##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547708_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2225608 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.67744140028253 31.0 31.0 33.0 30.0 34.0 2 32.05542126016801 33.0 31.0 34.0 30.0 34.0 3 32.08469326134701 33.0 31.0 34.0 30.0 34.0 4 35.786106538078585 37.0 35.0 37.0 35.0 37.0 5 35.69679296623664 37.0 35.0 37.0 33.0 37.0 6 35.75394768530667 37.0 35.0 37.0 33.0 37.0 7 36.12388659638175 37.0 35.0 37.0 35.0 37.0 8 36.02966110833534 37.0 35.0 37.0 35.0 37.0 9 37.85001222137951 39.0 38.0 39.0 35.0 39.0 10 37.46905699476278 39.0 37.0 39.0 35.0 39.0 11 37.093208687244115 39.0 37.0 39.0 33.0 39.0 12 36.125941765126655 37.0 35.0 39.0 33.0 39.0 13 35.74081599275344 37.0 35.0 39.0 31.0 39.0 14 36.615704562528535 38.0 35.0 41.0 31.0 41.0 15 36.91464040388065 38.0 35.0 41.0 32.0 41.0 16 37.11665261807111 38.0 35.0 41.0 33.0 41.0 17 37.01129893494272 38.0 35.0 41.0 32.0 41.0 18 36.94945471080262 38.0 35.0 41.0 32.0 41.0 19 36.92283501856571 38.0 35.0 41.0 32.0 41.0 20 36.73168590335764 38.0 35.0 41.0 32.0 41.0 21 36.60846968558704 38.0 35.0 41.0 32.0 41.0 22 36.5521012685073 38.0 35.0 41.0 32.0 41.0 23 36.48565156128123 37.0 35.0 40.0 32.0 41.0 24 36.47939843853904 37.0 35.0 40.0 32.0 41.0 25 36.45225214862635 37.0 35.0 40.0 32.0 41.0 26 36.40438253277307 37.0 35.0 40.0 32.0 41.0 27 36.28518589077681 37.0 35.0 40.0 31.0 41.0 28 36.315183087048574 37.0 35.0 40.0 31.0 41.0 29 36.28604767775817 37.0 35.0 40.0 31.0 41.0 30 36.32168333327343 37.0 35.0 40.0 31.0 41.0 31 36.151771111534465 37.0 35.0 40.0 31.0 41.0 32 35.9031536550911 37.0 35.0 40.0 30.0 41.0 33 35.79243155128846 37.0 35.0 40.0 30.0 41.0 34 35.56925972588164 37.0 35.0 40.0 30.0 41.0 35 35.46939038680666 37.0 35.0 40.0 29.0 41.0 36 35.369028598028045 37.0 35.0 40.0 29.0 41.0 37 35.11537521432346 36.0 34.0 40.0 27.0 41.0 38 35.24841751108012 37.0 34.0 40.0 29.0 41.0 39 35.213181296975925 36.0 34.0 40.0 28.0 41.0 40 35.060887182289065 36.0 34.0 40.0 27.0 41.0 41 35.0413608326354 36.0 34.0 40.0 27.0 41.0 42 35.07399775701741 36.0 34.0 40.0 28.0 41.0 43 34.9681615091247 36.0 34.0 40.0 27.0 41.0 44 34.87194016196922 36.0 34.0 40.0 27.0 41.0 45 34.87297134086506 36.0 34.0 40.0 27.0 41.0 46 34.71937196487432 35.0 34.0 40.0 27.0 41.0 47 34.58859916031934 35.0 34.0 40.0 26.0 41.0 48 34.521975118709136 35.0 34.0 40.0 26.0 41.0 49 34.6312279610785 36.0 34.0 40.0 27.0 41.0 50 34.47669760353126 35.0 34.0 40.0 26.0 41.0 51 33.87149309312332 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 3.0 13 5.0 14 22.0 15 49.0 16 100.0 17 311.0 18 854.0 19 1742.0 20 2963.0 21 5096.0 22 8503.0 23 12276.0 24 16838.0 25 23893.0 26 31827.0 27 37214.0 28 39105.0 29 42016.0 30 49303.0 31 60947.0 32 78119.0 33 106350.0 34 209055.0 35 389283.0 36 124542.0 37 160041.0 38 262503.0 39 562468.0 40 177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.059516320933426 24.079712150567396 30.951047983292657 14.909723545206525 2 29.812976948321534 27.007990625483014 30.736410005715292 12.442622420480157 3 27.090170416353644 26.060294535246097 33.50513657391598 13.344398474484276 4 25.633489814917993 26.65321116746525 33.33538520709847 14.377913810518294 5 24.873293050707943 31.001146652959548 30.25820360099353 13.86735669533898 6 21.879953702538813 40.14516482686978 27.101133712675367 10.873747757916039 7 87.76469171570196 3.36204758430056 7.563416378805251 1.3098443211922315 8 89.42738343859295 3.279328614922304 6.037451339139687 1.255836607345049 9 86.17173374646389 4.149383000061107 6.863158292026268 2.8157249614487365 10 52.52286116872333 29.62165844119899 11.212037339908914 6.643443050168763 11 45.46892354808214 17.488030237130708 23.871544315081543 13.171501899705609 12 41.624625720252624 18.49355322231049 25.14557819705896 14.73624286037793 13 24.508673584926008 36.52943375473129 25.204258791305566 13.757633869037136 14 14.42257576356663 41.772270768257485 28.81653013468679 14.988623333489096 15 13.14099338248245 25.823640101940683 47.63278169381131 13.40258482176556 16 18.57627219168874 21.067771143885178 44.82343701136948 15.532519653056603 17 18.02136764425721 21.64320940614879 28.875165797391094 31.460257152202903 18 21.581203877771827 24.990249855320435 34.641679936448824 18.786866330458913 19 26.57359247450584 26.477798426317662 27.537868303852253 19.410740795324244 20 30.363747793861272 25.848172724037653 26.837700080157873 16.9503794019432 21 22.998254858896985 26.801440325520037 31.486497172907356 18.71380764267562 22 22.41463905593438 22.271082778279013 30.603861955923957 24.710416209862654 23 19.11217069672647 27.38433722380581 29.39057551913904 24.112916560328685 24 19.52154197864134 24.2031840288137 38.639688570493995 17.635585422050966 25 16.60615885636644 26.85796420573614 35.59737384121552 20.938503096681895 26 16.33490713548837 34.757648247130675 28.335582905884593 20.571861711496364 27 16.466556554433666 34.84652283780432 32.14335138982246 16.543569217939545 28 13.52560738458884 30.392279323223136 39.44517632934461 16.636936962843414 29 15.349109097379232 25.228701550317933 40.24774353794559 19.174445814357245 30 18.16501378499718 30.32897078011941 34.77184661449815 16.73416882038526 31 28.086752024615297 25.914806201271745 28.123955341641476 17.874486432471485 32 29.029954960621996 26.992309517219564 28.326596597424164 15.651138924734276 33 27.702048159424304 28.04096678300941 26.200480947228804 18.05650411033749 34 19.68239690008303 28.756366799544214 29.105350088605004 22.45588621176775 35 18.786237288866683 28.214088015499584 30.860960240976848 22.138714454656885 36 28.62287518736453 24.55706485598542 30.082476339049823 16.737583617600222 37 19.976698502162105 31.850262939385555 31.356330494858035 16.81670806359431 38 19.80402658509495 32.3510699098853 25.260468150725558 22.584435354294197 39 19.78690766747783 30.706575461626667 29.923194021588706 19.583322849306796 40 24.005440311141943 26.477663631690756 26.966788401191945 22.550107655975356 41 18.11904881722208 24.374687725781 30.037095481324656 27.469167975672264 42 22.1808602413363 24.467381497550335 27.564872160775845 25.786886100337526 43 21.66203572237339 25.066139230268764 28.034811161714014 25.237013885643833 44 19.208369128795365 29.755958821140112 29.924766625569283 21.11090542449524 45 17.69745615580102 36.9520598416253 24.511773861344853 20.838710141228827 46 22.960063047940157 32.545398830342094 26.46557704681148 18.02896107490627 47 20.614636539768007 29.11141584681579 27.863936506338945 22.410011107077256 48 22.849486522334573 25.56483441828031 31.667077041419695 19.91860201796543 49 21.956831571417787 23.60972821808692 32.41963544343838 22.013804767056914 50 20.23231404631903 31.46829989827499 28.449709023332055 19.84967703207393 51 18.520287489980266 33.7920694030575 25.92882484247001 21.75881826449222 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1926.0 1 2796.0 2 3666.0 3 13970.0 4 24274.0 5 16448.5 6 8623.0 7 9101.0 8 9579.0 9 10558.5 10 11538.0 11 11584.0 12 11630.0 13 11441.5 14 11253.0 15 10575.5 16 9898.0 17 9299.0 18 8700.0 19 8445.0 20 8190.0 21 8543.5 22 8897.0 23 10596.0 24 12295.0 25 13740.5 26 19171.0 27 23156.0 28 27023.5 29 30891.0 30 36962.0 31 43033.0 32 48029.5 33 53026.0 34 59677.0 35 66328.0 36 71020.5 37 75713.0 38 84242.5 39 92772.0 40 123406.0 41 154040.0 42 191950.5 43 229861.0 44 233828.0 45 237795.0 46 239226.5 47 240658.0 48 210682.5 49 180707.0 50 167385.5 51 154064.0 52 138129.0 53 122194.0 54 110716.0 55 99238.0 56 90657.0 57 82076.0 58 74337.0 59 66598.0 60 58614.0 61 50630.0 62 41012.5 63 31395.0 64 26174.0 65 20953.0 66 16190.0 67 11427.0 68 8578.5 69 5730.0 70 4572.5 71 3415.0 72 2820.5 73 2226.0 74 1658.5 75 830.0 76 569.0 77 379.5 78 190.0 79 122.5 80 55.0 81 50.0 82 45.0 83 42.0 84 39.0 85 29.0 86 19.0 87 14.0 88 9.0 89 6.5 90 4.0 91 4.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2225608.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.267095099859038 #Duplication Level Percentage of deduplicated Percentage of total 1 82.03966183921415 14.16586642937987 2 7.765135059670538 2.681626510771615 3 2.3377032201256793 1.2109603145147043 4 1.0844772283655033 0.7490308574327477 5 0.6491571753067964 0.5604529340389158 6 0.44326244267547815 0.4592312851123977 7 0.3082260307410421 0.37255177295403535 8 0.24775352528072364 0.3422386945878068 9 0.19592333456279168 0.3044724165159501 >10 2.1645274756913797 8.995790863501911 >50 0.9792625276532457 12.366519923282508 >100 1.7700293628836548 54.78907081764639 >500 0.01279224760749233 1.3835963171182108 >1k 0.0015663976662235507 0.6452094642724058 >5k 2.6106627770392513E-4 0.2593369697449277 >10k+ 2.6106627770392513E-4 0.7140444291256136 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15840 0.7117156300660313 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5753 0.25849116286426005 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCG 4842 0.2175585278270028 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTC 3255 0.14625217019349318 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGC 2396 0.10765597535594768 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019769878612945317 0.0 2 0.0 0.0 0.0 0.08707732898156369 0.0 3 0.0 0.0 0.0 0.13066092501464768 0.0 4 0.0 0.0 0.0 0.2463147149003778 0.0 5 0.0 0.0 0.0 0.5853232015700878 0.0 6 0.0 0.0 0.0 0.7518844288841521 0.0 7 0.0 0.0 0.0 0.9109870201760597 0.0 8 0.0 0.0 0.0 1.1790935330929795 0.0 9 0.0 0.0 0.0 1.2581281160024587 0.0 10 0.0 0.0 0.0 1.6299815600950391 0.0 11 0.0 0.0 0.0 1.8945384811700892 0.0 12 0.0 0.0 0.0 2.2123842114154875 0.0 13 0.0 0.0 0.0 2.2953278385052536 0.0 14 0.0 0.0 0.0 2.326734986574455 0.0 15 0.0 0.0 0.0 2.3899985981358802 0.0 16 0.0 0.0 0.0 2.4938803239384475 0.0 17 0.0 0.0 0.0 2.615195488154248 0.0 18 0.0 0.0 0.0 2.781666852383708 0.0 19 0.0 0.0 0.0 2.9016790018727465 0.0 20 0.0 0.0 0.0 3.0152210092702756 0.0 21 0.0 0.0 0.0 3.1539696118993104 0.0 22 0.0 0.0 0.0 3.3092080905532333 0.0 23 0.0 0.0 0.0 3.4587851948770854 0.0 24 0.0 0.0 0.0 3.568013774213608 0.0 25 0.0 0.0 0.0 3.6626396023019328 0.0 26 0.0 0.0 0.0 3.756501594171121 0.0 27 0.0 0.0 0.0 3.8626298970887953 0.0 28 0.0 0.0 0.0 3.9588283291576953 0.0 29 0.0 0.0 0.0 4.076054723024001 0.0 30 0.0 0.0 0.0 4.22221703013289 0.0 31 0.0 0.0 0.0 4.359662618035162 0.0 32 0.0 0.0 0.0 4.474193119363338 0.0 33 0.0 0.0 0.0 4.58674663283022 0.0 34 4.4931542302148446E-5 0.0 0.0 4.71224043048012 0.0 35 8.986308460429689E-5 0.0 0.0 4.88037426177476 0.0 36 8.986308460429689E-5 0.0 0.0 5.018943138234586 0.0 37 8.986308460429689E-5 0.0 0.0 5.157152562355995 0.0 38 1.3479462690644533E-4 0.0 0.0 5.304438158022437 0.0 39 1.3479462690644533E-4 0.0 0.0 5.530668473513755 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGTA 20 7.0347113E-4 45.000004 20 TCCGAAC 20 7.0347113E-4 45.000004 15 CGCGCCA 40 6.8193913E-9 45.000004 37 CATTCGG 20 7.0347113E-4 45.000004 28 ATCCGAT 20 7.0347113E-4 45.000004 18 TACGCTA 20 7.0347113E-4 45.000004 10 TCGGACG 20 7.0347113E-4 45.000004 1 CCGTAAG 20 7.0347113E-4 45.000004 1 TACGATA 20 7.0347113E-4 45.000004 16 GAACCGT 20 7.0347113E-4 45.000004 16 CGCACCG 40 6.8193913E-9 45.000004 38 GCTACGC 20 7.0347113E-4 45.000004 20 CGTTTCG 40 6.8193913E-9 45.000004 41 CTCTACG 20 7.0347113E-4 45.000004 27 AGTCCGC 25 3.8919876E-5 45.0 10 GCGAAGT 35 1.2126111E-7 45.0 21 TAGGTCG 55 1.8189894E-12 45.0 1 CACGCGT 25 3.8919876E-5 45.0 27 CCGGACG 25 3.8919876E-5 45.0 37 ATGTCGC 25 3.8919876E-5 45.0 10 >>END_MODULE