##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547698_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1079721 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.623714830034796 31.0 31.0 33.0 30.0 34.0 2 31.997853149100553 33.0 31.0 34.0 30.0 34.0 3 32.040507686707954 33.0 31.0 34.0 30.0 34.0 4 35.739419720464824 37.0 35.0 37.0 33.0 37.0 5 35.662427608613704 37.0 35.0 37.0 33.0 37.0 6 35.7163971062895 37.0 35.0 37.0 33.0 37.0 7 36.09457813638894 37.0 35.0 37.0 35.0 37.0 8 36.00688418582208 37.0 35.0 37.0 35.0 37.0 9 37.890628227106816 39.0 38.0 39.0 35.0 39.0 10 37.47655366525241 39.0 37.0 39.0 35.0 39.0 11 37.07425621989384 39.0 37.0 39.0 33.0 39.0 12 35.652185147829854 35.0 35.0 39.0 32.0 39.0 13 35.06791291453996 35.0 35.0 39.0 31.0 39.0 14 35.817854797674585 36.0 35.0 40.0 31.0 41.0 15 36.252473555668544 36.0 35.0 40.0 32.0 41.0 16 36.50570934528457 36.0 35.0 40.0 32.0 41.0 17 36.4746244631715 36.0 35.0 40.0 32.0 41.0 18 36.43543100486144 36.0 35.0 40.0 32.0 41.0 19 36.354986149199654 36.0 35.0 40.0 32.0 41.0 20 36.167515497058965 36.0 35.0 40.0 32.0 41.0 21 35.936384491919675 35.0 35.0 40.0 31.0 41.0 22 35.8687049710064 35.0 35.0 40.0 31.0 41.0 23 35.8779758845109 35.0 35.0 40.0 31.0 41.0 24 35.86300535045628 35.0 35.0 40.0 31.0 41.0 25 35.79102379225744 35.0 35.0 40.0 31.0 41.0 26 35.74367544949112 35.0 35.0 40.0 31.0 41.0 27 35.63088612706431 35.0 34.0 40.0 31.0 41.0 28 35.74708095887734 36.0 35.0 40.0 31.0 41.0 29 35.759243360090245 36.0 35.0 40.0 31.0 41.0 30 35.788239739710534 36.0 35.0 40.0 31.0 41.0 31 35.52741680489682 35.0 35.0 40.0 31.0 41.0 32 35.264992530477784 35.0 34.0 40.0 30.0 41.0 33 35.132131356155895 35.0 34.0 40.0 30.0 41.0 34 35.008223420679975 35.0 34.0 40.0 30.0 41.0 35 34.901045733110685 35.0 34.0 40.0 29.0 41.0 36 34.733879400326565 35.0 34.0 40.0 27.0 41.0 37 34.44922901379152 35.0 34.0 40.0 27.0 41.0 38 34.62025652923302 35.0 34.0 40.0 27.0 41.0 39 34.629124560881934 35.0 34.0 40.0 27.0 41.0 40 34.48425287643752 35.0 34.0 40.0 27.0 41.0 41 34.499039103620284 35.0 34.0 40.0 27.0 41.0 42 34.51328259800449 35.0 34.0 40.0 27.0 41.0 43 34.365811167885035 35.0 34.0 40.0 27.0 41.0 44 34.27092369232422 35.0 34.0 40.0 27.0 41.0 45 34.257376674159346 35.0 34.0 40.0 27.0 41.0 46 34.080388359585484 35.0 34.0 39.0 26.0 41.0 47 33.96384621582798 35.0 33.0 39.0 25.0 41.0 48 33.8860094413279 35.0 34.0 39.0 24.0 41.0 49 34.06413508674926 35.0 34.0 39.0 26.0 41.0 50 33.86888001622641 35.0 34.0 39.0 24.0 41.0 51 33.21347737054295 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 2.0 11 0.0 12 2.0 13 3.0 14 8.0 15 20.0 16 71.0 17 188.0 18 447.0 19 863.0 20 1574.0 21 2503.0 22 3965.0 23 5986.0 24 8689.0 25 12676.0 26 16793.0 27 19528.0 28 20980.0 29 22810.0 30 26735.0 31 32688.0 32 41983.0 33 57640.0 34 121787.0 35 254653.0 36 51663.0 37 63201.0 38 102441.0 39 209769.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.560302152130042 25.39313396701555 28.300181250526755 15.746382630327648 2 29.556153858265237 25.640049605407324 31.099145056917482 13.70465147940996 3 27.197581597468236 25.584664927328447 32.542388265116635 14.67536521008668 4 24.965801350534072 27.544986158461306 32.550260669191395 14.938951821813228 5 22.650481003888967 31.710877161785312 31.885644532244907 13.752997302080816 6 20.056477552997485 39.540214555426815 29.06593462570423 11.337373265871461 7 87.64190008344748 4.2824025836304 6.631898425611801 1.4437989073103146 8 90.10411022847569 2.649480745488881 5.771490968500196 1.4749180575352336 9 88.78247250910188 2.9931806457408903 6.6674631687259955 1.5568836764312262 10 61.4678236322161 17.575558871226917 11.49259855092195 9.464018945635031 11 56.10569767560324 19.05242187565121 16.154543627474137 8.68733682127142 12 51.11950216768961 20.433982482511688 18.257123831063765 10.189391518734931 13 20.49881404548027 48.90068823334917 19.796595602012 10.803902119158561 14 11.202894080970918 51.57313787543264 25.693767186152723 11.53020085744373 15 9.494952862822895 22.98093674199168 57.42400120031008 10.100109194875342 16 11.080825509552932 17.45052657121608 55.82034618202295 15.648301737208037 17 12.363471674627057 17.23658241341976 27.8320973658936 42.56784854605959 18 19.87059620031471 22.755322902861018 38.290076788355506 19.08400410846876 19 30.526682355904907 23.49301347292495 26.267341285387612 19.71296288578253 20 33.41001981067331 22.86423992864823 25.03609728809572 18.68964297258273 21 19.889489970094125 29.11659586133825 30.403595002783124 20.590319165784493 22 20.616251790971926 23.30240867779732 26.67652106423789 29.40481846699286 23 15.501319322306411 30.54955863598096 26.490269245481006 27.45885279623162 24 17.614272575971015 22.84645755709114 43.656000022227964 15.883269844709883 25 11.94864228814666 24.249319963212717 41.83914177829273 21.962895970347894 26 12.743106784067365 38.744360811728214 27.898873875751235 20.613658528453183 27 14.362599227022535 40.11953087881036 30.431657807896666 15.086212086270434 28 10.178277536511747 30.99458100750101 44.56623516630685 14.260906289680388 29 10.996174011619669 23.98656690015291 44.41795612014585 20.59930296808157 30 15.289227494880622 33.50087661534785 34.63200215611255 16.577893733658975 31 31.203801722852475 27.18378173620778 24.535227155904163 17.07718938503558 32 31.831741718462453 27.383370333632485 26.34652840872781 14.43835953917725 33 29.14734454548907 29.84215366747521 23.584240743673597 17.42626104336213 34 16.8117504429385 30.69811553169754 26.725793052094016 25.764340973269945 35 16.151672515399813 27.695951083659576 32.90544501774069 23.24693138319992 36 32.96925779900548 21.651426618543123 29.339338588394593 16.039976994056797 37 17.24899302690232 33.75001505018426 32.81421774699205 16.18677417592137 38 17.212224269047283 35.633186721384504 23.670559338940336 23.484029670627876 39 17.436541476918574 33.494763925125106 30.766559138888656 18.302135459067667 40 23.932756702888987 26.867866791513734 24.626361810134284 24.573014695462994 41 14.833646840248546 22.94000024080295 29.076029826223625 33.15032309272488 42 22.110156234805103 23.141163319042604 25.154646431809695 29.594034014342597 43 22.300668413414208 24.051120613565914 26.3684785236186 27.27973244940128 44 16.813139690716397 32.70706043505683 29.327298440986144 21.152501433240626 45 13.917669472021013 44.44444444444444 21.21853701095005 20.41934907258449 46 23.347790771875328 35.75256941376522 23.62063903545453 17.279000778904923 47 20.637460973714504 29.265337990091883 25.47019091042964 24.62701012576397 48 22.955004116804247 24.1013187666073 32.09894037441154 20.844736742176913 49 21.028673147970633 21.361999998147667 34.402035340611135 23.207291513270558 50 18.559887230127043 35.18881266549414 27.465150719491426 18.786149384887395 51 16.167139473993743 37.087636528325376 24.016759885192563 22.728464112488318 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1303.0 1 1310.0 2 1317.0 3 4323.5 4 7330.0 5 5517.5 6 3705.0 7 4191.0 8 4677.0 9 5404.0 10 6131.0 11 6432.5 12 6734.0 13 6246.0 14 5758.0 15 5589.0 16 5420.0 17 4862.0 18 4304.0 19 4087.0 20 3870.0 21 3816.5 22 3763.0 23 3526.0 24 3289.0 25 4000.0 26 5543.5 27 6376.0 28 8393.5 29 10411.0 30 12673.5 31 14936.0 32 17647.0 33 20358.0 34 21755.0 35 23152.0 36 25736.5 37 28321.0 38 35086.0 39 41851.0 40 67297.5 41 92744.0 42 119493.0 43 146242.0 44 151116.5 45 155991.0 46 140223.0 47 124455.0 48 110245.0 49 96035.0 50 85753.5 51 75472.0 52 64912.5 53 54353.0 54 48011.0 55 41669.0 56 35573.0 57 29477.0 58 26095.5 59 22714.0 60 17798.5 61 12883.0 62 11132.0 63 9381.0 64 7248.5 65 5116.0 66 4029.0 67 2942.0 68 2018.5 69 1095.0 70 969.0 71 843.0 72 558.0 73 273.0 74 216.0 75 118.5 76 78.0 77 51.0 78 24.0 79 31.5 80 39.0 81 22.0 82 5.0 83 4.5 84 4.0 85 2.5 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 3.0 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1079721.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.428190493919757 #Duplication Level Percentage of deduplicated Percentage of total 1 82.80111034930194 14.430735242757049 2 7.053523467921967 2.4586030130455505 3 2.055260236182263 1.0745840073228898 4 0.9313662763901399 0.649281155381603 5 0.5572470790023888 0.4855904122516992 6 0.404050560491021 0.4225122082447537 7 0.2762153148109363 0.33697531867041086 8 0.23371427782539037 0.3258573564071831 9 0.1766346977566698 0.2770580844305264 >10 2.2016420816038544 9.601188212275114 >50 1.3964599950270078 18.364759663861307 >100 1.9063551579621554 50.11305531754391 >500 0.004815379293196576 0.4858229345691304 >1k 0.001605126431065525 0.9739770732388804 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4969 0.46021148055840355 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4466 0.4136253717395512 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07714955993261222 0.0 2 0.0 0.0 0.0 0.2749784435053129 0.0 3 0.0 0.0 0.0 0.3663909472910131 0.0 4 0.0 0.0 0.0 0.5504199696032587 0.0 5 0.0 0.0 0.0 0.9041224538561351 0.0 6 0.0 0.0 0.0 1.2439324603300297 0.0 7 0.0 0.0 0.0 1.439816397013673 0.0 8 0.0 0.0 0.0 1.8502001906047951 0.0 9 0.0 0.0 0.0 1.94818846720588 0.0 10 0.0 0.0 0.0 2.1249007845545282 0.0 11 0.0 0.0 0.0 2.40099062628216 0.0 12 0.0 0.0 0.0 2.5970597960028563 0.0 13 0.0 0.0 0.0 2.6782844827506365 0.0 14 0.0 0.0 0.0 2.708292234753237 0.0 15 0.0 0.0 0.0 2.7595091694984166 0.0 16 0.0 0.0 0.0 2.873520103804594 0.0 17 0.0 0.0 0.0 2.9866974894440323 0.0 18 0.0 0.0 0.0 3.1542407714585528 0.0 19 0.0 0.0 0.0 3.2333352782802223 0.0 20 0.0 0.0 0.0 3.3212283543619137 0.0 21 0.0 0.0 0.0 3.465154424152165 0.0 22 0.0 0.0 0.0 3.5961141813487 0.0 23 0.0 0.0 0.0 3.7696775370674462 0.0 24 0.0 0.0 0.0 3.8846146365588887 0.0 25 0.0 0.0 0.0 3.979268718493018 0.0 26 0.0 0.0 0.0 4.078275776797895 0.0 27 0.0 0.0 0.0 4.161074944360626 0.0 28 0.0 0.0 0.0 4.245911675330942 0.0 29 0.0 0.0 0.0 4.3433442528208674 0.0 30 0.0 0.0 0.0 4.475600641276774 0.0 31 0.0 0.0 0.0 4.604708068102778 0.0 32 0.0 0.0 0.0 4.701399713444491 0.0 33 9.261651852654528E-5 0.0 0.0 4.8051302141942225 0.0 34 9.261651852654528E-5 0.0 0.0 4.910713045314484 0.0 35 9.261651852654528E-5 0.0 0.0 5.062141053105385 0.0 36 9.261651852654528E-5 0.0 0.0 5.17300302578166 0.0 37 9.261651852654528E-5 0.0 0.0 5.2883105913472095 0.0 38 9.261651852654528E-5 0.0 0.0 5.401395360468121 0.0 39 9.261651852654528E-5 0.0 0.0 5.51105331840355 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 30 2.1653796E-6 45.000004 16 CTATGCG 75 0.0 45.000004 1 GATCGCT 30 2.1653796E-6 45.000004 9 GTCCTCG 30 2.1653796E-6 45.000004 37 CCGTCTA 30 2.1653796E-6 45.000004 40 ATCCGGC 30 2.1653796E-6 45.000004 34 GCCGATC 30 2.1653796E-6 45.000004 9 GTTCGGC 30 2.1653796E-6 45.000004 18 AACGCCG 30 2.1653796E-6 45.000004 13 CGGGCAA 75 0.0 45.000004 6 ACGCTAG 30 2.1653796E-6 45.000004 1 ACGTCGT 30 2.1653796E-6 45.000004 10 CTCGACT 30 2.1653796E-6 45.000004 23 TTCGGCG 30 2.1653796E-6 45.000004 1 ACCGTGC 30 2.1653796E-6 45.000004 33 GCGGAGT 30 2.1653796E-6 45.000004 16 TATACGC 30 2.1653796E-6 45.000004 17 TTACCGG 30 2.1653796E-6 45.000004 2 GCTCGAC 30 2.1653796E-6 45.000004 22 TCGACTA 30 2.1653796E-6 45.000004 24 >>END_MODULE