SRR1547703_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547703_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1615797
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9080	0.5619517798337291	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3030	0.18752355648636554	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAG	20	7.0341374E-4	45.0	20
GGCGTAG	80	0.0	45.0	1
CGTTCGA	20	7.0341374E-4	45.0	25
TAACCGT	25	3.8915106E-5	45.0	27
TATTCGT	25	3.8915106E-5	45.0	33
GCGATCG	20	7.0341374E-4	45.0	9
TCGTAAG	100	0.0	45.0	1
ATAACCG	25	3.8915106E-5	45.0	26
TCGACTA	20	7.0341374E-4	45.0	37
TCGCGAC	20	7.0341374E-4	45.0	19
ACGACGT	20	7.0341374E-4	45.0	21
CGACGGT	415	0.0	44.457832	28
GCGATAA	125	0.0	43.2	9
TCACGAC	445	0.0	42.977528	25
CTCACGA	450	0.0	42.5	24
TCTCACG	450	0.0	42.5	23
CGTTTTT	5915	0.0	42.375317	1
CGCATCG	85	0.0	42.35294	21
ACGGGTC	75	0.0	42.000004	5
CGGTCTA	435	0.0	41.896553	31