##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547699_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1301509 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.578326388830195 31.0 31.0 33.0 30.0 34.0 2 31.968974475013233 31.0 31.0 34.0 30.0 34.0 3 32.04334199763505 33.0 31.0 34.0 30.0 34.0 4 35.75295829686925 37.0 35.0 37.0 35.0 37.0 5 35.678062925419646 37.0 35.0 37.0 33.0 37.0 6 35.72892158256301 37.0 35.0 37.0 33.0 37.0 7 36.075407853499286 37.0 35.0 37.0 35.0 37.0 8 35.9757112705329 37.0 35.0 37.0 35.0 37.0 9 37.80603438009265 39.0 38.0 39.0 35.0 39.0 10 37.36972698613686 39.0 37.0 39.0 34.0 39.0 11 37.107444512485124 39.0 37.0 39.0 33.0 39.0 12 36.45952890068374 38.0 35.0 39.0 33.0 39.0 13 36.19550844442874 38.0 35.0 39.0 32.0 39.0 14 37.180999132545374 39.0 35.0 41.0 32.0 41.0 15 37.40230071401734 39.0 35.0 41.0 33.0 41.0 16 37.51130495447976 39.0 35.0 41.0 33.0 41.0 17 37.43198241425914 39.0 35.0 41.0 33.0 41.0 18 37.322673911590314 39.0 35.0 41.0 32.0 41.0 19 37.28322892888178 39.0 35.0 41.0 32.0 41.0 20 37.179421732773264 39.0 35.0 41.0 32.0 41.0 21 37.03467436644695 39.0 35.0 41.0 32.0 41.0 22 36.9954237734814 39.0 35.0 41.0 32.0 41.0 23 36.91095720429133 38.0 35.0 41.0 32.0 41.0 24 36.88664081462364 38.0 35.0 41.0 32.0 41.0 25 36.81975998629284 38.0 35.0 41.0 32.0 41.0 26 36.778491735362564 38.0 35.0 41.0 32.0 41.0 27 36.68500256241025 38.0 35.0 41.0 31.0 41.0 28 36.69196063953457 38.0 35.0 41.0 31.0 41.0 29 36.64842886218997 38.0 35.0 40.0 31.0 41.0 30 36.64861095851047 38.0 35.0 41.0 31.0 41.0 31 36.51771059593134 38.0 35.0 41.0 31.0 41.0 32 36.324432639344025 38.0 35.0 41.0 31.0 41.0 33 36.250891081045154 38.0 35.0 41.0 30.0 41.0 34 36.074691761639755 38.0 35.0 41.0 30.0 41.0 35 35.96445817892923 38.0 35.0 41.0 30.0 41.0 36 35.872392737968006 38.0 35.0 41.0 30.0 41.0 37 35.60431622063312 38.0 35.0 40.0 28.0 41.0 38 35.715504080263756 38.0 35.0 40.0 29.0 41.0 39 35.64754296743242 38.0 35.0 40.0 29.0 41.0 40 35.51828531343233 38.0 35.0 40.0 28.0 41.0 41 35.458361793886944 38.0 35.0 40.0 28.0 41.0 42 35.46848465896125 38.0 35.0 40.0 28.0 41.0 43 35.375172972296006 38.0 34.0 40.0 28.0 41.0 44 35.24533061238916 37.0 34.0 40.0 27.0 41.0 45 35.22401765950139 37.0 34.0 40.0 27.0 41.0 46 35.04771154098819 37.0 34.0 40.0 27.0 41.0 47 34.922763499906644 37.0 34.0 40.0 26.0 41.0 48 34.796076707882925 37.0 34.0 40.0 26.0 41.0 49 34.86262254045112 36.0 34.0 40.0 27.0 41.0 50 34.72312139216863 36.0 34.0 40.0 26.0 41.0 51 34.111184017936104 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 2.0 12 3.0 13 13.0 14 13.0 15 33.0 16 96.0 17 196.0 18 474.0 19 898.0 20 1647.0 21 2540.0 22 3981.0 23 5773.0 24 8676.0 25 12292.0 26 17019.0 27 20623.0 28 22175.0 29 24428.0 30 28363.0 31 34292.0 32 43609.0 33 57893.0 34 104043.0 35 175374.0 36 84263.0 37 112702.0 38 183333.0 39 356680.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.015145496496764 22.529233374490687 30.34877207917886 15.106849049833693 2 30.551152546774553 24.8042848724058 31.29152391570093 13.353038665118719 3 28.782590055082213 23.99699118484774 34.09911110872073 13.121307651349317 4 25.734743286446733 26.358096640130803 32.74437595129961 15.162784122122858 5 23.57002525529981 30.8537244075915 31.782185140479243 13.794065196629452 6 21.114029945240485 39.75915648681646 28.021934539061967 11.104879028881092 7 87.48652525645232 3.577155440338868 6.709903657984693 2.2264156452241206 8 89.38378451474404 2.4990222887432973 6.484626691017888 1.6325665054947758 9 86.21338769074973 3.8125744808526103 7.426917524196913 2.5471203042007393 10 45.69357568791303 25.75410542685452 15.09924249467349 13.45307639055896 11 37.3525653683532 25.436397289607676 22.35512777860161 14.855909563437516 12 35.62695302145433 21.65056100265154 26.04223251625613 16.680253459638006 13 23.543671230855875 31.87569198522638 26.148416952936937 18.43221983098081 14 16.837839769068058 35.35788073689848 29.390115627321823 18.41416386671164 15 15.897008779808669 26.304159248994818 41.5917216093012 16.207110361895307 16 20.759595208331252 22.939372682017567 39.044601305100464 17.256430804550718 17 21.433889431421527 22.453090988998156 27.436537127288403 28.676482452291918 18 23.009522024050543 26.05314292870814 31.782261974369753 19.155073072871566 19 27.248601431108042 25.944576641421612 27.30038747330983 19.50643445416052 20 28.605257435791838 26.239388279297337 26.98037431934777 18.17497996556305 21 24.58623029114666 26.343959204277496 30.266482982445766 18.803327522130083 22 24.940127190822345 20.96919806163461 30.020384031151533 24.07029071639151 23 20.6842979956343 26.53750377446487 28.940022696731255 23.838175533169576 24 20.924327069578467 24.55134770485644 35.38723128307219 19.137093942492907 25 19.79287119797097 26.15417949472497 32.87061403340277 21.182335273901295 26 19.086076239196196 32.06247517304913 27.719285844354513 21.13216274340016 27 19.170977688206538 31.51726188601078 30.316348177384867 18.995412248397823 28 16.869956335300024 28.717665417603722 35.58315770386528 18.829220543230974 29 17.455814750416632 25.67650319744235 35.85653268628953 21.011149365851484 30 19.704281722216287 28.657811816898693 32.41844658776851 19.219459873116513 31 26.918369369708543 25.68825878268994 27.535422344371035 19.857949503230483 32 26.278112560112916 27.22270841000715 28.192966779330764 18.30621225054917 33 25.42126101317778 26.660899002619264 27.240918042057334 20.67692194214562 34 20.67868912162728 27.35063683770147 29.357230722184784 22.613443318486464 35 20.31964435128762 26.711302034791924 30.927331274697295 22.041722339223163 36 27.714983146486116 24.35572861962537 28.831610077225744 19.097678156662766 37 21.10918941013854 29.317200265230593 29.927799193090483 19.645811131540388 38 20.436278197077392 30.664559369163026 26.698470775077237 22.200691658682345 39 20.77288747138898 29.743167354201933 28.30890912010597 21.17503605430312 40 23.494497540931334 26.908841967285667 27.0900162811014 22.5066442106816 41 19.929328187511572 25.11377178336838 29.142479998217453 25.81442003090259 42 22.446252772743026 25.542274390726455 26.574691377470305 25.436781459060214 43 22.590469985224843 25.48818333180946 27.376145689349823 24.54520099361587 44 20.632819288994543 28.757772708448424 28.6243122406376 21.985095761919435 45 19.511812826496016 33.09012845858154 25.42710038885632 21.97095832606613 46 23.19054267008526 29.4721742223834 26.8615891246238 20.475693982907533 47 21.759050456047557 27.619555454476302 27.975142699743145 22.646251389732992 48 23.269374241745545 25.766629351007175 29.524267600147212 21.439728807100067 49 22.217595114593905 24.44185941088383 30.77619901206984 22.56434646245243 50 20.902659912455466 29.007867022049023 29.029380511391008 21.060092554104504 51 19.755453093294015 30.708815690095115 27.25344196620999 22.28228925040088 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1163.0 1 1730.0 2 2297.0 3 7530.5 4 12764.0 5 9055.5 6 5347.0 7 5468.0 8 5589.0 9 5795.0 10 6001.0 11 6030.5 12 6060.0 13 5696.0 14 5332.0 15 5090.5 16 4849.0 17 4383.0 18 3917.0 19 3798.0 20 3679.0 21 3997.5 22 4316.0 23 4408.0 24 4500.0 25 6140.0 26 9959.5 27 12139.0 28 13050.5 29 13962.0 30 18868.0 31 23774.0 32 26630.0 33 29486.0 34 31712.5 35 33939.0 36 35424.0 37 36909.0 38 45911.0 39 54913.0 40 69870.5 41 84828.0 42 97816.0 43 110804.0 44 118026.5 45 125249.0 46 121954.0 47 118659.0 48 113848.5 49 109038.0 50 103561.5 51 98085.0 52 90107.5 53 82130.0 54 74251.5 55 66373.0 56 63505.0 57 60637.0 58 55017.0 59 49397.0 60 43220.5 61 37044.0 62 33142.5 63 29241.0 64 24513.0 65 19785.0 66 16352.5 67 12920.0 68 10562.0 69 8204.0 70 6471.0 71 4738.0 72 3595.5 73 2453.0 74 2071.5 75 1250.5 76 811.0 77 586.0 78 361.0 79 278.0 80 195.0 81 129.5 82 64.0 83 62.5 84 61.0 85 37.0 86 13.0 87 10.5 88 8.0 89 5.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1301509.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.983107584684166 #Duplication Level Percentage of deduplicated Percentage of total 1 81.21607069746648 16.22949478352788 2 5.804738386927174 2.3199342337382345 3 1.8099882264444953 1.085075683681561 4 0.9648907890997708 0.7712606578420607 5 0.631206534221764 0.6306734040754569 6 0.48298599610896964 0.5790936673284832 7 0.3947267285634816 0.5521506678404133 8 0.31305134447576843 0.5004590956951444 9 0.29218926308446286 0.5254964531375766 >10 5.049179979653199 26.433484039252203 >50 2.470499329913201 35.08791180810998 >100 0.568149006224391 14.266721085948205 >500 0.0011618589084343373 0.1558671628428356 >1k 7.745726056228915E-4 0.2967977008452207 >5k 3.8728630281144576E-4 0.5655795561347778 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7308 0.5615020718258575 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 2214 0.17011023358271055 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1621 0.1245477365120026 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029811549516753244 0.0 2 0.0 0.0 0.0 0.10679910780486343 0.0 3 0.0 0.0 0.0 0.14921141536478041 0.0 4 0.0 0.0 0.0 0.2224341130180429 0.0 5 0.0 0.0 0.0 0.41882153715418025 0.0 6 0.0 0.0 0.0 0.6194348252682079 0.0 7 0.0 0.0 0.0 0.7631142005164774 0.0 8 0.0 0.0 0.0 1.0354135084736256 0.0 9 0.0 0.0 0.0 1.1256164959289563 0.0 10 7.683389050709599E-5 0.0 0.0 1.2804367853007548 0.0 11 7.683389050709599E-5 0.0 0.0 1.4848149340496302 0.0 12 7.683389050709599E-5 0.0 0.0 1.6515444764500284 0.0 13 7.683389050709599E-5 0.0 0.0 1.7393656132996391 0.0 14 7.683389050709599E-5 0.0 0.0 1.7664111427581368 0.0 15 7.683389050709599E-5 0.0 0.0 1.8283392585068563 0.0 16 7.683389050709599E-5 0.0 0.0 1.9157762259039315 0.0 17 7.683389050709599E-5 0.0 0.0 2.017811632497355 0.0 18 7.683389050709599E-5 0.0 0.0 2.140899525089723 0.0 19 7.683389050709599E-5 0.0 0.0 2.215812568334141 0.0 20 1.5366778101419198E-4 0.0 0.0 2.3040178746362874 0.0 21 1.5366778101419198E-4 0.0 0.0 2.426106926652063 0.0 22 1.5366778101419198E-4 0.0 0.0 2.559721062243903 0.0 23 1.5366778101419198E-4 0.0 0.0 2.7056286203168782 0.0 24 1.5366778101419198E-4 0.0 0.0 2.8111983858736282 0.0 25 1.5366778101419198E-4 0.0 0.0 2.9289847400210065 0.0 26 1.5366778101419198E-4 0.0 0.0 3.0285614621182027 0.0 27 1.5366778101419198E-4 0.0 0.0 3.122375642427367 0.0 28 1.5366778101419198E-4 0.0 0.0 3.2188790089042794 0.0 29 1.5366778101419198E-4 0.0 0.0 3.3211449171692244 0.0 30 1.5366778101419198E-4 0.0 0.0 3.4573714050383058 0.0 31 1.5366778101419198E-4 0.0 0.0 3.577846945353432 0.0 32 1.5366778101419198E-4 0.0 0.0 3.695479631719796 0.0 33 1.5366778101419198E-4 0.0 0.0 3.798206543327783 0.0 34 1.5366778101419198E-4 0.0 0.0 3.9279789843942683 0.0 35 1.5366778101419198E-4 0.0 0.0 4.063206631686757 0.0 36 1.5366778101419198E-4 0.0 0.0 4.173616932345454 0.0 37 1.5366778101419198E-4 0.0 0.0 4.291787455945368 0.0 38 1.5366778101419198E-4 0.0 0.0 4.426784601566336 0.0 39 1.5366778101419198E-4 0.0 0.0 4.644224511701418 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGAC 25 3.8910905E-5 45.000004 8 CGCGATT 30 2.1657233E-6 45.000004 23 GTTCGCG 30 2.1657233E-6 45.000004 1 CGGACCG 25 3.8910905E-5 45.000004 6 GCGGTAT 20 7.033631E-4 45.0 36 GTTCGAC 20 7.033631E-4 45.0 38 TCGACTC 20 7.033631E-4 45.0 24 CGGTCTA 180 0.0 42.5 31 CGTTTTT 4535 0.0 42.32084 1 TACGTAG 80 0.0 42.1875 1 GTATGCG 65 0.0 41.53846 1 TAGTACG 65 0.0 41.53846 1 TTAGGCG 55 6.184564E-11 40.909092 1 TTTAGCG 160 0.0 40.78125 1 TACGCGG 50 1.0822987E-9 40.500004 2 ACGGTCT 190 0.0 40.26316 30 CACGACG 185 0.0 40.135136 26 GGCGTAG 90 0.0 40.0 1 TACGGGA 265 0.0 39.905663 4 TAAACGG 120 0.0 39.375004 2 >>END_MODULE