SRR1547707_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547707_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1169910
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5886	0.5031156242787908	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4768	0.40755271773042373	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACGA	30	2.165536E-6	45.000004	8
CTCACCG	20	7.0333376E-4	45.000004	1
CGAACTG	25	3.8908478E-5	45.000004	17
GGTCGAC	20	7.0333376E-4	45.000004	8
ACGTTAG	50	2.1827873E-11	45.000004	1
GGCACGT	20	7.0333376E-4	45.000004	8
CTATACG	30	2.165536E-6	45.000004	1
TAGCGGC	20	7.0333376E-4	45.000004	21
TCCTCGA	20	7.0333376E-4	45.000004	20
CGCGATA	20	7.0333376E-4	45.000004	23
CTAAGCG	50	2.1827873E-11	45.000004	1
TAGCCCG	20	7.0333376E-4	45.000004	1
CGTAGCG	20	7.0333376E-4	45.000004	2
GCGGATA	20	7.0333376E-4	45.000004	21
ACGTAAC	25	3.8908478E-5	45.000004	32
ATACGGT	25	3.8908478E-5	45.000004	3
TTCGCGC	20	7.0333376E-4	45.000004	15
CGTCCCA	25	3.8908478E-5	45.000004	28
CAATCGT	20	7.0333376E-4	45.000004	11
TCGGTGA	20	7.0333376E-4	45.000004	24