##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547702_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1398291 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.661511087463197 31.0 31.0 33.0 30.0 34.0 2 32.045316747372325 33.0 31.0 34.0 30.0 34.0 3 32.10505753094313 33.0 31.0 34.0 30.0 34.0 4 35.79812070591887 37.0 35.0 37.0 35.0 37.0 5 35.72228813601747 37.0 35.0 37.0 33.0 37.0 6 35.786553013643086 37.0 35.0 37.0 35.0 37.0 7 36.12919914381198 37.0 35.0 37.0 35.0 37.0 8 36.02728974154879 37.0 35.0 37.0 35.0 37.0 9 37.83272294536688 39.0 38.0 39.0 35.0 39.0 10 37.46991792123385 39.0 37.0 39.0 35.0 39.0 11 37.1144354072221 39.0 37.0 39.0 33.0 39.0 12 36.40549785416626 38.0 35.0 39.0 33.0 39.0 13 36.13964403689933 38.0 35.0 39.0 32.0 39.0 14 37.111634130520756 39.0 35.0 41.0 32.0 41.0 15 37.359476675455966 39.0 35.0 41.0 33.0 41.0 16 37.49363472982376 39.0 35.0 41.0 33.0 41.0 17 37.41550578527646 39.0 35.0 41.0 33.0 41.0 18 37.33211899382889 39.0 35.0 41.0 33.0 41.0 19 37.302486392317476 39.0 35.0 41.0 33.0 41.0 20 37.19082723124156 39.0 35.0 41.0 33.0 41.0 21 37.04338724914914 39.0 35.0 41.0 32.0 41.0 22 36.99584921879637 39.0 35.0 41.0 32.0 41.0 23 36.92681137188182 38.0 35.0 41.0 32.0 41.0 24 36.90850616931669 38.0 35.0 41.0 32.0 41.0 25 36.84900925486898 38.0 35.0 41.0 32.0 41.0 26 36.79935864566102 38.0 35.0 41.0 32.0 41.0 27 36.71825249536756 38.0 35.0 41.0 32.0 41.0 28 36.7354327532681 38.0 35.0 41.0 32.0 41.0 29 36.69054367080958 38.0 35.0 41.0 32.0 41.0 30 36.709699912250024 38.0 35.0 41.0 32.0 41.0 31 36.56146181302748 38.0 35.0 41.0 31.0 41.0 32 36.3789032468921 38.0 35.0 41.0 31.0 41.0 33 36.311056139244265 38.0 35.0 41.0 31.0 41.0 34 36.15017617935037 38.0 35.0 41.0 30.0 41.0 35 36.05741222678255 38.0 35.0 41.0 30.0 41.0 36 35.94737790631564 38.0 35.0 41.0 30.0 41.0 37 35.69043925763664 38.0 35.0 40.0 29.0 41.0 38 35.8134851758325 38.0 35.0 40.0 30.0 41.0 39 35.76738318418698 38.0 35.0 40.0 29.0 41.0 40 35.65787450537835 38.0 35.0 40.0 29.0 41.0 41 35.61114031342546 38.0 35.0 40.0 29.0 41.0 42 35.62518817613787 38.0 35.0 40.0 29.0 41.0 43 35.53343116704606 38.0 35.0 40.0 29.0 41.0 44 35.417983095078206 38.0 34.0 40.0 29.0 41.0 45 35.40495290322258 37.0 34.0 40.0 28.0 41.0 46 35.24260972859012 37.0 34.0 40.0 28.0 41.0 47 35.12891594095936 37.0 34.0 40.0 27.0 41.0 48 35.020306931818915 37.0 34.0 40.0 27.0 41.0 49 35.10062569236303 37.0 34.0 40.0 27.0 41.0 50 34.95855226129611 37.0 34.0 40.0 27.0 41.0 51 34.346366385823835 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 5.0 13 4.0 14 22.0 15 29.0 16 75.0 17 257.0 18 476.0 19 933.0 20 1665.0 21 2646.0 22 4106.0 23 5956.0 24 8841.0 25 13091.0 26 17813.0 27 20679.0 28 22525.0 29 24370.0 30 28906.0 31 35817.0 32 45350.0 33 60744.0 34 113758.0 35 203583.0 36 83540.0 37 111438.0 38 186531.0 39 405024.0 40 103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.40891917347676 23.773020065208172 30.008703481607192 13.809357279707871 2 30.81182672276372 25.268703009602433 30.243490088972898 13.675980178660952 3 29.739160160510224 24.341070635511493 32.35857199967675 13.561197204301537 4 26.707459319984178 27.182324709234347 31.05004609197942 15.060169878802052 5 24.20168620122707 32.17248770105793 29.399745832591357 14.226080265123638 6 22.779163993760957 40.40160453010139 26.05387576691833 10.765355709219325 7 88.3615070110585 3.82502640723569 6.168172433348995 1.6452941483568155 8 89.55789603165579 2.9807100238791495 5.8911199457051495 1.5702739987599148 9 85.61794361831693 5.319922677039329 6.729142932336687 2.332990772307052 10 48.40930821981976 32.48250900563617 11.513054149672708 7.595128624871361 11 39.39666349851354 21.166838662338527 25.37662046026185 14.059877378886082 12 36.68735620840011 21.80468872359187 26.747365176490444 14.760589891517572 13 23.307022644070514 34.84567947587448 25.85499012723389 15.992307752821123 14 15.472458880161568 39.292965484294754 29.56401779028829 15.670557845255386 15 14.737847844261315 27.842630754256447 43.195086001411724 14.224435400070515 16 19.002482315912783 24.27026992235522 41.35154985621734 15.37569790551466 17 19.40125481748792 23.50483554567683 28.69910483583174 28.39480480100351 18 21.80454569184812 26.115736996090227 33.73274947775535 18.34696783430631 19 26.572580385627887 26.664907376218537 27.65332824140326 19.109183996750318 20 28.723777811628626 27.09285835351869 27.222159049868733 16.961204784983956 21 23.93199984838635 26.776329104599828 30.785937977144958 18.505733069868864 22 23.457635070239313 22.794825969701584 30.316579310029173 23.43095965002993 23 18.716347312540808 28.019131926044004 29.824764659144627 23.439756102270557 24 19.302848977787885 26.32384818324655 37.712035620625464 16.661267218340104 25 18.397171976362575 27.946042704987732 33.716229311352215 19.94055600729748 26 17.407535341355985 35.274417127765254 27.608058694506365 19.7099888363724 27 17.33394550919658 34.128732860327354 31.419711633701425 17.117609996774636 28 15.451361697958435 30.185133137522875 37.42647274422849 16.937032420290198 29 16.309623676330606 25.98143018870893 37.744432310584855 19.96451382437561 30 19.026297101247167 30.38830972951982 32.379955245367384 18.205437923865635 31 26.256480231940277 28.47690502191604 27.23589009726874 18.030724648874948 32 26.707387804112305 28.292966199453474 28.403815800859768 16.595830195574454 33 26.089776734599596 28.797367643788025 26.94946903040926 18.163386591203118 34 19.00348353811903 29.8884137851134 29.115756305375633 21.992346371391935 35 19.596064052475487 28.416617141925393 30.94634807776064 21.04097072783848 36 27.101583289887444 26.06367344136521 29.082358393209994 17.752384875537352 37 20.158965480003804 31.437805149285808 30.495941116691732 17.907288254018656 38 19.519613585441085 31.988763426210998 26.644024741631036 21.847598246716885 39 19.480851982884822 31.070428115463805 29.40103311828511 20.047686783366267 40 23.010088744045408 27.376275753759412 27.711113065878273 21.902522436316904 41 18.654843662728286 26.275145874499657 29.677441963082074 25.392568499689975 42 21.767285922601232 25.467374101671254 27.921298213318973 24.84404176240854 43 22.10312445692635 27.083918869534312 27.436706665493805 23.376250008045535 44 19.374722429022285 30.246851334951025 29.56437536964766 20.81405086637903 45 18.391450706612574 35.906474403396714 25.098852813899253 20.603222076091456 46 22.479011879501478 31.88249084060471 26.713609684965434 18.92488759492838 47 21.215684002829168 30.027726703525946 27.187187788521843 21.56940150512304 48 22.377030246207692 26.859072968359232 30.963940982241894 19.799955803191178 49 21.19587410631979 25.583086782365044 31.72601411294216 21.49502499837301 50 19.75397109757554 31.95028788714223 28.46038485551291 19.83535615976932 51 18.682234241656424 33.46957106925525 26.05716549702458 21.79102919206374 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 940.0 1 1545.0 2 2150.0 3 6324.5 4 10499.0 5 7668.0 6 4837.0 7 5105.0 8 5373.0 9 5753.0 10 6133.0 11 6123.0 12 6113.0 13 5966.5 14 5820.0 15 5719.5 16 5619.0 17 5420.5 18 5222.0 19 5499.0 20 5776.0 21 5874.0 22 5972.0 23 8023.0 24 10074.0 25 11157.5 26 13651.5 27 15062.0 28 19240.5 29 23419.0 30 27544.0 31 31669.0 32 37200.5 33 42732.0 34 46095.0 35 49458.0 36 52792.5 37 56127.0 38 61540.0 39 66953.0 40 83764.0 41 100575.0 42 118435.0 43 136295.0 44 140196.0 45 144097.0 46 136042.5 47 127988.0 48 119586.0 49 111184.0 50 104464.0 51 97744.0 52 88826.5 53 79909.0 54 69978.5 55 60048.0 56 54628.0 57 49208.0 58 44833.0 59 40458.0 60 34754.5 61 29051.0 62 23859.0 63 18667.0 64 15518.0 65 12369.0 66 9909.5 67 7450.0 68 5930.0 69 4410.0 70 3582.0 71 2754.0 72 2305.0 73 1856.0 74 1459.0 75 830.0 76 598.0 77 376.5 78 155.0 79 135.5 80 116.0 81 90.0 82 64.0 83 46.0 84 28.0 85 18.0 86 8.0 87 4.5 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 2.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1398291.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.327236091460854 #Duplication Level Percentage of deduplicated Percentage of total 1 81.7908371816918 14.989999831471005 2 6.002302632193242 2.2001123486520493 3 1.7703967962313734 0.9733944018029487 4 0.8988246147769308 0.6589188367933265 5 0.5869119162599626 0.537823662709402 6 0.4308126178730509 0.4737362735363827 7 0.34960603080182007 0.44851185858524434 8 0.2818398624411188 0.4132276559154588 9 0.2537298159491654 0.4185149616308937 >10 4.067155197981742 19.273934706378054 >50 2.466574284806793 33.01655276139922 >100 1.0994389826129536 25.922585671025345 >500 7.850331900128195E-4 0.08136124810650137 >1k 3.9251659500640974E-4 0.1576868751984536 >5k 3.9251659500640974E-4 0.4336389067957474 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6028 0.4310976756626482 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2192 0.1567627911500539 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019809896509381808 0.0 2 0.0 0.0 0.0 0.07859594319065202 0.0 3 0.0 0.0 0.0 0.11156476012503835 0.0 4 0.0 0.0 0.0 0.15990948951255496 0.0 5 0.0 0.0 0.0 0.2839895272157226 0.0 6 0.0 0.0 0.0 0.3876875414345083 0.0 7 0.0 0.0 0.0 0.4575585482564073 0.0 8 0.0 0.0 0.0 0.604952760190833 0.0 9 0.0 0.0 0.0 0.6505083705752236 0.0 10 0.0 0.0 0.0 0.7463396388877566 0.0 11 0.0 0.0 0.0 0.9014575649846849 0.0 12 0.0 0.0 0.0 1.015310833009724 0.0 13 0.0 0.0 0.0 1.061438570369115 0.0 14 0.0 0.0 0.0 1.0818205938534968 0.0 15 0.0 0.0 0.0 1.1152185060191333 0.0 16 0.0 0.0 0.0 1.1918120047972847 0.0 17 0.0 0.0 0.0 1.283137773181691 0.0 18 0.0 0.0 0.0 1.4048577871129828 0.0 19 0.0 0.0 0.0 1.4766597224755076 0.0 20 0.0 0.0 0.0 1.5513938085849084 0.0 21 0.0 0.0 0.0 1.6503717752599423 0.0 22 0.0 0.0 0.0 1.762866241719356 0.0 23 0.0 0.0 0.0 1.8846577715225228 0.0 24 0.0 0.0 0.0 1.9742671589819287 0.0 25 0.0 0.0 0.0 2.048357602244454 0.0 26 0.0 0.0 0.0 2.1267389978194813 0.0 27 0.0 0.0 0.0 2.2024027902632572 0.0 28 0.0 0.0 0.0 2.2862909079726608 0.0 29 0.0 0.0 0.0 2.3864131285976953 0.0 30 0.0 0.0 0.0 2.500838523597735 0.0 31 0.0 0.0 0.0 2.6136190535446486 0.0 32 0.0 0.0 0.0 2.7070187822134306 0.0 33 0.0 0.0 0.0 2.804566431450964 0.0 34 0.0 0.0 0.0 2.9142002630353767 0.0 35 0.0 0.0 0.0 3.046933721235422 0.0 36 0.0 0.0 0.0 3.1645773304698377 0.0 37 0.0 0.0 0.0 3.2851530904511295 0.0 38 0.0 0.0 0.0 3.4106634455917972 0.0 39 0.0 0.0 0.0 3.587307649123108 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGCGTC 25 3.8912403E-5 45.000004 16 CGACTAT 25 3.8912403E-5 45.000004 17 GTACGTT 25 3.8912403E-5 45.000004 40 GTCGACG 20 7.033812E-4 45.0 12 CACGCGT 20 7.033812E-4 45.0 43 CACGATA 40 6.8175723E-9 45.0 16 CACGACG 190 0.0 45.0 26 CGTTCGA 20 7.033812E-4 45.0 43 CTAACCG 20 7.033812E-4 45.0 1 TACGACG 20 7.033812E-4 45.0 1 ACGTCCG 20 7.033812E-4 45.0 24 CGCACCG 20 7.033812E-4 45.0 26 CGACTAA 40 6.8175723E-9 45.0 6 CGGTACG 20 7.033812E-4 45.0 31 CCACGCG 20 7.033812E-4 45.0 42 TCGACTA 20 7.033812E-4 45.0 45 ATCGACT 20 7.033812E-4 45.0 44 AATCGAC 20 7.033812E-4 45.0 43 CGGACTA 20 7.033812E-4 45.0 20 CGACGGT 205 0.0 41.70732 28 >>END_MODULE