402 38.0 35.0 41.0 32.0 41.0 24 36.97253561332094 38.0 35.0 41.0 32.0 41.0 25 36.89115494080659 38.0 35.0 41.0 32.0 41.0 26 36.85833232172931 38.0 35.0 41.0 32.0 41.0 27 36.76413758592229 38.0 35.0 41.0 32.0 41.0 28 36.775292441913166 38.0 35.0 41.0 32.0 41.0 29 36.74098925862059 38.0 35.0 41.0 32.0 41.0 30 36.751036739514525 38.0 35.0 41.0 32.0 41.0 31 36.62327194619716 38.0 35.0 41.0 31.0 41.0 32 36.421709534822945 38.0 35.0 41.0 31.0 41.0 33 36.34321153620862 38.0 35.0 41.0 31.0 41.0 34 36.15906019953956 38.0 35.0 41.0 30.0 41.0 35 36.07268123129085 38.0 35.0 41.0 30.0 41.0 36 36.00519655245348 38.0 35.0 41.0 30.0 41.0 37 35.741560704458074 38.0 35.0 41.0 29.0 41.0 38 35.862601202368694 38.0 35.0 40.0 30.0 41.0 39 35.81576331752404 38.0 35.0 40.0 30.0 41.0 40 35.70478514325638 38.0 35.0 40.0 29.0 41.0 41 35.66126938370255 38.0 35.0 40.0 29.0 41.0 42 35.688671218796436 38.0 35.0 40.0 29.0 41.0 43 35.59397501011162 38.0 35.0 40.0 29.0 41.0 44 35.465608025262355 38.0 34.0 40.0 29.0 41.0 45 35.430831994393685 38.0 34.0 40.0 29.0 41.0 46 35.26600167617045 37.0 34.0 40.0 28.0 41.0 47 35.169208399087594 37.0 34.0 40.0 27.0 41.0 48 35.05768687418597 37.0 34.0 40.0 27.0 41.0 49 35.141809744582794 37.0 34.0 40.0 28.0 41.0 50 35.01306161914248 37.0 34.0 40.0 27.0 41.0 51 34.3964747410868 36.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 9.0 13 11.0 14 12.0 15 45.0 16 101.0 17 242.0 18 561.0 19 1064.0 20 2032.0 21 3333.0 22 5208.0 23 7786.0 24 11627.0 25 17075.0 26 23453.0 27 27776.0 28 29865.0 29 33290.0 30 38886.0 31 47692.0 32 61227.0 33 82440.0 34 153036.0 35 267300.0 36 115358.0 37 152329.0 38 254779.0 39 549763.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.90088436279283 23.961550918845678 30.548921965837295 13.588642752524194 2 30.828760794786803 25.249636485173422 30.7763870946538 13.145215625385978 3 29.16398746211786 25.36657614356755 32.130098815601634 13.339337578712954 4 26.543076043113945 26.872638081299037 31.580917101656397 15.00336877393062 5 23.413588430713254 32.739764731825986 29.823164548305993 14.023482289154773 6 22.366220447689116 40.60626268591206 26.415322381858342 10.612194484540481 7 89.07997750263327 3.451045168075579 6.134826231166275 1.3341510981248836 8 90.57686874185968 2.4027760181463207 5.601706492059395 1.418648747934605 9 87.02770240076164 4.5999269524708675 6.493013571043493 1.8793570757239948 10 48.24715085480982 33.75649304007595 10.662447791955548 7.3339083131586795 11 37.47354147461651 22.59257237032871 25.179769545117452 14.754116609937325 12 35.70661822276104 22.287924946579356 26.26901528432081 15.736441546338797 13 24.362305142535448 33.50437834591345 26.417283745122432 15.71603276642867 14 15.527900922529861 38.386370539687654 28.71239682301559 17.37333171476689 15 14.583478005961483 28.06853957421454 42.49145084161037 14.8565315782136 16 19.307182883341824 24.212393377377424 40.398888278097985 16.081535461182767 17 19.511641751168735 23.537366355622723 28.614434679446983 28.33655721376156 18 21.464523444387133 26.24070804153637 33.27362660838414 19.021141905692353 19 26.11926254861663 26.896704538647604 28.707678949218185 18.276353963517582 20 28.582840827949745 26.41500432295065 27.12740326635896 17.87475158274064 21 24.126093393757458 26.88345208416051 30.86989641351475 18.120558108567288 22 22.64330276610531 23.20653208180687 30.048085205860975 24.10207994622684 23 18.70573348889948 28.178640966093333 29.942436638689852 23.17318890631734 24 19.03169085946408 26.25099194621836 36.67637983230874 18.04093736200882 25 17.837909759266513 27.927533458471842 34.507059052407094 19.727497729854544 26 17.712382510364744 34.34935484401066 28.05258361901208 19.885679026612518 27 17.556427625960605 33.73300969072482 31.788821607649954 16.921741075664624 28 15.168229307750089 30.282759669918462 37.47651002442162 17.072500997909824 29 16.66093277135858 26.712813480184668 37.329513799250755 19.296739949205993 30 18.133757553236435 28.89326632185547 34.14876569289398 18.824210432014112 31 25.99134985790718 27.127880354720496 27.915977318159097 18.964792469213222 32 26.203707188608398 27.972326754638228 29.076574272320975 16.747391784432395 33 25.616570445012123 27.552754045576783 27.66985273342476 19.16082277598634 34 20.193135970713136 29.51098973040797 29.111348712895115 21.184525585983778 35 19.167873081773475 28.436639750048105 30.55549518326289 21.839991984915528 36 26.379593764561132 25.834334777144075 29.570148687238362 18.215922771056427 37 19.936356412571172 31.66244620166101 30.145358221796258 18.25583916397156 38 18.838152014134536 32.663165544890575 26.920028858544892 21.57865358243 39 19.312695904408457 30.936158685950225 29.43327733729564 20.31786807234568 40 22.51878270374456 27.929865890461574 27.91359187635142 21.637759529442448 41 18.46093414961385 25.928639243274247 29.661696642835217 25.948729964276684 42 21.110364850673992 26.562477636483052 27.728587611711564 24.59856990113139 43 21.52749910810981 26.831025374209556 27.460198903438904 24.181276614241725 44 19.686521140580446 30.152832606126978 29.500334757000346 20.660311496292227 45 18.549195496497905 34.19154461597832 26.42247870728138 20.83678118024239 46 21.692359641929283 31.255277789999486 27.532716334392294 19.519646233678937 47 20.745021185373744 29.507915160966963 27.655116004035108 22.091947649624185 48 21.725649807600867 27.284736406029758 30.605059363044628 20.384554423324744 49 21.19003860705041 25.644559628888867 31.562416675192413 21.60298508886831 50 19.362472123461984 31.102238445582508 29.437624142367408 20.0976652885881 51 19.04186874451017 32.69910620145957 26.76635339631253 21.492671657717725 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1291.0 1 2194.5 2 3098.0 3 9734.0 4 16370.0 5 11705.0 6 7040.0 7 7340.0 8 7640.0 9 8047.0 10 8454.0 11 8449.0 12 8444.0 13 8275.5 14 8107.0 15 7809.0 16 7511.0 17 7063.0 18 6615.0 19 6456.5 20 6298.0 21 7435.0 22 8572.0 23 9517.0 24 10462.0 25 11851.5 26 17938.0 27 22635.0 28 26421.0 29 30207.0 30 35645.5 31 41084.0 32 47647.5 33 54211.0 34 61785.5 35 69360.0 36 70950.5 37 72541.0 38 86013.0 39 99485.0 40 117984.5 41 136484.0 42 160784.0 43 185084.0 44 186370.0 45 187656.0 46 178544.5 47 169433.0 48 161643.0 49 153853.0 50 145052.5 51 136252.0 52 119831.0 53 103410.0 54 93249.5 55 83089.0 56 74969.0 57 66849.0 58 59631.0 59 52413.0 60 46630.5 61 40848.0 62 36311.5 63 31775.0 64 24203.0 65 16631.0 66 13177.0 67 9723.0 68 7451.5 69 5180.0 70 3734.0 71 2288.0 72 1846.5 73 1405.0 74 1122.5 75 548.0 76 256.0 77 214.5 78 173.0 79 107.5 80 42.0 81 54.0 82 66.0 83 38.5 84 11.0 85 10.0 86 9.0 87 5.5 88 2.0 89 1.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1886443.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.980379503180238 #Duplication Level Percentage of deduplicated Percentage of total 1 81.6601965617571 14.682813244846868 2 6.825554772326159 2.4545213025233465 3 2.047059464447986 1.1042071810905507 4 1.0298617329609723 0.7406921917776458 5 0.6165154706570977 0.5542591065998198 6 0.4491106357501344 0.4845107801821177 7 0.35374482127955 0.4452326293723684 8 0.29415226525324045 0.42311754887787206 9 0.2214139087486771 0.35829954959253607 >10 3.3100457715422906 14.952790377586808 >50 1.6302283888112126 21.59746863760012 >100 1.5550089478958737 40.734298952805986 >500 0.005922715474736689 0.6681882699941903 >1k 8.884073212105034E-4 0.2931743258098663 >5k 2.961357737368344E-4 0.506425901339927 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9511 0.5041763785070633 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3341 0.177105801765545 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.3009817948382217E-5 0.0 0.0 0.020726838817817447 0.0 2 5.3009817948382217E-5 0.0 0.0 0.0694428615123807 0.0 3 5.3009817948382217E-5 0.0 0.0 0.09907534974552637 0.0 4 5.3009817948382217E-5 0.0 0.0 0.14556496008625758 0.0 5 5.3009817948382217E-5 0.0 0.0 0.2758630926033811 0.0 6 5.3009817948382217E-5 0.0 0.0 0.38850895574369326 0.0 7 5.3009817948382217E-5 0.0 0.0 0.4749679688175047 0.0 8 5.3009817948382217E-5 0.0 0.0 0.6580638800112169 0.0 9 5.3009817948382217E-5 0.0 0.0 0.7192372099236499 0.0 10 5.3009817948382217E-5 0.0 0.0 0.8381382315818713 0.0 11 5.3009817948382217E-5 0.0 0.0 1.0327902830883309 0.0 12 5.3009817948382217E-5 0.0 0.0 1.192455854748858 0.0 13 5.3009817948382217E-5 0.0 0.0 1.2490173304997818 0.0 14 5.3009817948382217E-5 0.0 0.0 1.2710164049483605 0.0 15 5.3009817948382217E-5 0.0 0.0 1.3089714345994021 0.0 16 5.3009817948382217E-5 0.0 0.0 1.3849875135373824 0.0 17 5.3009817948382217E-5 0.0 0.0 1.493392591241824 0.0 18 5.3009817948382217E-5 0.0 0.0 1.6283025779204567 0.0 19 5.3009817948382217E-5 0.0 0.0 1.7160868364429775 0.0 20 5.3009817948382217E-5 0.0 0.0 1.8070516840424016 0.0 21 5.3009817948382217E-5 0.0 0.0 1.926270764608313 0.0 22 5.3009817948382217E-5 0.0 0.0 2.0556147204023656 0.0 23 5.3009817948382217E-5 0.0 0.0 2.1872380983681987 0.0 24 5.3009817948382217E-5 0.0 0.0 2.2879037426521767 0.0 25 5.3009817948382217E-5 0.0 0.0 2.3733025593670205 0.0 26 5.3009817948382217E-5 0.0 0.0 2.4573761306331545 5.3009817948382217E-5 27 5.3009817948382217E-5 0.0 0.0 2.5464326247864366 5.3009817948382217E-5 28 5.3009817948382217E-5 0.0 0.0 2.6391998061961055 5.3009817948382217E-5 29 5.3009817948382217E-5 0.0 0.0 2.7476578937184954 5.3009817948382217E-5 30 5.3009817948382217E-5 0.0 0.0 2.884211184753528 5.3009817948382217E-5 31 5.3009817948382217E-5 0.0 0.0 3.008572217660433 5.3009817948382217E-5 32 5.3009817948382217E-5 0.0 0.0 3.1189386586289647 5.3009817948382217E-5 33 5.3009817948382217E-5 0.0 0.0 3.2314785021333803 5.3009817948382217E-5 34 5.3009817948382217E-5 0.0 0.0 3.3539841914120916 5.3009817948382217E-5 35 5.3009817948382217E-5 0.0 0.0 3.5069705260111226 5.3009817948382217E-5 36 5.3009817948382217E-5 0.0 0.0 3.629794274197524 5.3009817948382217E-5 37 5.3009817948382217E-5 0.0 0.0 3.7529890911095642 5.3009817948382217E-5 38 5.3009817948382217E-5 0.0 0.0 3.896751717385577 5.3009817948382217E-5 39 5.3009817948382217E-5 0.0 0.0 4.101316604848384 5.3009817948382217E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGTA 30 2.1662454E-6 45.000004 44 CGCATCG 60 0.0 45.000004 21 CCGTATC 30 2.1662454E-6 45.000004 31 CCGCGAA 20 7.034438E-4 45.000004 19 CGCACCT 20 7.034438E-4 45.000004 36 CACGTCG 20 7.034438E-4 45.000004 31 ATACGAT 20 7.034438E-4 45.000004 35 AGTCGGT 20 7.034438E-4 45.000004 28 CCGGGTA 25 3.8917613E-5 45.0 5 GTCGAAC 45 3.8562575E-10 45.0 21 CACGACG 380 0.0 44.407894 26 CGACGGT 400 0.0 43.3125 28 CGGTCTA 395 0.0 43.291138 31 TACGTAG 125 0.0 43.2 1 TTCGTAG 115 0.0 43.04348 1 TATAGCG 110 0.0 42.954544 1 GTAAGCG 100 0.0 42.75 1 TACGGGA 655 0.0 42.595417 4 CGTTTTT 6065 0.0 42.551525 1 ACGGTCT 410 0.0 42.256096 30 >>END_MODULE