SRR1547697_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547697_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1825288
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10272	0.5627605068350858	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3537	0.19377763947388027	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAACG	65	0.0	45.000004	1
ACGTTGT	35	1.2124474E-7	45.0	29
ATTACGA	25	3.891711E-5	45.0	11
CCAATCG	70	0.0	45.0	24
GCGCCTA	20	7.0343795E-4	45.0	19
TATATCG	25	3.891711E-5	45.0	28
CGTTCGA	35	1.2124474E-7	45.0	38
ATCGTAG	40	6.8193913E-9	45.0	1
AATGCGT	45	3.8562575E-10	45.0	26
ATATCGG	35	1.2124474E-7	45.0	2
TACGATA	25	3.891711E-5	45.0	13
TCGTCCC	25	3.891711E-5	45.0	38
CTCGCTA	35	1.2124474E-7	45.0	41
GCGATAC	35	1.2124474E-7	45.0	9
CGTCGCG	25	3.891711E-5	45.0	39
GCGTGCC	20	7.0343795E-4	45.0	38
CGCCGAT	25	3.891711E-5	45.0	30
TAATGCG	95	0.0	45.0	1
CCGTTCG	25	3.891711E-5	45.0	41
TATCCGT	20	7.0343795E-4	45.0	34