##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547703_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1615797 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.69908658080192 31.0 31.0 33.0 30.0 34.0 2 32.07897341064503 33.0 31.0 34.0 30.0 34.0 3 32.13032949064765 33.0 31.0 34.0 30.0 34.0 4 35.829217407879824 37.0 35.0 37.0 35.0 37.0 5 35.76157524738566 37.0 35.0 37.0 35.0 37.0 6 35.82257053330338 37.0 35.0 37.0 35.0 37.0 7 36.15516491242403 37.0 35.0 37.0 35.0 37.0 8 36.05983548675979 37.0 35.0 37.0 35.0 37.0 9 37.86368213333729 39.0 38.0 39.0 35.0 39.0 10 37.51718811212052 39.0 37.0 39.0 35.0 39.0 11 37.174586287757684 39.0 37.0 39.0 34.0 39.0 12 36.42707592599813 38.0 35.0 39.0 33.0 39.0 13 36.150754704953656 38.0 35.0 39.0 32.0 39.0 14 37.033620560008465 39.0 35.0 41.0 32.0 41.0 15 37.2993476284459 39.0 35.0 41.0 33.0 41.0 16 37.42328832149088 39.0 35.0 41.0 33.0 41.0 17 37.32968869232954 39.0 35.0 41.0 33.0 41.0 18 37.247157904117906 39.0 35.0 41.0 33.0 41.0 19 37.225784550905836 39.0 35.0 41.0 33.0 41.0 20 37.11220530796876 38.0 35.0 41.0 32.0 41.0 21 36.98024628093752 38.0 35.0 41.0 32.0 41.0 22 36.95418360103404 38.0 35.0 41.0 32.0 41.0 23 36.88928869158688 38.0 35.0 41.0 32.0 41.0 24 36.87356023064778 38.0 35.0 41.0 32.0 41.0 25 36.80337443379335 38.0 35.0 41.0 32.0 41.0 26 36.77664582865298 38.0 35.0 41.0 32.0 41.0 27 36.68743474582512 38.0 35.0 41.0 32.0 41.0 28 36.685242019882445 38.0 35.0 41.0 32.0 41.0 29 36.62940146565441 38.0 35.0 40.0 32.0 41.0 30 36.61888219869204 38.0 35.0 41.0 32.0 41.0 31 36.44560053026463 38.0 35.0 41.0 31.0 41.0 32 36.25879241018519 38.0 35.0 41.0 31.0 41.0 33 36.16521567993999 38.0 35.0 41.0 30.0 41.0 34 35.97451103077924 38.0 35.0 41.0 30.0 41.0 35 35.87189603644517 38.0 35.0 41.0 30.0 41.0 36 35.784073741936645 38.0 35.0 41.0 30.0 41.0 37 35.5319622452573 38.0 35.0 40.0 29.0 41.0 38 35.62023509141309 38.0 35.0 40.0 29.0 41.0 39 35.56583159889516 38.0 35.0 40.0 29.0 41.0 40 35.4316959370515 38.0 35.0 40.0 28.0 41.0 41 35.3804308338238 38.0 35.0 40.0 28.0 41.0 42 35.42801725711831 37.0 35.0 40.0 29.0 41.0 43 35.34582562042138 37.0 35.0 40.0 28.0 41.0 44 35.22334798245077 37.0 34.0 40.0 28.0 41.0 45 35.210577813920935 37.0 34.0 40.0 28.0 41.0 46 35.047019520397676 37.0 34.0 40.0 27.0 41.0 47 34.91203597976726 37.0 34.0 40.0 27.0 41.0 48 34.80410967466829 36.0 34.0 40.0 26.0 41.0 49 34.86016003247933 36.0 34.0 40.0 27.0 41.0 50 34.74017713858857 36.0 34.0 40.0 27.0 41.0 51 34.14239350611494 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 1.0 12 5.0 13 8.0 14 18.0 15 42.0 16 69.0 17 257.0 18 516.0 19 1120.0 20 1974.0 21 3169.0 22 4976.0 23 7149.0 24 10459.0 25 15817.0 26 21010.0 27 24943.0 28 26330.0 29 28983.0 30 34296.0 31 41868.0 32 53787.0 33 73319.0 34 140685.0 35 234859.0 36 98393.0 37 129604.0 38 214326.0 39 447705.0 40 105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.66653979429347 23.173146131599452 30.031619070960026 15.128695003147053 2 30.50042796217594 25.890257253850578 31.05705729123151 12.552257492741973 3 29.213261319336524 24.584400144325063 32.71524826447877 13.487090271859644 4 26.48909485535621 27.071531881789607 31.97115726789937 14.46821599495481 5 24.27879244731857 31.732513428357645 30.16263800465034 13.82605611967345 6 22.71362058476405 40.12218118984006 26.488537854693377 10.675660370702508 7 87.63235728250517 4.103980883737251 6.636724786591384 1.6269370471661972 8 89.1025914765283 2.663020168994001 6.672929829675386 1.5614585248023112 9 85.53172211608265 5.18363383519093 7.184380216079124 2.100263832647294 10 48.04737228748414 31.756588234784445 12.463818165276951 7.732221312454472 11 41.06914420561494 20.359240671940846 24.63929565409516 13.932319468349055 12 38.097236224599996 21.154761396388285 25.833876408979595 14.914125970032128 13 24.95146358113055 33.24712200851964 25.812772272754557 15.988642137595255 14 16.81127022763379 36.83463949988767 29.470471847639278 16.88361842483926 15 16.4381416724997 27.066952098561885 42.26230151436102 14.232604714577388 16 21.09188221045094 23.491502954888517 39.66073708516602 15.755877749494521 17 20.929485572754498 23.001032926784738 28.514596821259108 27.554884679201656 18 23.53773400990347 25.32174524398795 32.88389568739142 18.25662505871715 19 26.51007521365617 27.277869682887147 27.1124404860264 19.099614617430284 20 28.352385850450272 27.20607848634451 27.01836926297053 17.42316640023468 21 24.35312109132521 26.54819881457881 31.44033563622163 17.65834445787435 22 23.377751041745963 21.86246168299607 31.000862113248136 23.75892516200983 23 19.309356311467344 27.56070224168011 30.471897150446498 22.658044296406047 24 20.291781702775783 25.185465748482017 37.10230926285914 17.420443285883067 25 19.026771308524523 26.560019606423328 33.48520884739853 20.928000237653617 26 18.156055494594927 32.55934996784868 28.27236342189025 21.01223111566614 27 17.1569819723641 33.16821358128527 31.64630210354395 18.028502342806675 28 14.95218768199223 30.04127374911576 36.279495505932985 18.727043062959023 29 16.808547113282177 26.664550064147907 36.39819853607848 20.128704286491434 30 19.559882831816125 29.47226662755284 33.15063711592484 17.817213424706196 31 26.7451913823333 26.60259921264862 28.88599248544217 17.76621691957591 32 27.493800273177882 27.14066185294316 28.630081625352688 16.73545624852627 33 26.490765857344705 27.64883212433245 26.706201335935148 19.1542006823877 34 19.95355852251242 28.422382267079342 30.508535416268256 21.115523794139982 35 19.198513179564017 28.69036147486349 31.210603807285196 20.900521538287297 36 26.82013891596531 26.65619505420545 28.83066375293431 17.69300227689493 37 20.532220322231073 31.65651378236251 29.75788418965996 18.053381705746453 38 20.73453534076372 31.78487149066374 26.228480434113937 21.2521127344586 39 20.965009837250594 29.99040102191055 28.739377533192602 20.305211607646257 40 23.270930692407525 26.897438230173716 27.048014076025638 22.783617001393118 41 18.09342386450773 25.977953913765155 29.7235977044146 26.20502451731251 42 21.230822931345955 25.267221067993074 28.686771915036356 24.815184085624615 43 21.58179523789189 26.043494325091583 28.044055039092164 24.330655397924367 44 19.455785596829305 30.049566870095685 28.926034644203447 21.56861288887156 45 19.01297006987883 33.51974288849404 25.87398045670341 21.593306584923724 46 22.327433458534703 30.763208497107 27.48959182372538 19.419766220632916 47 21.261829301576867 28.668390893162943 28.304298126559214 21.765481678700976 48 22.658044296406047 27.01081880954105 30.59140473710497 19.739732156947934 49 22.80323580251727 24.591579263979323 31.383707235500495 21.221477698002904 50 20.134955071707648 31.034962931605886 28.52672705791631 20.303354938770156 51 18.897113932010022 31.39837491962171 27.471953469402404 22.23255767896586 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1443.0 1 2257.5 2 3072.0 3 9698.5 4 16325.0 5 11452.0 6 6579.0 7 6747.5 8 6916.0 9 7348.0 10 7780.0 11 7808.0 12 7836.0 13 7862.5 14 7889.0 15 7303.5 16 6718.0 17 6343.5 18 5969.0 19 5912.0 20 5855.0 21 6542.5 22 7230.0 23 7805.5 24 8381.0 25 10370.5 26 15839.0 27 19318.0 28 22677.5 29 26037.0 30 29079.5 31 32122.0 32 38742.0 33 45362.0 34 47579.0 35 49796.0 36 55098.5 37 60401.0 38 67507.0 39 74613.0 40 92330.0 41 110047.0 42 125646.0 43 141245.0 44 147543.5 45 153842.0 46 148095.0 47 142348.0 48 133145.5 49 123943.0 50 118644.5 51 113346.0 52 104412.0 53 95478.0 54 84999.5 55 74521.0 56 72039.5 57 69558.0 58 63690.5 59 57823.0 60 50771.0 61 43719.0 62 37782.0 63 31845.0 64 25685.5 65 19526.0 66 16028.0 67 12530.0 68 9393.5 69 6257.0 70 5097.0 71 3937.0 72 2765.5 73 1594.0 74 1314.0 75 833.0 76 632.0 77 422.0 78 212.0 79 187.5 80 163.0 81 126.5 82 90.0 83 61.5 84 33.0 85 42.5 86 52.0 87 34.0 88 16.0 89 9.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1615797.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.55299545048278 #Duplication Level Percentage of deduplicated Percentage of total 1 81.39910485642228 15.101972220745733 2 6.206068318697215 2.3028231456434947 3 1.9972110391452045 1.1116274196874487 4 1.011610674288699 0.750736329509522 5 0.6460262001201861 0.5992860575861246 6 0.46718110939637836 0.5200565398309502 7 0.37458170452031087 0.48647288618595885 8 0.3019271555012609 0.44813225139136803 9 0.2687672391740385 0.44877936290712783 >10 3.992574736158711 18.67231095957395 >50 2.152813028230338 29.41713400532313 >100 1.1777705819574715 28.95924836021982 >500 0.003692070789835181 0.4273090452295515 >1k 3.356427990759256E-4 0.1886835335245615 >5k 3.356427990759256E-4 0.5654278826412601 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9080 0.5619517798337291 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3030 0.18752355648636554 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.188896253675431E-5 0.0 0.0 0.030944481268377153 0.0 2 6.188896253675431E-5 0.0 0.0 0.1198789204336931 0.0 3 6.188896253675431E-5 0.0 0.0 0.16332497213449462 0.0 4 6.188896253675431E-5 0.0 0.0 0.2276894931727191 0.0 5 6.188896253675431E-5 0.0 0.0 0.3765324480736132 0.0 6 6.188896253675431E-5 0.0 0.0 0.48768502478962394 0.0 7 6.188896253675431E-5 0.0 0.0 0.5690071215629191 0.0 8 6.188896253675431E-5 0.0 0.0 0.7173549647635192 0.0 9 6.188896253675431E-5 0.0 0.0 0.778129925974612 0.0 10 6.188896253675431E-5 0.0 0.0 0.9001749600970914 0.0 11 6.188896253675431E-5 0.0 0.0 1.1049655371312115 0.0 12 6.188896253675431E-5 0.0 0.0 1.2641439487757435 0.0 13 6.188896253675431E-5 0.0 0.0 1.3330882530416879 0.0 14 6.188896253675431E-5 0.0 0.0 1.3933681025524864 0.0 15 6.188896253675431E-5 0.0 0.0 1.447149610996926 0.0 16 6.188896253675431E-5 0.0 0.0 1.5492045102200338 0.0 17 6.188896253675431E-5 0.0 0.0 1.660790309673802 0.0 18 6.188896253675431E-5 0.0 0.0 1.7914379095888902 0.0 19 6.188896253675431E-5 0.0 0.0 1.8795059032786916 0.0 20 6.188896253675431E-5 0.0 0.0 1.972339347083823 0.0 21 6.188896253675431E-5 0.0 0.0 2.096488605932552 0.0 22 6.188896253675431E-5 0.0 0.0 2.2181004173172743 0.0 23 6.188896253675431E-5 0.0 0.0 2.350233352333245 0.0 24 6.188896253675431E-5 0.0 0.0 2.4422622396253986 0.0 25 6.188896253675431E-5 0.0 0.0 2.524141337061524 0.0 26 6.188896253675431E-5 0.0 0.0 2.6160464464286046 0.0 27 6.188896253675431E-5 0.0 0.0 2.718410790464396 0.0 28 6.188896253675431E-5 0.0 0.0 2.810192121906403 0.0 29 6.188896253675431E-5 0.0 0.0 2.927286039025942 0.0 30 6.188896253675431E-5 0.0 0.0 3.0549010797767293 0.0 31 6.188896253675431E-5 0.0 0.0 3.159245870613697 0.0 32 6.188896253675431E-5 0.0 0.0 3.254740539807909 0.0 33 6.188896253675431E-5 0.0 0.0 3.3574762176189212 0.0 34 6.188896253675431E-5 0.0 0.0 3.4702997963234243 0.0 35 6.188896253675431E-5 0.0 0.0 3.6010711741635864 0.0 36 6.188896253675431E-5 0.0 0.0 3.709933859265737 0.0 37 6.188896253675431E-5 0.0 0.0 3.835135230477591 0.0 38 6.188896253675431E-5 0.0 0.0 3.97797495601242 0.0 39 6.188896253675431E-5 0.0 0.0 4.209563453824955 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAG 20 7.0341374E-4 45.0 20 GGCGTAG 80 0.0 45.0 1 CGTTCGA 20 7.0341374E-4 45.0 25 TAACCGT 25 3.8915106E-5 45.0 27 TATTCGT 25 3.8915106E-5 45.0 33 GCGATCG 20 7.0341374E-4 45.0 9 TCGTAAG 100 0.0 45.0 1 ATAACCG 25 3.8915106E-5 45.0 26 TCGACTA 20 7.0341374E-4 45.0 37 TCGCGAC 20 7.0341374E-4 45.0 19 ACGACGT 20 7.0341374E-4 45.0 21 CGACGGT 415 0.0 44.457832 28 GCGATAA 125 0.0 43.2 9 TCACGAC 445 0.0 42.977528 25 CTCACGA 450 0.0 42.5 24 TCTCACG 450 0.0 42.5 23 CGTTTTT 5915 0.0 42.375317 1 CGCATCG 85 0.0 42.35294 21 ACGGGTC 75 0.0 42.000004 5 CGGTCTA 435 0.0 41.896553 31 >>END_MODULE