##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547707_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1169910 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.635066800010257 31.0 31.0 33.0 30.0 34.0 2 32.0035891649785 33.0 31.0 34.0 30.0 34.0 3 32.03532322999205 33.0 31.0 34.0 30.0 34.0 4 35.740042396423654 37.0 35.0 37.0 35.0 37.0 5 35.67262182561052 37.0 35.0 37.0 33.0 37.0 6 35.743802514723356 37.0 35.0 37.0 33.0 37.0 7 36.12983391884846 37.0 35.0 37.0 35.0 37.0 8 36.04326828559462 37.0 35.0 37.0 35.0 37.0 9 37.887693070407124 39.0 38.0 39.0 35.0 39.0 10 37.397826328521 39.0 37.0 39.0 35.0 39.0 11 37.05899770067783 39.0 37.0 39.0 33.0 39.0 12 35.94584711644485 37.0 35.0 39.0 33.0 39.0 13 35.49888965817883 37.0 35.0 39.0 31.0 39.0 14 36.300192322486346 38.0 35.0 41.0 31.0 41.0 15 36.648699472609 38.0 35.0 41.0 32.0 41.0 16 36.85990033421374 38.0 35.0 41.0 33.0 41.0 17 36.817110717918474 38.0 35.0 41.0 33.0 41.0 18 36.7611089741946 37.0 35.0 40.0 32.0 41.0 19 36.69693737125078 37.0 35.0 40.0 32.0 41.0 20 36.5418647588276 36.0 35.0 40.0 32.0 41.0 21 36.35836004478977 36.0 35.0 40.0 32.0 41.0 22 36.29924951491995 36.0 35.0 40.0 32.0 41.0 23 36.27418861279928 36.0 35.0 40.0 32.0 41.0 24 36.25685907462967 36.0 35.0 40.0 32.0 41.0 25 36.175178432528995 36.0 35.0 40.0 32.0 41.0 26 36.15084835585643 36.0 35.0 40.0 32.0 41.0 27 36.04175791300185 36.0 35.0 40.0 31.0 41.0 28 36.09934952261285 36.0 35.0 40.0 31.0 41.0 29 36.09180962638152 36.0 35.0 40.0 31.0 41.0 30 36.09877170038721 36.0 35.0 40.0 31.0 41.0 31 35.901459086596404 36.0 35.0 40.0 31.0 41.0 32 35.64736005333744 36.0 35.0 40.0 30.0 41.0 33 35.54201690728347 36.0 35.0 40.0 30.0 41.0 34 35.37809489618859 36.0 35.0 40.0 30.0 41.0 35 35.2741920318657 35.0 34.0 40.0 30.0 41.0 36 35.13942269063432 35.0 34.0 40.0 29.0 41.0 37 34.86790265917891 35.0 34.0 40.0 27.0 41.0 38 35.01705857715551 35.0 34.0 40.0 29.0 41.0 39 35.006653503260935 36.0 34.0 40.0 28.0 41.0 40 34.844809429785194 36.0 34.0 40.0 27.0 41.0 41 34.861009821268304 36.0 34.0 40.0 28.0 41.0 42 34.85929686898992 36.0 34.0 40.0 28.0 41.0 43 34.75192279748015 35.0 34.0 40.0 27.0 41.0 44 34.623906112435996 35.0 34.0 40.0 27.0 41.0 45 34.603150669709635 35.0 34.0 40.0 27.0 41.0 46 34.424740364643434 35.0 34.0 40.0 26.0 41.0 47 34.324434358198495 35.0 34.0 40.0 26.0 41.0 48 34.229549281568666 35.0 34.0 40.0 26.0 41.0 49 34.33575745142789 35.0 34.0 40.0 26.0 41.0 50 34.18961287620415 35.0 34.0 39.0 26.0 41.0 51 33.532525578890684 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 5.0 14 5.0 15 28.0 16 79.0 17 168.0 18 425.0 19 812.0 20 1522.0 21 2593.0 22 4025.0 23 5883.0 24 8801.0 25 12949.0 26 17704.0 27 20253.0 28 21166.0 29 23133.0 30 26803.0 31 33797.0 32 42841.0 33 58398.0 34 117843.0 35 237499.0 36 62902.0 37 79978.0 38 129353.0 39 260855.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.136848133617118 24.5326563581814 31.167183800463285 14.163311707738202 2 30.01777914540435 24.692241283517536 32.825345539400466 12.464634031677651 3 28.668273627885902 24.766264071595252 33.16126881554992 13.404193484968928 4 25.21014437007975 27.683240591156583 32.96586916942329 14.140745869340376 5 22.865092186578455 31.794069629287726 31.586788727338 13.754049456795823 6 21.40147532716192 41.409082749955125 27.352531391303604 9.836910531579353 7 88.55758135241173 3.776273388551256 6.45639408159602 1.2097511774409997 8 90.58089938542281 2.6464428887692217 5.624449743997402 1.1482079818105666 9 87.79854860630306 3.7035327503825077 6.76120385328786 1.7367147900265834 10 54.400765870878956 19.22968433469241 17.02977152088622 9.339778273542409 11 49.86298091306169 18.08241659614842 18.535100990674497 13.519501500115394 12 46.457419801523194 20.430716892752436 21.277363215973878 11.834500089750494 13 23.990306946688207 42.16760263610021 20.859980682274703 12.982109734936875 14 14.331187869152329 46.52631398996504 25.18792043832432 13.954577702558316 15 13.163320255404262 25.34400082057594 49.28652631398997 12.206152610029832 16 15.529998034036808 19.383798753750288 49.569710490550555 15.51649272166235 17 16.5552905779077 18.79606123547965 27.01130856219709 37.63733962441555 18 21.30249335418964 24.359651597131403 34.966877794018345 19.370977254660616 19 28.449624330076674 25.92096827961125 25.91079655700011 19.718610833311963 20 31.740732193074685 23.738663657888214 25.003803711396603 19.5168004376405 21 22.11050422682087 27.918814267764187 30.216597857954884 19.75408364746006 22 21.99451239838962 22.182048191741245 28.001470198562284 27.82196921130685 23 16.92617380824166 30.416527767093193 26.073629595438963 26.58366882922618 24 18.22815430246771 24.697797266456394 39.72809874263832 17.345949688437575 25 15.49768785633083 24.95952680120693 38.13370259250712 21.409082749955125 26 16.1469685702319 36.164662238975644 26.44075185270662 21.247617338085835 27 16.245694113222385 37.7770084878324 29.951107350138045 16.026190048807173 28 12.49173013308716 30.421570890068466 41.01623201784753 16.070466958996846 29 14.065013548050706 24.64975938320042 40.596456137651614 20.688770931097263 30 16.671367882999547 32.33009376789668 34.47179697583575 16.526741373268028 31 30.432169995982594 26.80744672667128 25.618295424434358 17.142087852911764 32 30.592438734603515 27.528442358813926 26.844970980673725 15.034147925908831 33 28.324571975622053 28.83161952628835 24.696002256583842 18.147806241505755 34 19.27806412459078 29.412177005068767 26.778128232086228 24.531630638254224 35 17.871374721132394 27.939841526271252 31.126155003376326 23.062628749220025 36 31.945790701848857 23.274696344163225 28.774093733706014 16.0054192202819 37 19.044029027873936 32.214614799429015 31.34070142147686 17.40065475122018 38 18.65357164226308 33.85405714969528 24.29468933507706 23.197681872964587 39 18.815378960774762 32.58173705669667 28.88529886914378 19.71758511338479 40 23.57865134924909 27.030882717473993 25.661717568018055 23.728748365258866 41 17.65195613337778 23.942781923395817 28.835722405997043 29.56953953722936 42 22.31581916557684 23.539332085374088 25.93216572214957 28.212683026899505 43 23.03724218102247 25.330580984862085 25.700951355232455 25.93122547888299 44 18.89170961868862 30.730739971450795 29.45713772854322 20.920412681317366 45 16.966091408740844 40.62756964210922 22.184099631595593 20.22223931755434 46 23.312904411450454 34.015522561564566 25.5499995726167 17.121573454368285 47 22.14332726449043 29.67441939978289 25.020129753570785 23.162123582155893 48 23.447701105213223 26.66726500329085 29.968202682257612 19.916831209238318 49 21.838688446119786 23.027583318374916 32.37180637826842 22.76192185723688 50 20.316092690890752 33.00672701318905 27.555623936884032 19.121556359036166 51 17.745125693429408 35.94695318443299 24.10877759827679 22.19914352386081 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1174.0 1 1467.0 2 1760.0 3 5413.0 4 9066.0 5 6539.5 6 4013.0 7 4521.0 8 5029.0 9 5653.0 10 6277.0 11 6507.0 12 6737.0 13 6634.5 14 6532.0 15 6036.5 16 5541.0 17 5103.0 18 4665.0 19 4445.0 20 4225.0 21 4307.0 22 4389.0 23 4538.0 24 4687.0 25 5341.0 26 5987.5 27 5980.0 28 8275.0 29 10570.0 30 12342.5 31 14115.0 32 16381.5 33 18648.0 34 21952.5 35 25257.0 36 28379.0 37 31501.0 38 38595.5 39 45690.0 40 65692.5 41 85695.0 42 113936.0 43 142177.0 44 143610.5 45 145044.0 46 136502.0 47 127960.0 48 118861.0 49 109762.0 50 98227.0 51 86692.0 52 79852.5 53 73013.0 54 60894.5 55 48776.0 56 44553.0 57 40330.0 58 36945.5 59 33561.0 60 27944.5 61 22328.0 62 18506.0 63 14684.0 64 11480.0 65 8276.0 66 6483.5 67 4691.0 68 3483.5 69 2276.0 70 1727.0 71 1178.0 72 1022.0 73 866.0 74 553.5 75 274.0 76 307.0 77 204.0 78 101.0 79 69.0 80 37.0 81 44.0 82 51.0 83 28.5 84 6.0 85 4.0 86 2.0 87 2.5 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1169910.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.06247230395724 #Duplication Level Percentage of deduplicated Percentage of total 1 81.40491327654799 15.517789047402369 2 7.047525217825277 2.686865085524691 3 2.1677665260933057 1.2396896809529772 4 1.136921382544972 0.866901294661612 5 0.6940893798697779 0.6615529790119249 6 0.48035993543231276 0.549410877906549 7 0.34350822995255176 0.4583681283756325 8 0.2977014290640243 0.4539940197105164 9 0.2546279836588382 0.43684549976781717 >10 3.263898957929351 15.049160335350509 >50 1.5007782533074296 20.99810402729645 >100 1.4020487737360487 39.44249375536069 >500 0.004508195413942279 0.6294051530047011 >1k 9.01639082788456E-4 0.5035928722839361 >5k 4.50819541394228E-4 0.5058272433896328 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5886 0.5031156242787908 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4768 0.40755271773042373 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.547666059782376E-5 0.0 0.0 0.03410518757853168 0.0 2 8.547666059782376E-5 0.0 0.0 0.11753040832200767 0.0 3 8.547666059782376E-5 0.0 0.0 0.17001307792907147 0.0 4 8.547666059782376E-5 0.0 0.0 0.2520706721029823 0.0 5 8.547666059782376E-5 0.0 0.0 0.44302553187852056 0.0 6 8.547666059782376E-5 0.0 0.0 0.6147481430195485 0.0 7 8.547666059782376E-5 0.0 0.0 0.7310818780931867 0.0 8 8.547666059782376E-5 0.0 0.0 0.9894778230804079 0.0 9 8.547666059782376E-5 0.0 0.0 1.068543734133395 0.0 10 8.547666059782376E-5 0.0 0.0 1.2422323084681728 0.0 11 8.547666059782376E-5 0.0 0.0 1.5296048413980563 0.0 12 8.547666059782376E-5 0.0 0.0 1.733466676923866 0.0 13 8.547666059782376E-5 0.0 0.0 1.8057799317896248 0.0 14 8.547666059782376E-5 1.7095332119564753E-4 0.0 1.8351839030352761 0.0 15 8.547666059782376E-5 1.7095332119564753E-4 0.0 1.88963253583609 0.0 16 8.547666059782376E-5 1.7095332119564753E-4 0.0 2.034259045567608 0.0 17 8.547666059782376E-5 1.7095332119564753E-4 0.0 2.195553504115701 0.0 18 8.547666059782376E-5 1.7095332119564753E-4 0.0 2.3923207768118915 0.0 19 8.547666059782376E-5 1.7095332119564753E-4 0.0 2.5020728090194972 0.0 20 8.547666059782376E-5 1.7095332119564753E-4 0.0 2.613705327760255 0.0 21 8.547666059782376E-5 1.7095332119564753E-4 0.0 2.770725953278457 0.0 22 8.547666059782376E-5 1.7095332119564753E-4 0.0 2.933900898359703 0.0 23 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.118701438572198 0.0 24 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.2448649896145856 0.0 25 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.357865134924909 0.0 26 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.4735150567137643 0.0 27 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.586173295381696 0.0 28 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.703105367079519 0.0 29 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.833115367848809 0.0 30 8.547666059782376E-5 1.7095332119564753E-4 0.0 3.9951791163422827 0.0 31 8.547666059782376E-5 1.7095332119564753E-4 0.0 4.1495499653819525 0.0 32 8.547666059782376E-5 1.7095332119564753E-4 0.0 4.266396560419177 0.0 33 8.547666059782376E-5 1.7095332119564753E-4 0.0 4.386918651862109 0.0 34 8.547666059782376E-5 1.7095332119564753E-4 0.0 4.523082972194442 0.0 35 8.547666059782376E-5 1.7095332119564753E-4 0.0 4.720277628193622 0.0 36 8.547666059782376E-5 1.7095332119564753E-4 0.0 4.869434400936824 0.0 37 8.547666059782376E-5 1.7095332119564753E-4 0.0 5.015941397201495 0.0 38 8.547666059782376E-5 1.7095332119564753E-4 0.0 5.172021779453121 0.0 39 8.547666059782376E-5 1.7095332119564753E-4 0.0 5.3495568035148 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 30 2.165536E-6 45.000004 8 CTCACCG 20 7.0333376E-4 45.000004 1 CGAACTG 25 3.8908478E-5 45.000004 17 GGTCGAC 20 7.0333376E-4 45.000004 8 ACGTTAG 50 2.1827873E-11 45.000004 1 GGCACGT 20 7.0333376E-4 45.000004 8 CTATACG 30 2.165536E-6 45.000004 1 TAGCGGC 20 7.0333376E-4 45.000004 21 TCCTCGA 20 7.0333376E-4 45.000004 20 CGCGATA 20 7.0333376E-4 45.000004 23 CTAAGCG 50 2.1827873E-11 45.000004 1 TAGCCCG 20 7.0333376E-4 45.000004 1 CGTAGCG 20 7.0333376E-4 45.000004 2 GCGGATA 20 7.0333376E-4 45.000004 21 ACGTAAC 25 3.8908478E-5 45.000004 32 ATACGGT 25 3.8908478E-5 45.000004 3 TTCGCGC 20 7.0333376E-4 45.000004 15 CGTCCCA 25 3.8908478E-5 45.000004 28 CAATCGT 20 7.0333376E-4 45.000004 11 TCGGTGA 20 7.0333376E-4 45.000004 24 >>END_MODULE