SRR1547702_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547702_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1398291
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6028	0.4310976756626482	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2192	0.1567627911500539	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGCGTC	25	3.8912403E-5	45.000004	16
CGACTAT	25	3.8912403E-5	45.000004	17
GTACGTT	25	3.8912403E-5	45.000004	40
GTCGACG	20	7.033812E-4	45.0	12
CACGCGT	20	7.033812E-4	45.0	43
CACGATA	40	6.8175723E-9	45.0	16
CACGACG	190	0.0	45.0	26
CGTTCGA	20	7.033812E-4	45.0	43
CTAACCG	20	7.033812E-4	45.0	1
TACGACG	20	7.033812E-4	45.0	1
ACGTCCG	20	7.033812E-4	45.0	24
CGCACCG	20	7.033812E-4	45.0	26
CGACTAA	40	6.8175723E-9	45.0	6
CGGTACG	20	7.033812E-4	45.0	31
CCACGCG	20	7.033812E-4	45.0	42
TCGACTA	20	7.033812E-4	45.0	45
ATCGACT	20	7.033812E-4	45.0	44
AATCGAC	20	7.033812E-4	45.0	43
CGGACTA	20	7.033812E-4	45.0	20
CGACGGT	205	0.0	41.70732	28