##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547705_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1766962 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.630030526972284 31.0 31.0 33.0 30.0 34.0 2 32.009270714367375 33.0 31.0 34.0 30.0 34.0 3 32.091535075457195 33.0 31.0 34.0 30.0 34.0 4 35.77992395988142 37.0 35.0 37.0 35.0 37.0 5 35.713483934572444 37.0 35.0 37.0 33.0 37.0 6 35.763432377153556 37.0 35.0 37.0 33.0 37.0 7 36.11816722713901 37.0 35.0 37.0 35.0 37.0 8 36.01635745420671 37.0 35.0 37.0 35.0 37.0 9 37.82413543698166 39.0 38.0 39.0 35.0 39.0 10 37.42637136508878 39.0 37.0 39.0 35.0 39.0 11 37.11589779519876 39.0 37.0 39.0 33.0 39.0 12 36.4827494875385 39.0 35.0 39.0 33.0 39.0 13 36.24245286542665 39.0 35.0 39.0 32.0 39.0 14 37.225892237637254 39.0 35.0 41.0 32.0 41.0 15 37.4410089181318 39.0 35.0 41.0 33.0 41.0 16 37.54794613579692 39.0 35.0 41.0 33.0 41.0 17 37.44367790591988 39.0 35.0 41.0 33.0 41.0 18 37.352414483163756 39.0 35.0 41.0 33.0 41.0 19 37.31746466534085 39.0 35.0 41.0 32.0 41.0 20 37.25079373523596 39.0 35.0 41.0 32.0 41.0 21 37.10539558858651 39.0 35.0 41.0 32.0 41.0 22 37.06437433289454 39.0 35.0 41.0 32.0 41.0 23 36.97971093888833 39.0 35.0 41.0 32.0 41.0 24 36.967039472269356 38.0 35.0 41.0 32.0 41.0 25 36.88444856199511 38.0 35.0 41.0 32.0 41.0 26 36.8383972037882 38.0 35.0 41.0 32.0 41.0 27 36.766260960903516 38.0 35.0 41.0 32.0 41.0 28 36.76892825086222 38.0 35.0 41.0 32.0 41.0 29 36.712189622640444 38.0 35.0 41.0 31.0 41.0 30 36.71052348607384 38.0 35.0 41.0 31.0 41.0 31 36.58639744374808 38.0 35.0 41.0 31.0 41.0 32 36.4047483760262 38.0 35.0 41.0 31.0 41.0 33 36.33384305944327 38.0 35.0 41.0 30.0 41.0 34 36.16368093937504 38.0 35.0 41.0 30.0 41.0 35 36.06124636523027 38.0 35.0 41.0 30.0 41.0 36 35.99688561497078 38.0 35.0 41.0 30.0 41.0 37 35.733043494993105 38.0 35.0 41.0 29.0 41.0 38 35.85393517234666 38.0 35.0 41.0 30.0 41.0 39 35.782182072959124 38.0 35.0 40.0 29.0 41.0 40 35.675380115701415 38.0 35.0 40.0 29.0 41.0 41 35.618159869878355 38.0 35.0 40.0 29.0 41.0 42 35.62759980124078 38.0 35.0 40.0 29.0 41.0 43 35.52828640344274 38.0 35.0 40.0 28.0 41.0 44 35.39681441932537 38.0 34.0 40.0 28.0 41.0 45 35.394686473166935 38.0 34.0 40.0 28.0 41.0 46 35.22817638409881 37.0 34.0 40.0 27.0 41.0 47 35.12425847301753 37.0 34.0 40.0 27.0 41.0 48 34.995121570243164 37.0 34.0 40.0 27.0 41.0 49 35.062773845730696 37.0 34.0 40.0 27.0 41.0 50 34.94827336411309 37.0 34.0 40.0 27.0 41.0 51 34.32219481799835 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 3.0 12 12.0 13 12.0 14 17.0 15 34.0 16 127.0 17 263.0 18 625.0 19 1203.0 20 2142.0 21 3415.0 22 5361.0 23 7812.0 24 11272.0 25 16369.0 26 22630.0 27 26255.0 28 28936.0 29 31778.0 30 37704.0 31 45176.0 32 57459.0 33 76038.0 34 141025.0 35 235949.0 36 109793.0 37 147237.0 38 246681.0 39 511513.0 40 119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.661440370534283 24.287392711331655 30.380845768047077 14.670321150086984 2 29.08076121614387 25.09640841172589 32.32446424993859 13.49836612219165 3 29.885871908960127 24.56770434225524 32.05315111473818 13.49327263404646 4 26.71806184852872 27.31637692265029 31.387828374351006 14.577732854469987 5 24.38705529603919 31.96407166651009 29.291688219667428 14.357184817783292 6 21.8493097191677 41.36500954746056 26.369384287834148 10.416296445537595 7 88.32917742430227 3.9590551466302046 6.178231337176465 1.5335360918910537 8 90.17075636035183 2.6771939634242274 5.758414725387417 1.3936349508365204 9 86.3951799755739 4.895691022217796 6.544056974626505 2.1650720275818043 10 45.9900099719179 32.4394072990817 12.217693419552882 9.352889309447516 11 37.705338315142036 21.682809251132735 24.8626173058617 15.749235127863532 12 35.98447504813346 21.80222325098106 26.089242439848736 16.12405926103674 13 25.238007382162152 30.87321628874871 26.877148461596796 17.01162786749234 14 17.49064213039103 35.6923352058505 28.931012664675304 17.88600999908317 15 16.631993217737563 27.851985498273308 40.02293201551589 15.49308926847323 16 21.55088790817233 24.864258540930706 38.0879724634712 15.496881087425763 17 21.08285294194216 24.271036954954322 28.083343048690352 26.562767054413168 18 22.81746862694274 26.68302996895236 31.798703084729606 18.700798319375288 19 25.598230182652486 28.078306154857884 27.372178914996475 18.951284747493155 20 28.770680976727288 27.30760480417802 26.42145105554053 17.50026316355417 21 25.588665743802075 26.420488952224215 30.009360699324606 17.981484604649108 22 23.535763644039882 22.219096958508448 30.903833811932575 23.341305585519102 23 20.302134397910084 26.31448780449155 30.42770585898282 22.955671938615545 24 21.434020652396597 25.930438798344273 34.506514571337696 18.129025977921426 25 20.344240566576985 26.921065648270876 32.28530098553336 20.44939279961878 26 18.458857632478797 32.80064879720107 27.65911208050881 21.081381489811328 27 18.465535761380266 33.172190460236266 30.825903443311176 17.536370335072288 28 16.0057771474429 29.404254307676116 35.80824035830991 18.781728186571076 29 17.89149964741743 27.40743717182373 34.56752324045452 20.133539940304317 30 19.45163506628892 28.87147544768931 32.932853111725095 18.744036374296673 31 26.529489598531264 26.605552354832756 28.11588477850684 18.74907326812914 32 26.551957540682817 27.152762764564265 28.432812929763063 17.862466764989854 33 24.960921627063854 28.066987292313023 27.360011137760743 19.61207994286238 34 20.428679281161678 28.371860854958964 29.471261973941715 21.728197889937643 35 19.760866391014634 27.987755254498964 30.495336062688388 21.756042291798014 36 26.241481141077173 26.201185990417454 28.960837867481022 18.59649500102436 37 21.059253113536116 30.157637798662336 29.87376072603712 18.90934836176443 38 20.394043561774392 31.285336074007255 25.92042160499207 22.40019875922629 39 20.226015047295867 30.156675695346024 28.65754894559136 20.95976031176675 40 23.09845938961902 27.177098319035725 27.425038003080992 22.299404288264263 41 19.48083773165467 25.907348318752753 29.091683918499662 25.520130031092915 42 21.57714766927642 26.702441818216805 27.629003906139467 24.091406606367315 43 22.22543552153357 26.779579866460058 27.630588546895744 23.364396065110622 44 20.3366003343592 29.725710003950283 28.801751254412945 21.135938407277578 45 19.35327415077404 34.03604604966038 26.215900511725778 20.394779287839807 46 23.13326489194448 30.29533176152062 27.035103188410393 19.536300158124508 47 21.555132481626657 29.413139614773833 27.2987194970803 21.73300840651921 48 22.271559886403896 27.585369691029012 29.38942659774234 20.753643824824756 49 21.527854022893532 25.46183788898686 30.77876038081181 22.231547707307797 50 20.32330067086898 29.762439712908375 29.30266751633595 20.611592099886696 51 19.31773292238316 31.711321465883252 27.45571212057758 21.515233491156007 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1182.0 1 2116.0 2 3050.0 3 9308.0 4 15566.0 5 11076.0 6 6586.0 7 6896.0 8 7206.0 9 7511.5 10 7817.0 11 7953.0 12 8089.0 13 7692.0 14 7295.0 15 6883.0 16 6471.0 17 6397.5 18 6324.0 19 5978.0 20 5632.0 21 6301.5 22 6971.0 23 8751.5 24 10532.0 25 11452.5 26 15782.0 27 19191.0 28 23844.0 29 28497.0 30 31828.0 31 35159.0 32 41692.0 33 48225.0 34 52079.5 35 55934.0 36 61638.5 37 67343.0 38 75691.0 39 84039.0 40 99854.0 41 115669.0 42 134239.5 43 152810.0 44 155093.5 45 157377.0 46 160137.5 47 162898.0 48 155019.0 49 147140.0 50 134166.5 51 121193.0 52 111969.5 53 102746.0 54 94343.0 55 85940.0 56 79867.0 57 73794.0 58 68331.0 59 62868.0 60 56807.0 61 50746.0 62 42609.5 63 34473.0 64 28627.5 65 22782.0 66 18362.5 67 13943.0 68 11012.5 69 8082.0 70 6561.5 71 5041.0 72 3874.0 73 2707.0 74 2206.5 75 1239.5 76 773.0 77 623.0 78 473.0 79 312.0 80 151.0 81 114.5 82 78.0 83 52.0 84 26.0 85 25.5 86 25.0 87 19.5 88 14.0 89 13.5 90 13.0 91 10.5 92 8.0 93 4.5 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1766962.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.075541532769133 #Duplication Level Percentage of deduplicated Percentage of total 1 81.89701368352115 14.803328722462483 2 5.9925508408778265 2.166372032230355 3 1.8058799099609124 0.9792677194707557 4 0.9208536401810354 0.6657971287477579 5 0.5982500707372466 0.5406847000296586 6 0.42035552243102875 0.45588922225385553 7 0.3698745192030721 0.46799775636377006 8 0.2889940657891938 0.4178979391117109 9 0.2395177782561348 0.3896472193834816 >10 3.998482142147656 18.55235128959804 >50 2.2116282800352387 29.320480925690447 >100 1.2512536528914817 30.01712097387752 >500 0.003773572212789209 0.41533816893399234 >1k 0.0012578574042630699 0.30228115264690997 >5k 3.1446435106576747E-4 0.505545049199251 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8894 0.5033498173701528 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02309047959152489 0.0 2 0.0 0.0 0.0 0.06734723214194759 0.0 3 0.0 0.0 0.0 0.0880607505990508 0.0 4 0.0 0.0 0.0 0.11579196383397039 0.0 5 0.0 0.0 0.0 0.1926470405136047 0.0 6 0.0 0.0 0.0 0.26259761104087126 0.0 7 0.0 0.0 0.0 0.3229837427177268 0.0 8 0.0 0.0 0.0 0.45445233117633543 0.0 9 0.0 0.0 0.0 0.494690887523331 0.0 10 0.0 0.0 0.0 0.5768092352863277 0.0 11 0.0 0.0 0.0 0.714842764020958 0.0 12 0.0 0.0 0.0 0.8308045107931014 0.0 13 0.0 0.0 0.0 0.8726843022091024 0.0 14 0.0 0.0 0.0 0.8914736140335785 0.0 15 0.0 0.0 0.0 0.9233362120973739 0.0 16 0.0 0.0 0.0 0.9897779352357323 0.0 17 0.0 0.0 0.0 1.074160055507702 0.0 18 0.0 0.0 0.0 1.172690753960753 0.0 19 0.0 0.0 0.0 1.2347747150193382 0.0 20 0.0 0.0 0.0 1.301612598346767 0.0 21 0.0 0.0 0.0 1.3910882067639259 0.0 22 0.0 0.0 0.0 1.4884304246497662 0.0 23 0.0 0.0 0.0 1.5899606216772064 0.0 24 0.0 0.0 0.0 1.6728146955056193 0.0 25 0.0 0.0 0.0 1.7431614262219561 0.0 26 0.0 0.0 0.0 1.816111495323612 0.0 27 0.0 0.0 0.0 1.8941550525704571 0.0 28 0.0 0.0 0.0 1.9724249870681996 0.0 29 0.0 0.0 0.0 2.061334652358115 0.0 30 0.0 0.0 0.0 2.166769856963534 0.0 31 0.0 0.0 0.0 2.2723748445071257 0.0 32 0.0 0.0 0.0 2.3590207372880685 0.0 33 0.0 0.0 0.0 2.450024392148784 0.0 34 0.0 0.0 0.0 2.5527430697434355 0.0 35 0.0 0.0 0.0 2.674251059162563 0.0 36 0.0 0.0 0.0 2.775045530124587 0.0 37 0.0 0.0 0.0 2.8856874115006437 0.0 38 0.0 0.0 0.0 3.009855333617814 0.0 39 0.0 0.0 0.0 3.185184514437775 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCACC 20 7.034318E-4 45.0 21 CACGATT 20 7.034318E-4 45.0 27 TACGACG 25 3.8916594E-5 45.0 1 TTGCGGT 25 3.8916594E-5 45.0 11 CGTACTA 20 7.034318E-4 45.0 29 GTATCGT 20 7.034318E-4 45.0 25 CGTACAT 25 3.8916594E-5 45.0 45 ACGTAGC 25 3.8916594E-5 45.0 11 GCGCTAA 20 7.034318E-4 45.0 23 GTACGTA 30 2.1661672E-6 44.999996 15 CGTTTTT 5745 0.0 43.31593 1 TACGGGA 640 0.0 41.484375 4 TTGCGAG 210 0.0 40.714287 1 TATTACG 50 1.0822987E-9 40.5 1 ACGGGAC 435 0.0 40.34483 5 TCACGAC 580 0.0 40.344826 25 TAGTACG 90 0.0 40.0 1 CGACGGT 595 0.0 39.705883 28 CTACGCT 40 3.459627E-7 39.375 15 CGAGGGT 200 0.0 39.375 4 >>END_MODULE