##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547704_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2185925 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.711214245685465 31.0 31.0 33.0 30.0 34.0 2 32.08505506822055 33.0 31.0 34.0 30.0 34.0 3 32.142481100678204 33.0 31.0 34.0 30.0 34.0 4 35.82611434518568 37.0 35.0 37.0 35.0 37.0 5 35.76230977732539 37.0 35.0 37.0 35.0 37.0 6 35.83031348285051 37.0 35.0 37.0 35.0 37.0 7 36.16525361117147 37.0 35.0 37.0 35.0 37.0 8 36.056344568089024 37.0 35.0 37.0 35.0 37.0 9 37.8579104955568 39.0 38.0 39.0 35.0 39.0 10 37.5170104189302 39.0 37.0 39.0 35.0 39.0 11 37.18996534647803 39.0 37.0 39.0 34.0 39.0 12 36.45594244999256 38.0 35.0 39.0 33.0 39.0 13 36.16570971099191 38.0 35.0 39.0 32.0 39.0 14 37.16830678088223 39.0 35.0 41.0 33.0 41.0 15 37.386958381463224 39.0 35.0 41.0 33.0 41.0 16 37.51435387764905 39.0 35.0 41.0 33.0 41.0 17 37.44542562073264 39.0 35.0 41.0 33.0 41.0 18 37.34895662019511 39.0 35.0 41.0 33.0 41.0 19 37.309318938206935 39.0 35.0 41.0 33.0 41.0 20 37.20095291466999 39.0 35.0 41.0 33.0 41.0 21 37.05350915516315 38.0 35.0 41.0 32.0 41.0 22 36.9983155872228 38.0 35.0 41.0 32.0 41.0 23 36.93196564383499 38.0 35.0 41.0 32.0 41.0 24 36.91351075631598 38.0 35.0 41.0 32.0 41.0 25 36.846245868453856 38.0 35.0 41.0 32.0 41.0 26 36.82227752553267 38.0 35.0 41.0 32.0 41.0 27 36.72507107974885 38.0 35.0 41.0 32.0 41.0 28 36.73001772704919 38.0 35.0 41.0 32.0 41.0 29 36.67212507290964 38.0 35.0 40.0 32.0 41.0 30 36.67576106225054 38.0 35.0 41.0 32.0 41.0 31 36.53809851664627 38.0 35.0 41.0 31.0 41.0 32 36.326976451616595 38.0 35.0 41.0 31.0 41.0 33 36.24039251117948 38.0 35.0 41.0 31.0 41.0 34 36.073883596189255 38.0 35.0 41.0 30.0 41.0 35 35.982207532280384 38.0 35.0 41.0 30.0 41.0 36 35.88437160469824 38.0 35.0 41.0 30.0 41.0 37 35.6308317988952 38.0 35.0 40.0 29.0 41.0 38 35.74078204878941 38.0 35.0 40.0 30.0 41.0 39 35.70507268090168 38.0 35.0 40.0 30.0 41.0 40 35.586222308633644 38.0 35.0 40.0 29.0 41.0 41 35.54941729473793 38.0 35.0 40.0 29.0 41.0 42 35.5534654665645 38.0 35.0 40.0 29.0 41.0 43 35.46456763155186 37.0 35.0 40.0 29.0 41.0 44 35.337458512986494 37.0 34.0 40.0 29.0 41.0 45 35.32381669087457 37.0 34.0 40.0 29.0 41.0 46 35.14884865674714 37.0 34.0 40.0 28.0 41.0 47 35.04007136566899 37.0 34.0 40.0 27.0 41.0 48 34.927229891235974 36.0 34.0 40.0 27.0 41.0 49 35.00629253062205 36.0 34.0 40.0 27.0 41.0 50 34.85472420142503 36.0 34.0 40.0 27.0 41.0 51 34.2445902764276 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 6.0 13 16.0 14 32.0 15 55.0 16 134.0 17 310.0 18 675.0 19 1293.0 20 2388.0 21 3896.0 22 6207.0 23 9258.0 24 13509.0 25 20433.0 26 27300.0 27 32532.0 28 34927.0 29 38263.0 30 44419.0 31 54678.0 32 69962.0 33 94494.0 34 180666.0 35 335478.0 36 133711.0 37 176100.0 38 288581.0 39 616437.0 40 158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.114127886363896 23.282546290472 29.75408579891808 13.84924002424603 2 30.8930086805357 25.294509189473562 30.442032549149673 13.370449580841063 3 29.345288607797613 24.865857703260634 32.9294920914487 12.859361597493052 4 26.535814357766164 27.308210482976314 31.31209899699212 14.843876162265401 5 24.052563560048952 32.00768553358418 29.676727243615403 14.263023662751467 6 22.471402266774934 40.68753502521816 26.768347495911343 10.072715212095567 7 87.74619440282719 3.9865960634513997 6.485583906126697 1.7816256275947253 8 88.65725036311859 3.2606333703123394 6.290563491428114 1.7915527751409588 9 84.76727243615403 5.526356119263013 7.433603623180119 2.2727678214028386 10 48.571794549218296 31.373766254560426 12.076306369157223 7.978132827064058 11 39.94734494550362 20.288893717762505 24.440317028260345 15.32344430847353 12 38.11141736335876 20.351201436462823 27.138717019110903 14.398664181067511 13 24.35842949780985 34.12257968594531 26.144218122762673 15.374772693482164 14 16.444571520065875 39.32815627251621 28.759861385912146 15.46741082150577 15 14.645516200235598 27.601861912005216 43.38136029369718 14.371261594062009 16 18.419479167858 23.591934764458983 42.29568718048423 15.692898887198783 17 19.010396056589315 22.902432608621066 28.54516966501596 29.542001669773665 18 21.640495442432837 25.639077278497663 33.96315061129728 18.757276667772224 19 26.891133044363368 26.49729519539783 28.204764573349955 18.406807186888845 20 29.347667463430817 25.54049201139106 27.209304985303707 17.902535539874425 21 23.54705673799421 26.824845317199813 30.665919462012646 18.962178482793327 22 23.668012397497627 22.11141736335876 30.255109393048706 23.965460846094903 23 19.02860345162803 27.938790214668845 29.385729153561996 23.64687718014113 24 19.549069615837688 25.267518327481504 37.75939247686906 17.424019579811752 25 18.116769788533457 25.733499548246165 35.17156352573853 20.978167137481844 26 17.568123334515136 34.15890298157531 28.383956448643023 19.889017235266536 27 17.603760421789403 33.70678316959639 31.91056417763647 16.778892230977732 28 16.31922412708579 28.974598854032045 37.75120372382401 16.954973295058156 29 16.51456477235038 25.673570685179044 37.39025812870981 20.421606413760767 30 18.5257957157725 29.682308404908675 33.349726088498 18.44216979082082 31 27.588869700470052 26.93061289842973 26.871827715955487 18.608689685144732 32 26.3902924391276 28.211169184670105 28.757391035831514 16.641147340370782 33 25.830026190285576 27.886958610199343 27.468463007651224 18.814552191863857 34 20.601393002962133 29.017098024863614 28.10855816187655 22.2729508102977 35 19.672449878198016 27.303407024486205 31.2188204078365 21.805322689479283 36 28.07401900797145 25.080046204695954 29.060054667932338 17.785880119400254 37 20.888914304013177 31.13688713016229 30.173908070953942 17.800290494870595 38 20.028363278703523 32.05018470441575 25.898281048068895 22.02317096881183 39 19.556572160527008 30.333337145601973 29.909580612326593 20.200510081544426 40 22.496471745370954 27.565630110822646 27.615677573567254 22.322220570239143 41 18.439241968503037 25.642599814723745 29.85861820510768 26.059540011665543 42 21.847318640849984 25.854958427210452 27.464528746411705 24.833194185527866 43 22.469343641707745 25.594565229822614 28.326955407893685 23.609135720575956 44 19.51928817319899 29.72238297288333 29.766940768782096 20.991388085135583 45 18.53499090773929 35.59618925626451 25.218340061987487 20.650479774008716 46 22.972197124786987 31.07201756693391 27.22947951096218 18.726305797316925 47 21.431567871724784 29.36111714720313 27.168315472854744 22.038999508217344 48 22.638471127783433 27.129201596578106 30.544552077495794 19.687775198142663 49 21.99004997884191 25.15200658760022 31.34069101181422 21.517252421743656 50 20.665942335624507 30.804716538765053 28.935073252741972 19.594267872868464 51 19.38913732172879 32.19520340359344 26.588057687249105 21.827601587428664 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2102.0 1 3029.5 2 3957.0 3 11278.5 4 18600.0 5 13460.0 6 8320.0 7 8940.0 8 9560.0 9 9857.0 10 10154.0 11 10457.5 12 10761.0 13 10383.5 14 10006.0 15 9406.0 16 8806.0 17 8273.0 18 7740.0 19 7886.5 20 8033.0 21 9041.5 22 10050.0 23 12231.0 24 14412.0 25 15569.5 26 21228.0 27 25729.0 28 30509.0 29 35289.0 30 41883.5 31 48478.0 32 54738.0 33 60998.0 34 67981.0 35 74964.0 36 78409.0 37 81854.0 38 92630.0 39 103406.0 40 128655.0 41 153904.0 42 182349.5 43 210795.0 44 209126.5 45 207458.0 46 198862.0 47 190266.0 48 184981.0 49 179696.0 50 163193.0 51 146690.0 52 131618.0 53 116546.0 54 105598.5 55 94651.0 56 86398.5 57 78146.0 58 74565.5 59 70985.0 60 63620.0 61 56255.0 62 49369.5 63 42484.0 64 34170.5 65 25857.0 66 21367.5 67 16878.0 68 14161.5 69 11445.0 70 8959.5 71 6474.0 72 5036.0 73 3598.0 74 2818.5 75 1536.0 76 1033.0 77 640.0 78 247.0 79 251.0 80 255.0 81 214.0 82 173.0 83 108.5 84 44.0 85 31.0 86 18.0 87 13.5 88 9.0 89 9.0 90 9.0 91 10.0 92 11.0 93 10.0 94 9.0 95 6.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2185925.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.3939909011967 #Duplication Level Percentage of deduplicated Percentage of total 1 83.23782723055302 13.64600182253069 2 6.577348447109492 2.156579811918265 3 1.947165575417457 0.9576544417955166 4 0.8653343768850195 0.5674513560458289 5 0.5293073933700444 0.43387302954223245 6 0.35666009359821926 0.35082493975615014 7 0.2945066499260893 0.3379697537461161 8 0.21229364221497163 0.2784272031083322 9 0.18677561690383007 0.27557979876781113 >10 2.3522221978724023 9.592777939085435 >50 1.4108007406696625 17.148503870605726 >100 2.018830293433561 52.35969137169123 >500 0.008966352448242633 0.9094353626177061 >1k 0.0016811910840454935 0.5041445148363131 >5k 0.0 0.0 >10k+ 2.8019851400758227E-4 0.48108478395268395 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10473 0.4791106739709734 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3855 0.17635554742271578 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.574722371536077E-5 0.0 0.0 0.019900042316181938 0.0 2 4.574722371536077E-5 0.0 0.0 0.07287532737856971 0.0 3 4.574722371536077E-5 0.0 0.0 0.10352596726786144 0.0 4 4.574722371536077E-5 0.0 0.0 0.15064560769468302 0.0 5 4.574722371536077E-5 0.0 0.0 0.25453755275226736 0.0 6 4.574722371536077E-5 0.0 0.0 0.3472214279995883 0.0 7 4.574722371536077E-5 0.0 0.0 0.40998661893706323 0.0 8 4.574722371536077E-5 0.0 0.0 0.545764378924254 0.0 9 9.149444743072154E-5 0.0 0.0 0.5972757528277503 0.0 10 9.149444743072154E-5 0.0 0.0 0.6895479030616329 0.0 11 9.149444743072154E-5 0.0 0.0 0.8519048000274483 0.0 12 9.149444743072154E-5 0.0 0.0 0.9838855404462642 0.0 13 9.149444743072154E-5 0.0 0.0 1.0315998947813854 0.0 14 9.149444743072154E-5 0.0 0.0 1.0535585621647585 0.0 15 9.149444743072154E-5 0.0 0.0 1.085947596555234 0.0 16 9.149444743072154E-5 0.0 0.0 1.1566270571954664 0.0 17 9.149444743072154E-5 0.0 0.0 1.2428148266752062 0.0 18 9.149444743072154E-5 0.0 0.0 1.3500920662877272 0.0 19 9.149444743072154E-5 0.0 0.0 1.4197193407825062 0.0 20 9.149444743072154E-5 0.0 0.0 1.4874709791049556 0.0 21 9.149444743072154E-5 0.0 0.0 1.581481523840022 0.0 22 9.149444743072154E-5 0.0 0.0 1.6754920685750883 0.0 23 9.149444743072154E-5 0.0 0.0 1.7824490776216018 0.0 24 9.149444743072154E-5 0.0 0.0 1.860082116266569 0.0 25 9.149444743072154E-5 0.0 0.0 1.9266900739961343 0.0 26 9.149444743072154E-5 0.0 0.0 1.9982387318869586 0.0 27 9.149444743072154E-5 0.0 0.0 2.0697416425540673 0.0 28 9.149444743072154E-5 0.0 0.0 2.1451788144606976 0.0 29 9.149444743072154E-5 0.0 0.0 2.2329677367704748 0.0 30 9.149444743072154E-5 0.0 0.0 2.33507554010316 0.0 31 9.149444743072154E-5 0.0 0.0 2.4359481683955306 0.0 32 9.149444743072154E-5 0.0 0.0 2.5240115740476 0.0 33 9.149444743072154E-5 0.0 0.0 2.607957729565287 0.0 34 9.149444743072154E-5 0.0 0.0 2.7038896576963984 0.0 35 9.149444743072154E-5 0.0 0.0 2.8282763589784645 0.0 36 9.149444743072154E-5 0.0 0.0 2.9298351956265654 0.0 37 9.149444743072154E-5 0.0 0.0 3.0309823072612283 0.0 38 1.372416711460823E-4 0.0 0.0 3.1373903496231574 0.0 39 1.372416711460823E-4 0.0 0.0 3.2612738314443543 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGC 20 7.034684E-4 45.000004 37 CCGTCGA 20 7.034684E-4 45.000004 17 GTCGTAA 30 2.1664036E-6 45.000004 31 ATGCGTA 40 6.8193913E-9 45.000004 42 CGTCCAC 55 1.8189894E-12 45.000004 35 GTCGAAC 25 3.891965E-5 45.0 9 CGCGACG 25 3.891965E-5 45.0 28 AATGCGC 25 3.891965E-5 45.0 23 CGTCCCG 35 1.2125929E-7 45.0 37 CAATCGT 25 3.891965E-5 45.0 18 TGCGTAG 110 0.0 42.954548 1 CGGTCTA 545 0.0 42.935776 31 CGTTTTT 7175 0.0 41.26829 1 ACGGGTA 55 6.184564E-11 40.909092 5 GCTACGG 55 6.184564E-11 40.909092 2 TTTCGCG 50 1.0822987E-9 40.5 1 AATATCG 50 1.0822987E-9 40.5 25 CGACGGT 595 0.0 40.084034 28 GTTAGCG 90 0.0 40.0 1 AGCGAAT 90 0.0 40.0 43 >>END_MODULE